Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2206 Ceratophyllum demersum HOM05D000355 ORTHO05D000227 5.9e-110 401.0 216 100.0
CDE11G0997 Ceratophyllum demersum HOM05D000355 ORTHO05D000227 1.7e-69 266.5 173 80.9
MBI12_g30972_MAGBIO Magnolia biondii HOM05D000355 ORTHO05D000227 3.5e-14 82.8 192 35.4
Actinidia06128 Actinidia chinensis HOM05D000355 ORTHO05D000227 6.0e-14 82.0 184 34.8
TAR375G0501 Trochodendron aralioides HOM05D000355 ORTHO05D000227 2.3e-13 80.1 198 32.3
TAR629G2272 Trochodendron aralioides HOM05D000355 ORTHO05D000227 2.3e-13 80.1 191 34.0
Nn1g00374 Nelumbo nucifera HOM05D000355 ORTHO05D000227 3.0e-13 79.7 193 32.1
Actinidia18675 Actinidia chinensis HOM05D000355 ORTHO05D000227 1.1e-12 77.8 187 34.8
CSS0018579 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 5.7e-12 75.5 186 36.0
Lj3A901T81 Lonicera japonica HOM05D000355 ORTHO05D000227 1.3e-11 74.3 177 32.8
Dinv29236 Davidia involucrata HOM05D000355 ORTHO05D000227 1.8e-10 70.5 187 33.7
CSS0036298 Camellia sinensis var. sinensis HOM05D000355 ORTHO05D000227 2.4e-10 70.1 186 35.5
PGSC0003DMG400040473 Solanum tuberosum HOM05D000355 ORTHO05D000227 6.9e-10 68.6 187 31.0
ATR0620G020 Amborella trichopoda HOM05D000355 ORTHO05D000227 2.0e-09 67.0 184 32.1
Cc02_g01070 Coffea canephora HOM05D000355 ORTHO05D000227 2.0e-09 67.0 188 33.5
Rhsim09G0208300 Rhododendron simsii HOM05D000355 ORTHO05D000227 2.0e-09 67.0 185 33.5
Solyc03g082610.1 Solanum lycopersicum HOM05D000355 ORTHO05D000227 2.6e-09 66.6 186 30.1
Sopen03g022370 Solanum pennellii HOM05D000355 ORTHO05D000227 4.5e-09 65.9 186 29.6
Nitab4.5_0000319g0390 Nicotiana tabacum HOM05D000355 ORTHO05D000227 7.6e-09 65.1 186 29.6
Lsat_1_v5_gn_9_50340 Lactuca sativa HOM05D000355 ORTHO05D000227 3.8e-08 62.8 188 31.4
DCAR_010580 Daucus carota HOM05D000355 ORTHO05D000227 1.4e-07 60.8 162 31.5
vmacro10147 Vaccinium macrocarpon HOM05D004204 ORTHO05D005069 1.4e-07 60.8 182 31.3
CAN.G481.66 Capsicum annuum HOM05D000355 ORTHO05D000227 1.9e-07 60.5 195 30.8
CDE09G0300 Ceratophyllum demersum HOM05D000355 ORTHO05D000227 1.2e-06 57.8 170 29.4
Nitab4.5_0011765g0010 Nicotiana tabacum HOM05D000355 ORTHO05D000227 1.2e-06 57.8 182 30.2
HPP92_015088 Vanilla planifolia HOM05D000355 ORTHO05D000227 1.6e-06 57.4 178 28.7
MSTRG.27000 Avicennia marina HOM05D000355 ORTHO05D000227 3.6e-06 56.2 175 32.6


User provided reference genes

Program Settings