Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 0.0e+00 1245.7 619 100.0
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 5.6e-206 721.5 735 52.7
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 3.8e-202 708.8 762 50.7
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.4e-201 706.1 734 53.1
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 4.2e-201 705.3 741 52.8
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 1.3e-197 693.7 774 51.2
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 3.7e-197 692.2 875 46.5
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 3.7e-197 692.2 774 51.0
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 6.2e-197 691.4 774 51.4
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 1.4e-196 690.3 774 51.0
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 1.4e-196 690.3 774 51.0
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 3.1e-196 689.1 773 51.0
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 5.3e-196 688.3 772 50.8
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.2e-195 687.2 762 50.3
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 2.6e-195 686.0 772 51.2
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 7.6e-195 684.5 774 50.6
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 1.4e-193 680.2 773 50.5
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 3.2e-193 679.1 762 50.7
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 3.2e-193 679.1 761 49.5
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 4.2e-193 678.7 770 50.1
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 1.6e-192 676.8 777 49.7
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 1.6e-192 676.8 792 49.4
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 2.1e-192 676.4 773 50.3
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 6.0e-192 674.9 777 50.1
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 1.0e-191 674.1 776 49.1
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 1.3e-191 673.7 774 49.4
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 5.1e-191 671.8 775 48.6
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 2.5e-190 669.5 780 49.7
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 3.3e-190 669.1 763 50.1
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 8.2e-189 664.5 785 48.2
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 8.2e-189 664.5 786 47.6
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 2.4e-188 662.9 770 49.5
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 1.2e-187 660.6 787 47.4
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 1.7e-186 656.8 746 48.4
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 2.2e-186 656.4 771 48.2
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 3.8e-186 655.6 770 48.8
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 5.0e-186 655.2 774 48.6
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 3.2e-185 652.5 765 49.2
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 3.2e-185 652.5 770 48.6
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 7.2e-185 651.4 773 49.4
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 1.2e-184 650.6 784 46.9
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 2.7e-184 649.4 771 48.0
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 3.6e-184 649.0 780 47.7
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 1.3e-183 647.1 756 48.9
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 1.8e-183 646.7 787 46.3
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 1.8e-183 646.7 769 46.7
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 2.3e-183 646.4 748 47.9
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 3.0e-183 646.0 768 46.9
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 1.5e-182 643.7 762 48.8
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 1.5e-182 643.7 780 46.5
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 1.9e-182 643.3 771 47.2
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 4.3e-182 642.1 780 46.2
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 1.3e-181 640.6 775 47.4
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 1.3e-181 640.6 766 47.9
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 1.3e-181 640.6 774 47.4
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 1.6e-181 640.2 771 47.2
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 2.2e-181 639.8 774 47.3
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 2.8e-181 639.4 782 46.3
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 3.7e-181 639.0 693 50.5
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 6.3e-181 638.3 771 46.8
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 8.2e-181 637.9 791 45.8
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 1.4e-180 637.1 869 45.0
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 4.1e-180 635.6 800 45.6
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 4.1e-180 635.6 738 48.4
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 2.6e-179 632.9 774 46.8
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 7.7e-179 631.3 780 47.2
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 8.5e-178 627.9 875 44.5
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 3.2e-177 625.9 772 46.2
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 2.7e-176 622.9 785 45.9
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 3.6e-176 622.5 769 46.7
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 1.4e-175 620.5 793 45.3
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 8.8e-175 617.8 828 45.0
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 1.5e-174 617.1 776 44.3
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 2.6e-174 616.3 702 49.3
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 5.7e-174 615.1 767 47.1
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 1.3e-173 614.0 787 45.5
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 2.2e-173 613.2 803 44.5
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 2.4e-172 609.8 773 47.2
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 5.3e-172 608.6 771 47.2
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 1.2e-171 607.4 731 46.2
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 2.2e-170 603.2 764 45.7
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 1.0e-167 594.3 784 45.2
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 6.7e-167 591.7 691 49.9
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 4.4e-166 589.0 772 44.8
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 2.9e-162 576.2 769 44.2
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 6.3e-157 558.5 776 43.3
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 2.9e-154 549.7 476 60.7
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 3.8e-154 549.3 752 44.4
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 1.8e-151 540.4 770 41.2
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 1.8e-148 530.4 443 61.2
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.0e-143 513.1 434 59.7
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 1.3e-114 417.9 808 34.4
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 6.2e-112 409.1 784 34.3
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 8.1e-112 408.7 427 54.3
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 7.8e-107 392.1 543 43.1
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 4.9e-93 346.3 699 33.2
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 5.6e-89 332.8 632 37.2
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 3.1e-87 327.0 484 41.9
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 1.9e-84 317.8 379 49.6
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.0e-82 312.0 309 54.4
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 2.3e-82 310.8 464 36.2
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 7.9e-75 285.8 405 43.2
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 6.9e-71 272.7 181 69.6
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 2.6e-70 270.8 460 39.1
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 3.9e-66 256.9 604 31.6
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 1.1e-65 255.4 316 46.5
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 5.0e-61 240.0 194 62.4
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.1e-57 228.8 260 50.0
Hund23621 Selenicereus undatus HOM05D004656 ORTHO05D005404 6.3e-48 196.4 352 36.1
arahy.Tifrunner.gnm1.ann1.QWV34J Arachis hypogaea HOM05D004656 ORTHO05D005404 1.6e-43 181.8 194 51.5
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.1e-36 159.1 119 64.7
QL02p031126 Quercus lobata HOM05D004656 ORTHO05D005404 1.0e-34 152.5 174 51.1
Os02g0785900 Oryza sativa ssp. japonica HOM05D004656 ORTHO05D005404 1.5e-33 148.7 110 60.9
PRCOL_00000091 Prasinoderma coloniale HOM05D004656 ORTHO05D005404 2.6e-33 147.9 439 26.2
SEGI_08767 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 8.6e-29 132.9 168 45.2
SHI02118 Sapria himalayana HOM05D004656 ORTHO05D005404 2.1e-27 128.3 225 36.4
TAR369G0180 Trochodendron aralioides HOM05D004656 ORTHO05D005404 3.0e-26 124.4 71 77.5
Cre12.g556650 Chlamydomonas reinhardtii HOM05D004656 ORTHO05D005404 3.7e-24 117.5 483 23.8
Zm00001eb125490 Zea mays HOM05D004656 ORTHO05D005404 8.3e-24 116.3 109 50.5
Zm00001eb374130 Zea mays HOM05D004656 ORTHO05D005404 4.1e-23 114.0 61 78.7
SEGI_33901 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 9.2e-23 112.8 392 26.3
SHI02121 Sapria himalayana HOM05D004656 ORTHO05D005404 3.5e-22 110.9 198 35.9
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.9e-22 110.2 80 67.5
Zm00001eb384090 Zea mays HOM05D004656 ORTHO05D005404 5.9e-22 110.2 109 47.7
MCO05G135 Micromonas commoda HOM05D004656 ORTHO05D005404 1.3e-21 109.0 210 35.2
CSS0005991 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.9e-21 107.8 105 49.5
Hma1.2p1_0144F.1_g064710 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 5.0e-21 107.1 52 90.4
CSS0038861 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.5e-20 104.8 80 63.8
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.5e-20 104.8 76 68.4
RcHm_v2.0_Chr5g0006431 Rosa chinensis HOM05D004656 ORTHO05D005404 5.6e-20 103.6 81 64.2
EL10Ac9g22460 Beta vulgaris HOM05D004656 ORTHO05D005404 7.3e-20 103.2 88 58.0
Eucgr.E01958 Eucalyptus grandis HOM05D004656 ORTHO05D005404 7.3e-20 103.2 93 57.0
EL10Ac6g14063 Beta vulgaris HOM05D004656 ORTHO05D005404 1.6e-19 102.1 106 49.1
Haze_06207 Corylus avellana HOM05D004656 ORTHO05D005404 1.6e-19 102.1 56 82.1
Hund23620 Selenicereus undatus HOM05D004656 ORTHO05D005404 8.9e-18 96.3 90 54.4
CSS0002071 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.4e-17 94.4 75 64.0
MELO3C032683.2 Cucumis melo HOM05D004656 ORTHO05D005404 3.2e-15 87.8 56 67.9
SHI02114 Sapria himalayana HOM05D004656 ORTHO05D005404 4.1e-15 87.4 69 55.1
Hma1.2p1_1241F.1_g269830 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 1.6e-14 85.5 52 75.0
EL10Ac3g05965 Beta vulgaris HOM05D004656 ORTHO05D005404 2.5e-12 78.2 57 64.9
MELO3C008912.2 Cucumis melo HOM05D004656 ORTHO05D005404 9.5e-12 76.3 56 62.5
SGA_v2.0_scaffold159G37668 Striga asiatica HOM05D004656 ORTHO05D005404 2.1e-11 75.1 98 44.9
CSS0033314 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 8.0e-11 73.2 82 47.6
CSS0037848 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 8.0e-11 73.2 82 47.6
Zm00001eb266270 Zea mays HOM05D004656 ORTHO05D005404 1.8e-10 72.0 79 44.3
Eucgr.L00388 Eucalyptus grandis HOM05D004656 ORTHO05D005404 6.8e-10 70.1 60 58.3
Eucgr.C00011 Eucalyptus grandis HOM05D004656 ORTHO05D005404 5.8e-09 67.0 57 57.9
Eucgr.E03560 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.2e-08 65.1 57 56.1
CSS0023832 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 6.4e-08 63.5 80 48.8
Eucgr.E03557 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.1e-07 62.8 63 47.6
Actinidia29288 Actinidia chinensis HOM05D004656 ORTHO05D005404 3.2e-07 61.2 31 87.1


User provided reference genes

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