Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.8e-68 261.5 147 100.0
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.2e-61 240.0 133 99.2
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 3.1e-54 215.3 132 91.7
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 4.8e-39 164.9 126 77.0
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 6.3e-39 164.5 123 78.0
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.1e-38 163.7 122 76.2
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 2.4e-38 162.5 125 76.8
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 4.1e-38 161.8 125 75.2
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 4.1e-38 161.8 126 76.2
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 5.3e-38 161.4 127 74.0
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 5.3e-38 161.4 121 75.2
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 7.0e-38 161.0 124 75.8
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 7.0e-38 161.0 118 76.3
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 7.0e-38 161.0 125 76.8
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 7.0e-38 161.0 121 75.2
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.2e-37 160.2 124 71.0
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 2.6e-37 159.1 130 72.3
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 3.5e-37 158.7 127 72.4
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 3.5e-37 158.7 126 73.8
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 7.7e-37 157.5 123 71.5
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.0e-36 157.1 122 75.4
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.0e-36 157.1 122 75.4
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.0e-36 157.1 119 72.3
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 1.3e-36 156.8 125 75.2
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 1.7e-36 156.4 124 75.0
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 2.9e-36 155.6 121 75.2
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 3.8e-36 155.2 125 74.4
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 5.0e-36 154.8 129 72.1
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 6.5e-36 154.5 119 73.1
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 1.1e-35 153.7 119 73.1
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 1.1e-35 153.7 125 71.2
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.5e-35 153.3 123 72.4
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 1.9e-35 152.9 100 81.0
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 1.9e-35 152.9 118 73.7
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 2.5e-35 152.5 122 75.4
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 2.5e-35 152.5 132 70.5
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 3.2e-35 152.1 121 72.7
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 4.2e-35 151.8 100 80.0
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 4.2e-35 151.8 130 69.2
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 4.2e-35 151.8 123 70.7
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 5.5e-35 151.4 123 74.0
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 7.2e-35 151.0 130 66.9
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 1.2e-34 150.2 117 76.1
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 1.2e-34 150.2 121 76.0
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.6e-34 149.8 126 70.6
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.6e-34 149.8 126 70.6
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 2.1e-34 149.4 107 79.4
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 3.6e-34 148.7 139 65.5
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 6.1e-34 147.9 99 78.8
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 8.0e-34 147.5 131 69.5
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 1.4e-33 146.7 135 67.4
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 2.3e-33 146.0 126 66.7
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 4.0e-33 145.2 122 69.7
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 4.0e-33 145.2 135 65.2
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 6.7e-33 144.4 115 73.0
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 6.7e-33 144.4 122 69.7
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 6.7e-33 144.4 122 69.7
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 8.8e-33 144.1 123 68.3
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 2.6e-32 142.5 93 79.6
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 3.3e-32 142.1 129 65.9
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 3.3e-32 142.1 130 66.2
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 3.3e-32 142.1 111 71.2
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 3.3e-32 142.1 94 79.8
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 4.4e-32 141.7 122 68.9
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 5.7e-32 141.4 137 65.7
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 7.5e-32 141.0 125 66.4
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 9.7e-32 140.6 124 66.1
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 9.7e-32 140.6 95 78.9
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 1.7e-31 139.8 116 67.2
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 3.7e-31 138.7 161 54.0
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 4.8e-31 138.3 118 68.6
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 4.8e-31 138.3 131 64.9
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 8.2e-31 137.5 127 66.1
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 8.2e-31 137.5 118 68.6
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 8.2e-31 137.5 118 68.6
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 8.2e-31 137.5 118 68.6
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 1.1e-30 137.1 130 63.1
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.1e-30 137.1 118 68.6
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.1e-30 137.1 82 87.8
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 1.8e-30 136.3 108 72.2
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 4.1e-30 135.2 130 60.0
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 7.0e-30 134.4 118 65.3
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 7.0e-30 134.4 128 60.9
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 1.2e-29 133.7 111 70.3
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 2.0e-29 132.9 125 63.2
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 2.7e-29 132.5 154 57.8
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 3.5e-29 132.1 127 59.8
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 3.5e-29 132.1 78 85.9
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 4.5e-29 131.7 127 59.1
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 4.5e-29 131.7 127 59.1
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 4.5e-29 131.7 127 59.1
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 4.5e-29 131.7 116 66.4
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 1.3e-28 130.2 116 63.8
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.3e-28 130.2 121 64.5
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.3e-28 130.2 77 85.7
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 1.7e-28 129.8 91 76.9
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 1.7e-28 129.8 91 76.9
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 6.5e-28 127.9 128 59.4
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 6.5e-28 127.9 189 48.7
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 1.9e-27 126.3 89 76.4
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 2.5e-27 125.9 119 60.5
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 2.5e-27 125.9 122 62.3
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 2.5e-27 125.9 118 63.6
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 2.5e-27 125.9 127 61.4
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 3.2e-27 125.6 121 62.0
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 4.2e-27 125.2 120 61.7
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 1.6e-26 123.2 128 56.2
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 3.6e-26 122.1 115 62.6
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 3.6e-26 122.1 107 67.3
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 4.7e-26 121.7 185 47.6
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 4.0e-25 118.6 103 67.0
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 4.0e-25 118.6 115 67.0
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 6.8e-25 117.9 135 57.0
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.5e-24 116.7 102 65.7
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 4.4e-24 115.2 156 50.6
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 8.3e-23 110.9 115 60.9
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 5.4e-22 108.2 129 57.4
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 3.8e-20 102.1 119 52.9
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 7.2e-19 97.8 80 70.0
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 1.3e-15 87.0 247 33.6
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.8e-14 83.2 77 64.9
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 4.1e-14 82.0 77 57.1
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 5.4e-14 81.6 92 55.4
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 2.7e-13 79.3 86 55.8
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 7.8e-13 77.8 75 64.0
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 1.0e-12 77.4 86 59.3
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 6.6e-12 74.7 46 89.1
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 3.3e-11 72.4 54 75.9
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 2.1e-10 69.7 83 54.2
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 1.7e-07 60.1 67 47.8
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 4.1e-06 55.5 42 64.3
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 7.0e-06 54.7 86 45.3


User provided reference genes

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