Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.9e-110 402.5 202 100.0
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.0e-87 324.7 202 82.7
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.9e-50 202.6 140 77.9
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 7.3e-46 188.0 152 66.4
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 3.6e-45 185.7 164 62.2
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.8e-44 183.3 147 66.0
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 4.0e-44 182.2 164 62.8
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 1.5e-43 180.3 160 62.5
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.6e-43 179.5 153 64.7
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.6e-43 179.5 153 64.7
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 4.4e-43 178.7 153 64.1
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 5.8e-43 178.3 159 62.9
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 9.9e-43 177.6 210 51.4
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 9.9e-43 177.6 147 62.6
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 9.9e-43 177.6 172 55.8
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.7e-42 176.8 190 55.3
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 2.9e-42 176.0 168 58.3
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 3.8e-42 175.6 150 63.3
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 4.9e-42 175.3 190 55.3
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 6.4e-42 174.9 150 64.0
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 8.4e-42 174.5 157 60.5
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.4e-41 173.7 153 62.1
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 1.9e-41 173.3 182 55.5
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 2.4e-41 172.9 163 57.1
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 3.2e-41 172.6 204 51.0
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 4.2e-41 172.2 152 61.2
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 4.2e-41 172.2 152 61.2
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 4.2e-41 172.2 135 68.1
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 5.4e-41 171.8 157 59.2
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 5.4e-41 171.8 149 59.7
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 5.4e-41 171.8 215 49.8
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.2e-40 170.6 162 59.9
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 1.2e-40 170.6 183 53.0
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.6e-40 170.2 193 51.8
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.6e-40 170.2 195 49.2
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 2.7e-40 169.5 149 63.1
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 3.5e-40 169.1 134 66.4
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 3.5e-40 169.1 157 59.2
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 4.6e-40 168.7 135 65.2
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 4.6e-40 168.7 150 61.3
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 1.0e-39 167.5 157 58.6
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 1.0e-39 167.5 157 58.0
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 1.0e-39 167.5 162 56.8
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 1.7e-39 166.8 216 48.6
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 2.3e-39 166.4 159 56.6
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 3.0e-39 166.0 150 58.7
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 3.0e-39 166.0 162 57.4
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 3.9e-39 165.6 157 57.3
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 6.6e-39 164.9 151 58.9
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 1.5e-38 163.7 159 54.1
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.9e-38 163.3 164 56.7
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 3.3e-38 162.5 152 55.9
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 7.3e-38 161.4 150 58.0
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 7.3e-38 161.4 135 60.7
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 1.6e-37 160.2 205 48.8
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.6e-37 160.2 150 55.3
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.6e-37 160.2 136 64.0
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 3.6e-37 159.1 176 54.0
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 3.6e-37 159.1 126 67.5
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 4.8e-37 158.7 206 49.0
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 4.8e-37 158.7 206 49.0
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 4.8e-37 158.7 199 49.2
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 4.8e-37 158.7 152 55.9
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 8.1e-37 157.9 182 50.5
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.4e-36 157.1 135 59.3
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 3.1e-36 156.0 150 57.3
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 3.1e-36 156.0 141 59.6
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 3.1e-36 156.0 199 47.7
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 5.3e-36 155.2 150 58.0
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 6.9e-36 154.8 184 51.1
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 9.0e-36 154.5 203 48.8
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 9.0e-36 154.5 203 48.8
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.2e-35 154.1 199 49.2
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 2.6e-35 152.9 140 58.6
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 2.6e-35 152.9 126 65.1
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 5.8e-35 151.8 141 58.2
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 5.8e-35 151.8 152 55.9
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 7.6e-35 151.4 150 57.3
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 7.6e-35 151.4 136 61.0
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 1.3e-34 150.6 136 60.3
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 2.9e-34 149.4 135 60.0
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 6.4e-34 148.3 160 51.9
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 1.9e-33 146.7 135 57.8
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 3.2e-33 146.0 194 49.0
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 3.2e-33 146.0 144 56.9
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 2.7e-32 142.9 162 50.0
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 2.7e-32 142.9 162 50.0
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 3.5e-32 142.5 150 55.3
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 7.8e-32 141.4 149 53.7
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 3.3e-30 136.0 159 49.1
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 2.8e-29 132.9 126 55.6
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 4.8e-29 132.1 135 54.8
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 2.2e-26 123.2 152 44.7
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.9e-25 120.2 81 69.1
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 7.1e-25 118.2 160 40.6
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 7.1e-25 118.2 81 67.9
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 2.1e-24 116.7 138 49.3
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.7e-24 116.3 80 73.8
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 2.8e-21 106.3 130 44.6
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.7e-18 97.1 80 60.0
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 5.5e-17 92.0 98 50.0
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 9.3e-17 91.3 111 45.0
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 4.2e-09 65.9 53 62.3
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 2.1e-08 63.5 52 61.5


User provided reference genes

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