Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2281 Ceratophyllum demersum HOM05D006656 ORTHO05D008208 9.0e-87 323.6 163 100.0
Gohir.A09G228200 Gossypium hirsutum HOM05D006656 ORTHO05D008208 4.1e-63 245.0 153 77.1
arahy.Tifrunner.gnm1.ann1.CLZM2Q Arachis hypogaea HOM05D006656 ORTHO05D008208 5.3e-63 244.6 159 74.8
Nn1g02903 Nelumbo nucifera HOM05D006656 ORTHO05D008208 6.9e-63 244.2 153 77.1
Gohir.D09G229300 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.5e-62 243.0 161 73.3
Gorai.006G252000 Gossypium raimondii HOM05D006656 ORTHO05D008208 1.5e-62 243.0 161 73.3
QL06p020043 Quercus lobata HOM05D006656 ORTHO05D008208 5.9e-62 241.1 158 74.1
Cpa.g.sc44.21 Carica papaya HOM05D006656 ORTHO05D008208 7.7e-62 240.7 152 76.3
Ciclev10006077m.g Citrus clementina HOM05D006656 ORTHO05D008208 2.9e-61 238.8 161 72.0
PSO210G7176 Papaver somniferum HOM05D006656 ORTHO05D008208 5.0e-61 238.0 151 76.2
Hund11920 Selenicereus undatus HOM05D006656 ORTHO05D008208 5.0e-61 238.0 156 74.4
Ah.13g072350 Amaranthus hybridus HOM05D006656 ORTHO05D008208 8.5e-61 237.3 157 74.5
PGR004G1080 Punica granatum HOM05D006656 ORTHO05D008208 1.1e-60 236.9 155 75.5
DCAR_030758 Daucus carota HOM05D000730 ORTHO05D008208 1.4e-60 236.5 162 69.8
Potri.010G068200 Populus trichocarpa HOM05D006656 ORTHO05D008208 1.9e-60 236.1 156 73.7
Eucgr.H02989 Eucalyptus grandis HOM05D006656 ORTHO05D008208 2.5e-60 235.7 152 75.0
PSO447G0273 Papaver somniferum HOM05D006656 ORTHO05D008208 3.2e-60 235.3 151 75.5
Thecc.04G260300 Theobroma cacao HOM05D006656 ORTHO05D008208 5.5e-60 234.6 160 71.9
Os10g0471300 Oryza sativa ssp. japonica HOM05D006656 ORTHO05D008208 7.2e-60 234.2 154 74.0
TWI09G0269 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 7.2e-60 234.2 153 74.5
TWI09G1522 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 7.2e-60 234.2 153 74.5
HPP92_001387 Vanilla planifolia HOM05D006656 ORTHO05D008208 7.2e-60 234.2 154 76.0
COL.COLO4_15934 Corchorus olitorius HOM05D006656 ORTHO05D008208 9.4e-60 233.8 154 72.1
Atru.chr4.1959 Acer truncatum HOM05D006656 ORTHO05D008208 1.2e-59 233.4 154 74.0
ClCG05G004140 Citrullus lanatus HOM05D006656 ORTHO05D008208 1.2e-59 233.4 159 71.1
MBI07_g22362_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 1.2e-59 233.4 163 72.4
MD13G1218700 Malus domestica HOM05D006656 ORTHO05D008208 1.2e-59 233.4 153 73.9
FvH4_4g04220 Fragaria vesca HOM05D006656 ORTHO05D008208 3.6e-59 231.9 157 72.6
MBI14_g30459_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 3.6e-59 231.9 163 71.2
Manes.13G093430 Manihot esculenta HOM05D006656 ORTHO05D008208 3.6e-59 231.9 154 72.7
Dinv29827 Davidia involucrata HOM05D006656 ORTHO05D008208 6.1e-59 231.1 149 73.8
Lalb_Chr03g0037311 Lupinus albus HOM05D006656 ORTHO05D008208 6.1e-59 231.1 151 74.8
Hma1.2p1_0112F.1_g054500 Hydrangea macrophylla HOM05D006656 ORTHO05D008208 7.9e-59 230.7 149 74.5
BcaB06g26499 Brassica carinata HOM05D006656 ORTHO05D008208 1.0e-58 230.3 152 75.0
Phvul.007G275000 Phaseolus vulgaris HOM05D006656 ORTHO05D008208 1.0e-58 230.3 150 73.3
CiPaw.01G180600 Carya illinoinensis HOM05D006656 ORTHO05D008208 1.4e-58 229.9 158 70.3
Sed0021014 Sechium edule HOM05D006656 ORTHO05D008208 1.4e-58 229.9 148 75.0
Sc25g0003620 Simmondsia chinensis HOM05D006656 ORTHO05D008208 1.4e-58 229.9 151 73.5
Ca_12138_v3 Cicer arietinum L. HOM05D006656 ORTHO05D008208 1.8e-58 229.6 153 71.9
Migut.G00494 Erythranthe guttata HOM05D006656 ORTHO05D008208 1.8e-58 229.6 154 73.4
Nitab4.5_0001425g0100 Nicotiana tabacum HOM05D006656 ORTHO05D008208 1.8e-58 229.6 150 74.0
RcHm_v2.0_Chr4g0394701 Rosa chinensis HOM05D006656 ORTHO05D008208 1.8e-58 229.6 157 71.3
EL10Ac3g04969 Beta vulgaris HOM05D006656 ORTHO05D008208 2.3e-58 229.2 159 69.8
CANSAT78G1635 Cannabis sativa HOM05D006656 ORTHO05D008208 2.3e-58 229.2 147 74.8
CsaV3_3G011860 Cucumis sativus L. HOM05D006656 ORTHO05D008208 2.3e-58 229.2 159 69.8
Medtr1g041795 Medicago truncatula HOM05D006656 ORTHO05D008208 2.3e-58 229.2 157 70.7
Aqoxy2G03715 Aquilegia oxysepala HOM05D006656 ORTHO05D008208 3.0e-58 228.8 156 70.5
THA.LOC104804764 Tarenaya hassleriana HOM05D006656 ORTHO05D008208 3.0e-58 228.8 152 73.0
arahy.Tifrunner.gnm1.ann1.DD5QG4 Arachis hypogaea HOM05D006656 ORTHO05D008208 3.9e-58 228.4 151 72.2
BraA07t28683Z Brassica rapa HOM05D006656 ORTHO05D008208 3.9e-58 228.4 152 74.3
Dinv27090 Davidia involucrata HOM05D006656 ORTHO05D008208 3.9e-58 228.4 149 73.8
A07p08920 Brassica napus HOM05D006656 ORTHO05D008208 5.1e-58 228.0 152 73.7
C07p13760 Brassica napus HOM05D006656 ORTHO05D008208 5.1e-58 228.0 152 74.3
Carub.0003s2372 Capsella rubella HOM05D006656 ORTHO05D008208 5.1e-58 228.0 152 73.7
SalBow3G1837 Salvia bowleyana HOM05D006656 ORTHO05D008208 5.1e-58 228.0 150 73.3
TPR.G25151 Trifolium pratense HOM05D006656 ORTHO05D008208 5.1e-58 228.0 157 69.4
FAN12G3008 Fragaria x ananassa HOM05D006656 ORTHO05D008208 6.7e-58 227.6 157 71.3
Actinidia39917 Actinidia chinensis HOM05D006656 ORTHO05D008208 8.8e-58 227.3 148 73.6
CAN.G220.47 Capsicum annuum HOM05D006656 ORTHO05D008208 8.8e-58 227.3 150 73.3
AT3G23490 Arabidopsis thaliana HOM05D006656 ORTHO05D008208 1.1e-57 226.9 152 73.0
BcaC06g35534 Brassica carinata HOM05D006656 ORTHO05D008208 1.1e-57 226.9 151 74.2
BolC7t41871H Brassica oleracea HOM05D006656 ORTHO05D008208 1.1e-57 226.9 151 74.2
Thhalv10021585m.g Eutrema salsugineum HOM05D006656 ORTHO05D008208 1.1e-57 226.9 152 73.0
Glyma.10G005200 Glycine max HOM05D006656 ORTHO05D008208 1.1e-57 226.9 153 70.6
Nitab4.5_0013448g0010 Nicotiana tabacum HOM05D006656 ORTHO05D008208 1.1e-57 226.9 159 69.2
AL3G38180 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 1.5e-57 226.5 152 73.0
MSTRG.4156 Avicennia marina HOM05D006656 ORTHO05D008208 1.5e-57 226.5 150 71.3
ECA248G3216 Erigeron canadensis HOM05D006656 ORTHO05D008208 2.0e-57 226.1 160 69.4
Sp3g21170 Schrenkiella parvula HOM05D006656 ORTHO05D008208 2.0e-57 226.1 152 73.7
SpUn0047_0050 Schrenkiella parvula HOM05D006656 ORTHO05D008208 2.0e-57 226.1 152 73.7
Prupe.1G045500 Prunus persica HOM05D006656 ORTHO05D008208 2.6e-57 225.7 157 70.1
Sabra10G0038900 Salix brachista HOM05D006656 ORTHO05D008208 2.6e-57 225.7 148 73.0
Peaxi162Scf00602g00515 Petunia axillaris HOM05D006656 ORTHO05D008208 3.3e-57 225.3 149 72.5
Solyc09g090430.3 Solanum lycopersicum HOM05D006656 ORTHO05D008208 3.3e-57 225.3 159 67.9
Sopen09g033350 Solanum pennellii HOM05D006656 ORTHO05D008208 3.3e-57 225.3 159 67.9
PGSC0003DMG400017160 Solanum tuberosum HOM05D006656 ORTHO05D008208 3.3e-57 225.3 159 68.6
AUR62002173 Chenopodium quinoa HOM05D006656 ORTHO05D008208 4.4e-57 224.9 145 75.9
Lj6g0027143 Lotus japonicus HOM05D006656 ORTHO05D008208 4.4e-57 224.9 150 71.3
CSS0031602 Camellia sinensis var. sinensis HOM05D006656 ORTHO05D008208 5.7e-57 224.6 149 71.8
arahy.Tifrunner.gnm1.ann1.C3VAXP Arachis hypogaea HOM05D006656 ORTHO05D008208 9.7e-57 223.8 153 69.9
HanXRQChr04g0115371 Helianthus annuus HOM05D006656 ORTHO05D008208 1.3e-56 223.4 160 68.1
ATR0736G110 Amborella trichopoda HOM05D006656 ORTHO05D008208 3.7e-56 221.9 160 66.9
AUR62015536 Chenopodium quinoa HOM05D006656 ORTHO05D008208 4.8e-56 221.5 179 64.8
HanXRQChr01g0022881 Helianthus annuus HOM05D006656 ORTHO05D008208 8.2e-56 220.7 159 68.6
Rhsim02G0042500 Rhododendron simsii HOM05D006656 ORTHO05D008208 8.2e-56 220.7 145 74.5
Zm00001eb046120 Zea mays HOM05D006656 ORTHO05D008208 8.2e-56 220.7 151 74.2
Lsat_1_v5_gn_1_75161 Lactuca sativa HOM05D006656 ORTHO05D008208 2.4e-55 219.2 160 68.1
VMungo0720G2665 Vigna mungo HOM05D006656 ORTHO05D008208 5.3e-55 218.0 141 74.5
Aa31LG8G9940 Aethionema arabicum HOM05D006656 ORTHO05D008208 7.0e-55 217.6 151 70.2
FAN17G2925 Fragaria x ananassa HOM05D006656 ORTHO05D008208 7.0e-55 217.6 149 70.5
Psat6g137160 Pisum sativum HOM05D006656 ORTHO05D008208 2.0e-54 216.1 154 67.5
vmacro15465 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 5.9e-54 214.5 142 73.2
MBI07_g15427_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 7.7e-54 214.2 163 68.1
SGA_v2.0_scaffold67G22735 Striga asiatica HOM05D006656 ORTHO05D008208 3.8e-53 211.8 186 61.3
Lj3A676G52 Lonicera japonica HOM05D006656 ORTHO05D008208 7.4e-49 197.6 176 57.4
Pp3c19_11440 Physcomitrium patens HOM05D006656 ORTHO05D008208 1.4e-47 193.4 146 59.6
vmacro15466 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 7.7e-46 187.6 166 59.0
Mapoly0080s0009 Marchantia polymorpha HOM05D006656 ORTHO05D008208 1.9e-44 183.0 139 61.2
Duzib151G0018 Durio zibethinus HOM05D006656 ORTHO05D008208 6.8e-42 174.5 137 64.2
Cfa014756 Carpinus fangiana HOM05D006656 ORTHO05D008208 1.8e-39 166.4 112 70.5
CBR_g36666 Chara braunii HOM05D006656 ORTHO05D008208 2.4e-39 166.0 148 54.7
HPP92_000029 Vanilla planifolia HOM05D006656 ORTHO05D008208 5.3e-39 164.9 162 58.6
AagrBONN_evm.TU.Sc2ySwM_344.2747 Anthoceros agrestis HOM05D006656 ORTHO05D008208 5.9e-38 161.4 145 52.4
MELO3C006399.2 Cucumis melo HOM05D000603 ORTHO05D003510 1.1e-36 157.1 151 53.0
AL242U10020 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 1.5e-36 156.8 107 71.0
GSVIVG01027874001 Vitis vinifera HOM05D006656 ORTHO05D008208 1.5e-36 156.8 91 80.2
Cc03_g05940 Coffea canephora HOM05D006656 ORTHO05D008208 7.2e-36 154.5 91 76.9
CBR_g71972 Chara braunii HOM05D006656 ORTHO05D008208 1.2e-35 153.7 145 53.8
PRCOL_00005673 Prasinoderma coloniale HOM05D006656 ORTHO05D008208 1.2e-33 147.1 148 47.3
Haze_11433 Corylus avellana HOM05D006656 ORTHO05D008208 4.8e-32 141.7 255 36.5
SMO271G0046 Selaginella moellendorffii HOM05D006656 ORTHO05D008208 3.5e-30 135.6 134 47.0
arahy.Tifrunner.gnm1.ann1.USJ12Z Arachis hypogaea HOM05D006656 ORTHO05D008208 7.5e-25 117.9 87 65.5
Nitab4.5_0000014g0170 Nicotiana tabacum HOM05D006656 ORTHO05D008208 4.4e-17 92.0 77 57.1
Gohir.A02G041301 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.7e-16 90.1 63 68.3
MCO04G243 Micromonas commoda HOM05D006656 ORTHO05D008208 1.9e-15 86.7 147 36.7
AagrBONN_evm.TU.Sc2ySwM_344.2745 Anthoceros agrestis HOM05D006656 ORTHO05D008208 1.2e-14 84.0 89 51.7
BcaB02g10054 Brassica carinata HOM05D006656 ORTHO05D008208 7.8e-14 81.3 64 62.5
BcaB06g27105 Brassica carinata HOM05D006656 ORTHO05D008208 1.9e-12 76.6 49 69.4
BolC2t11169H Brassica oleracea HOM05D006656 ORTHO05D008208 9.5e-12 74.3 55 63.6
BcaC09g51699 Brassica carinata HOM05D006656 ORTHO05D008208 2.8e-11 72.8 45 71.1
HPP92_027915 Vanilla planifolia HOM05D003501 ORTHO05D004388 1.7e-08 63.5 52 61.5
C05p47480 Brassica napus HOM05D006656 ORTHO05D008208 2.9e-08 62.8 37 75.7
C03p47720 Brassica napus HOM05D006656 ORTHO05D008208 8.3e-08 61.2 37 73.0


User provided reference genes

Program Settings