Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 9.8e-135 483.4 235 100.0
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 1.3e-97 360.1 217 76.5
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 1.6e-97 359.8 221 73.8
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 2.8e-97 359.0 217 75.6
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 3.6e-97 358.6 217 74.7
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.1e-96 357.1 228 73.7
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 1.4e-96 356.7 231 71.0
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.8e-96 356.3 217 76.5
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 2.4e-96 355.9 219 72.1
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 2.4e-96 355.9 219 74.4
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 5.3e-96 354.8 219 74.0
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 6.9e-96 354.4 215 75.3
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 6.9e-96 354.4 215 75.3
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 6.9e-96 354.4 238 72.7
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 2.0e-95 352.8 235 76.2
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.0e-95 352.8 219 74.0
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 2.6e-95 352.4 215 74.9
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 4.4e-95 351.7 239 69.9
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 7.6e-95 350.9 218 73.4
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 7.6e-95 350.9 218 73.9
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 1.3e-94 350.1 231 70.6
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 1.7e-94 349.7 236 69.5
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 2.2e-94 349.4 217 73.3
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 2.9e-94 349.0 234 68.8
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 6.4e-94 347.8 217 72.4
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 6.4e-94 347.8 217 73.3
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.1e-93 347.1 217 71.4
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 1.9e-93 346.3 228 70.2
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 3.2e-93 345.5 236 69.9
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 5.4e-93 344.7 217 72.8
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 5.4e-93 344.7 236 69.9
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 5.4e-93 344.7 231 71.9
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 1.6e-92 343.2 227 70.5
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 1.6e-92 343.2 220 72.3
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.6e-92 343.2 229 68.6
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 1.6e-92 343.2 217 70.5
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 1.6e-92 343.2 229 68.6
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 2.1e-92 342.8 215 74.4
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 2.7e-92 342.4 215 72.6
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 3.5e-92 342.0 230 67.4
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 3.5e-92 342.0 228 70.2
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 6.0e-92 341.3 233 69.1
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 6.0e-92 341.3 232 67.2
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 6.0e-92 341.3 231 68.8
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 6.0e-92 341.3 234 67.1
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.3e-91 340.1 229 68.1
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.7e-91 339.7 216 70.8
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 3.0e-91 339.0 233 68.2
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 3.0e-91 339.0 234 67.9
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 3.0e-91 339.0 231 68.4
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 3.9e-91 338.6 225 67.6
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 3.9e-91 338.6 234 67.5
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 3.9e-91 338.6 226 67.7
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 5.1e-91 338.2 235 66.8
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 5.1e-91 338.2 233 68.2
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 5.1e-91 338.2 233 69.1
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 6.6e-91 337.8 226 67.3
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 6.6e-91 337.8 225 68.4
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 8.7e-91 337.4 233 69.1
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 1.5e-90 336.7 232 66.8
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 1.9e-90 336.3 232 66.8
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 2.5e-90 335.9 225 68.0
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 2.5e-90 335.9 226 68.6
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 3.3e-90 335.5 225 67.6
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 3.3e-90 335.5 225 67.6
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 3.3e-90 335.5 218 69.7
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 5.6e-90 334.7 234 68.4
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 9.6e-90 334.0 234 65.8
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 9.6e-90 334.0 226 67.7
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.6e-89 333.2 234 67.9
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 2.1e-89 332.8 232 66.4
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 2.8e-89 332.4 231 67.1
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 3.6e-89 332.0 234 65.8
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 4.8e-89 331.6 234 66.7
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 6.2e-89 331.3 217 68.7
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 6.2e-89 331.3 217 68.7
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 8.1e-89 330.9 205 73.2
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 1.8e-88 329.7 216 69.4
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 2.4e-88 329.3 220 71.4
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 2.4e-88 329.3 184 80.4
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 1.2e-87 327.0 217 70.5
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.2e-87 327.0 235 64.3
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 3.4e-87 325.5 220 70.0
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 4.5e-87 325.1 239 65.3
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 7.6e-87 324.3 233 66.1
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 2.2e-86 322.8 219 69.4
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.8e-86 322.0 245 65.3
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 6.4e-86 321.2 217 68.2
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 1.4e-85 320.1 219 68.0
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.9e-85 319.7 230 65.2
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 2.4e-85 319.3 234 64.1
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 3.2e-85 318.9 218 67.4
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 3.2e-85 318.9 195 73.3
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 7.1e-85 317.8 328 52.7
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 2.7e-84 315.8 217 68.2
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 3.5e-84 315.5 217 66.8
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.9e-82 309.7 281 56.9
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 1.3e-81 307.0 200 72.0
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 9.0e-80 300.8 217 64.5
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 2.0e-79 299.7 165 83.0
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 2.2e-78 296.2 205 64.9
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 1.1e-72 277.3 183 72.1
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 1.1e-72 277.3 164 76.2
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.5e-69 266.2 218 59.6
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 9.3e-69 264.2 221 57.5
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 6.9e-64 248.1 217 53.0
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 7.2e-53 211.5 141 70.2
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 6.3e-49 198.4 164 59.8
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 7.2e-45 184.9 234 44.9
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 6.7e-43 178.3 101 77.2
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.7e-41 173.7 128 64.1
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 2.2e-38 163.3 211 42.2
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 2.3e-35 153.3 96 69.8
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 5.2e-35 152.1 211 39.3
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.2e-33 146.7 84 79.8
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 1.4e-32 144.1 210 40.5
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 4.1e-32 142.5 82 78.0
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 4.1e-32 142.5 82 78.0
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.2e-31 141.0 105 66.7
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 5.9e-31 138.7 116 59.5
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 5.7e-26 122.1 103 58.3
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 9.8e-26 121.3 118 53.4
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 9.8e-26 121.3 118 53.4
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.7e-25 119.4 79 72.2
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.2e-20 104.4 82 61.0
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 8.0e-20 101.7 62 72.6
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.8e-19 100.5 66 71.2
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 2.7e-15 86.7 175 30.9
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 5.9e-15 85.5 190 32.6
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 5.0e-14 82.4 181 32.6
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 5.6e-13 79.0 48 75.0
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.1e-12 77.0 55 60.0
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 3.4e-10 69.7 55 63.6


User provided reference genes

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