Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 4.3e-130 468.0 239 100.0
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 1.7e-33 147.1 246 38.2
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.4e-32 144.1 246 40.2
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 3.2e-32 142.9 239 38.5
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 3.2e-32 142.9 246 39.8
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 5.4e-32 142.1 243 37.4
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.2e-31 141.0 246 39.0
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 1.6e-31 140.6 246 40.7
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 2.1e-31 140.2 243 37.0
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 2.7e-31 139.8 243 37.0
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 2.7e-31 139.8 246 38.6
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 3.5e-31 139.4 246 39.4
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 3.5e-31 139.4 245 39.2
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 7.9e-31 138.3 247 37.2
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.0e-30 137.9 247 36.8
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.8e-30 137.1 250 36.8
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 1.8e-30 137.1 245 37.1
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 3.0e-30 136.3 239 38.1
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 3.9e-30 136.0 246 36.6
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.1e-29 134.4 247 37.2
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 1.1e-29 134.4 245 37.1
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 5.6e-29 132.1 241 37.8
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 9.6e-29 131.3 243 35.8
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 9.6e-29 131.3 248 35.5
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 1.3e-28 131.0 243 36.6
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 2.1e-28 130.2 249 34.9
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 4.8e-28 129.0 236 36.9
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 4.8e-28 129.0 246 36.2
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 6.2e-28 128.6 206 36.4
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 1.1e-27 127.9 249 34.9
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 1.4e-27 127.5 249 34.5
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 1.4e-27 127.5 250 35.6
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 2.4e-27 126.7 220 35.9
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 4.0e-27 125.9 242 34.7
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 5.3e-27 125.6 231 35.1
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 5.3e-27 125.6 245 34.3
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 6.9e-27 125.2 208 39.4
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 6.9e-27 125.2 249 34.1
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 6.9e-27 125.2 244 35.7
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 9.0e-27 124.8 210 36.2
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 1.2e-26 124.4 208 36.1
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 1.5e-26 124.0 243 36.2
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 2.0e-26 123.6 246 33.7
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 3.4e-26 122.9 244 35.7
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 3.4e-26 122.9 226 35.4
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 4.5e-26 122.5 250 33.2
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 5.8e-26 122.1 247 32.8
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 5.8e-26 122.1 247 32.8
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 5.8e-26 122.1 247 32.8
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 5.8e-26 122.1 247 32.8
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 5.8e-26 122.1 251 33.5
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 7.6e-26 121.7 197 35.5
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 7.6e-26 121.7 205 36.1
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 9.9e-26 121.3 247 32.8
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 9.9e-26 121.3 246 34.6
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 1.3e-25 120.9 218 34.9
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 1.7e-25 120.6 252 35.7
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 1.7e-25 120.6 247 32.8
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 2.2e-25 120.2 247 36.0
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 2.9e-25 119.8 217 35.9
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 8.4e-25 118.2 204 35.3
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 8.4e-25 118.2 251 34.7
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.1e-24 117.9 246 33.7
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 1.1e-24 117.9 205 35.1
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 1.1e-24 117.9 203 37.4
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.9e-24 117.1 204 34.8
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 1.9e-24 117.1 215 34.4
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 2.4e-24 116.7 86 66.3
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 3.2e-24 116.3 241 34.0
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 3.2e-24 116.3 251 34.3
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 4.2e-24 115.9 234 34.2
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 5.5e-24 115.5 237 35.0
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 7.1e-24 115.2 220 34.1
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 1.2e-23 114.4 230 35.2
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 1.2e-23 114.4 84 63.1
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 2.1e-23 113.6 85 63.5
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 2.7e-23 113.2 240 32.9
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.7e-23 113.2 215 34.9
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 3.5e-23 112.8 243 32.9
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 3.5e-23 112.8 226 35.4
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 4.6e-23 112.5 244 33.2
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 7.9e-23 111.7 236 33.5
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 7.9e-23 111.7 209 36.8
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 1.0e-22 111.3 85 61.2
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 1.0e-22 111.3 83 61.4
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 1.3e-22 110.9 241 34.0
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 1.3e-22 110.9 94 58.5
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 1.3e-22 110.9 255 31.8
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 1.8e-22 110.5 247 34.8
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.8e-22 110.5 247 34.8
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 2.3e-22 110.2 86 59.3
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 3.9e-22 109.4 251 31.5
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 3.9e-22 109.4 210 36.2
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 5.1e-22 109.0 83 63.9
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 6.7e-22 108.6 83 62.7
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 8.7e-22 108.2 253 32.8
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.9e-21 107.1 254 31.5
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 2.5e-21 106.7 254 33.1
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 1.3e-20 104.4 251 31.5
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.6e-20 104.0 209 36.4
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 6.2e-20 102.1 241 30.3
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 8.2e-20 101.7 246 31.7
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 1.1e-19 101.3 224 32.1
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 4.0e-19 99.4 83 53.0
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 1.0e-17 94.7 199 32.2
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 2.9e-17 93.2 184 31.5
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 9.3e-16 88.2 199 29.1
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 4.6e-15 85.9 192 32.3
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 1.3e-14 84.3 200 30.5
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 8.7e-14 81.6 185 31.9
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.9e-13 80.5 200 28.0
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 2.7e-07 60.1 91 38.5
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 4.6e-07 59.3 56 50.0


User provided reference genes

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