Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 0.0e+00 1568.1 807 100.0
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 4.6e-200 702.2 1172 38.2
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 3.5e-184 649.4 1226 36.1
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 4.6e-184 649.0 1228 35.1
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 2.7e-176 623.2 1256 35.0
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 2.7e-176 623.2 1222 34.7
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 4.7e-168 595.9 703 46.5
FAN07G2778 Fragaria x ananassa HOM05D005651 ORTHO05D006877 7.9e-168 595.1 644 49.7
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 2.6e-166 590.1 644 49.4
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 7.4e-166 588.6 644 49.2
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 9.7e-166 588.2 644 49.2
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 2.4e-164 583.6 702 46.2
Cfa008665 Carpinus fangiana HOM05D005651 ORTHO05D006877 3.4e-163 579.7 650 47.7
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 1.3e-162 577.8 1174 34.0
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 4.2e-161 572.8 642 48.6
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 7.2e-161 572.0 1231 32.6
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 9.4e-161 571.6 645 48.5
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 9.4e-161 571.6 1182 34.7
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 6.7e-159 565.5 644 49.2
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 8.2e-157 558.5 645 47.4
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 2.0e-155 553.9 667 46.5
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 6.5e-154 548.9 653 46.4
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 4.7e-152 542.7 821 41.4
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 8.0e-152 542.0 645 47.3
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 1.8e-151 540.8 642 47.0
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 2.3e-151 540.4 651 47.9
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 3.0e-151 540.0 645 46.0
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 1.7e-149 534.3 642 47.0
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 8.2e-149 531.9 789 41.1
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 1.4e-148 531.2 649 46.5
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 2.4e-148 530.4 645 47.1
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 2.4e-148 530.4 647 47.9
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 3.1e-148 530.0 638 46.6
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 1.2e-147 528.1 647 45.0
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 1.2e-147 528.1 703 45.1
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 2.0e-147 527.3 644 47.2
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 2.9e-146 523.5 1034 35.5
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 1.9e-145 520.8 647 45.0
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 2.5e-145 520.4 634 47.3
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 3.2e-145 520.0 642 45.6
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 4.2e-145 519.6 643 44.6
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 4.2e-145 519.6 644 45.2
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 7.2e-145 518.8 644 45.7
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 6.1e-144 515.8 1235 30.8
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 6.1e-144 515.8 649 46.5
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 8.0e-144 515.4 645 45.1
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 1.0e-143 515.0 651 45.8
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 1.4e-143 514.6 642 45.6
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 1.8e-143 514.2 652 44.8
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 1.8e-143 514.2 766 40.2
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 3.0e-143 513.5 679 43.0
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 1.2e-142 511.5 649 45.0
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 1.2e-142 511.5 1235 30.4
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 2.0e-142 510.8 657 46.0
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 2.0e-142 510.8 654 45.1
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 3.4e-142 510.0 648 44.8
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 3.4e-142 510.0 657 46.1
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 5.7e-142 509.2 646 43.5
arahy.Tifrunner.gnm1.ann1.4U9R65 Arachis hypogaea HOM05D005651 ORTHO05D006877 7.5e-142 508.8 659 44.9
CsaV3_6G003070 Cucumis sativus L. HOM05D005651 ORTHO05D006877 2.2e-141 507.3 652 44.6
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 2.2e-141 507.3 644 44.6
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 2.8e-141 506.9 650 44.8
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 2.4e-140 503.8 647 43.7
Nitab4.5_0009569g0040 Nicotiana tabacum HOM05D005651 ORTHO05D006877 2.7e-139 500.4 650 44.3
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 1.3e-138 498.0 648 44.1
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 5.5e-137 492.7 543 50.5
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 3.6e-136 490.0 648 43.5
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 8.9e-135 485.3 646 42.9
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 4.4e-134 483.0 646 43.0
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 4.4e-134 483.0 690 41.7
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 1.7e-133 481.1 546 49.3
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 2.2e-133 480.7 646 42.7
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 2.2e-133 480.7 646 42.7
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 3.7e-133 479.9 646 42.7
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 3.7e-133 479.9 635 44.4
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 5.4e-132 476.1 543 47.5
unitig_748.g8008 Utricularia gibba HOM05D005651 ORTHO05D006877 2.3e-130 470.7 660 42.6
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 5.0e-130 469.5 673 41.8
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 5.6e-129 466.1 569 47.8
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 1.7e-125 454.5 528 47.5
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 2.2e-125 454.1 662 40.5
Psat2g094320 Pisum sativum HOM05D005651 ORTHO05D006877 1.2e-123 448.4 582 43.3
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 3.9e-122 443.4 742 38.7
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 5.0e-122 443.0 468 49.8
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 4.3e-121 439.9 556 44.8
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 2.1e-120 437.6 778 37.1
CARHR220210 Cardamine hirsuta HOM05D005651 ORTHO05D006877 2.3e-119 434.1 604 42.1
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 1.2e-118 431.8 544 45.0
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 6.4e-117 426.0 603 41.0
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 2.7e-107 394.0 728 34.3
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 1.1e-100 372.1 563 40.5
Dinv32169 Davidia involucrata HOM05D005651 ORTHO05D006877 2.5e-97 360.9 418 50.2
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 2.8e-96 357.5 491 40.9
Lj3A268T25 Lonicera japonica HOM05D005651 ORTHO05D006877 6.6e-90 336.3 419 48.0
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 1.3e-88 332.0 470 40.4
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 1.3e-82 312.0 1230 25.2
HPP92_024561 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.1e-71 275.8 428 40.0
Atru.chr3.1766 Acer truncatum HOM05D005651 ORTHO05D006877 1.5e-70 271.9 344 47.1
Phvul.006G051700 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.5e-70 271.9 429 39.4
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 2.9e-69 267.7 284 48.9
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 2.7e-67 261.2 332 43.7
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 1.1e-60 239.2 291 44.3
Mapoly0195s0003 Marchantia polymorpha HOM05D005651 ORTHO05D006877 9.7e-57 226.1 654 30.3
Lj3C268T6 Lonicera japonica HOM05D005651 ORTHO05D006877 4.7e-51 207.2 169 59.8
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 9.7e-49 199.5 168 57.7
Pp3c15_15330 Physcomitrium patens HOM05D005651 ORTHO05D006877 2.4e-47 194.9 622 27.2
HPP92_024560 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.5e-41 175.6 311 33.4
vmacro15591 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 2.5e-36 158.3 308 36.4
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 4.8e-32 144.1 185 44.9
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 1.9e-28 132.1 189 38.1
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 1.6e-27 129.0 211 37.4
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 1.6e-27 129.0 109 59.6
TWI56G0074 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 5.4e-23 114.0 110 52.7
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 1.1e-20 106.3 104 51.9
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 2.1e-19 102.1 187 33.2
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 3.0e-18 98.2 184 38.0
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 2.4e-15 88.6 71 57.7
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 5.4e-15 87.4 122 45.1
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 9.2e-15 86.7 117 45.3
Ah.04g149630 Amaranthus hybridus HOM05D005651 ORTHO05D006877 2.3e-13 82.0 76 47.4
SHI01039 Sapria himalayana HOM05D005651 ORTHO05D006877 2.3e-13 82.0 85 45.9
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 5.0e-13 80.9 81 49.4
unitig_748.g8007 Utricularia gibba HOM05D005651 ORTHO05D006877 1.5e-12 79.3 170 30.6
BraA03t12111Z Brassica rapa HOM05D005651 ORTHO05D006877 1.8e-10 72.4 90 42.2
Lalb_Chr24g0394541 Lupinus albus HOM05D005651 ORTHO05D006877 8.9e-10 70.1 80 47.5
TPR.G28787 Trifolium pratense HOM05D005651 ORTHO05D006877 4.9e-08 64.3 70 47.1
BcaB01g02718 Brassica carinata HOM05D005651 ORTHO05D006877 1.9e-07 62.4 106 41.5
Eucgr.F02519 Eucalyptus grandis HOM05D005651 ORTHO05D006877 3.2e-07 61.6 66 45.5


User provided reference genes

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