Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2184 Ceratophyllum demersum HOM05D003971 ORTHO05D004762 5.3e-131 471.1 246 100.0
TAR622G0096 Trochodendron aralioides HOM05D003971 ORTHO05D004762 1.6e-39 167.2 261 42.1
Nn4g22021 Nelumbo nucifera HOM05D003971 ORTHO05D004762 5.8e-37 158.7 249 41.8
PSO339G4968 Papaver somniferum HOM05D003971 ORTHO05D004762 1.4e-35 154.1 258 41.1
Ciclev10031176m.g Citrus clementina HOM05D003971 ORTHO05D004762 1.9e-35 153.7 229 40.6
PSO384G2792 Papaver somniferum HOM05D003971 ORTHO05D004762 1.2e-34 151.0 251 41.4
Dinv13723 Davidia involucrata HOM05D003971 ORTHO05D004762 6.0e-34 148.7 225 41.8
GSVIVG01008647001 Vitis vinifera HOM05D003971 ORTHO05D004762 2.3e-33 146.7 245 39.6
Aqoxy1G00170 Aquilegia oxysepala HOM05D003971 ORTHO05D004762 1.5e-32 144.1 254 39.4
Dinv23223 Davidia involucrata HOM05D003971 ORTHO05D004762 1.5e-32 144.1 254 39.4
QL10p000509 Quercus lobata HOM05D003971 ORTHO05D004762 1.5e-32 144.1 225 41.3
Phvul.009G161300 Phaseolus vulgaris HOM05D003971 ORTHO05D004762 2.5e-32 143.3 245 38.8
Cfa018707 Carpinus fangiana HOM05D003971 ORTHO05D004762 7.3e-32 141.7 219 42.5
MBI07_g41261_MAGBIO Magnolia biondii HOM05D003971 ORTHO05D004762 7.3e-32 141.7 261 39.8
arahy.Tifrunner.gnm1.ann1.9UH1TF Arachis hypogaea HOM05D003971 ORTHO05D004762 4.7e-31 139.0 226 41.2
Glyma.06G163900 Glycine max HOM05D003971 ORTHO05D004762 8.1e-31 138.3 245 38.4
Cpa.g.sc13.168 Carica papaya HOM05D003971 ORTHO05D004762 2.6e-29 133.3 223 41.3
CDE02G0369 Ceratophyllum demersum HOM05D003971 ORTHO05D004762 2.6e-29 133.3 249 37.8
Duzib084G0567 Durio zibethinus HOM05D003971 ORTHO05D004762 3.4e-29 132.9 245 37.6
Gohir.A03G056200 Gossypium hirsutum HOM05D003971 ORTHO05D004762 2.9e-28 129.8 240 39.2
HanXRQChr05g0155401 Helianthus annuus HOM05D003971 ORTHO05D004762 2.9e-28 129.8 219 39.3
Lalb_Chr11g0069181 Lupinus albus HOM05D003971 ORTHO05D004762 2.9e-28 129.8 219 37.9
SGA_v2.0_scaffold74G24722 Striga asiatica HOM05D003971 ORTHO05D004762 4.9e-28 129.0 231 39.8
Haze_07098 Corylus avellana HOM05D003971 ORTHO05D004762 8.4e-28 128.3 246 37.8
Gorai.003G116700 Gossypium raimondii HOM05D003971 ORTHO05D004762 1.1e-27 127.9 240 37.9
Sc04g0000200 Simmondsia chinensis HOM05D003971 ORTHO05D004762 1.1e-27 127.9 233 37.3
CANSAT56G1634 Cannabis sativa HOM05D003971 ORTHO05D004762 1.9e-27 127.1 250 33.2
Lsat_1_v5_gn_5_10121 Lactuca sativa HOM05D003971 ORTHO05D004762 1.9e-27 127.1 240 37.1
MD06G1130900 Malus domestica HOM05D003971 ORTHO05D004762 2.4e-27 126.7 260 33.5
Gohir.D03G110400 Gossypium hirsutum HOM05D003971 ORTHO05D004762 9.3e-27 124.8 227 38.8
Thecc.03G140300 Theobroma cacao HOM05D003971 ORTHO05D004762 2.1e-26 123.6 222 40.5
Rhsim08G0197300 Rhododendron simsii HOM05D003971 ORTHO05D004762 4.6e-26 122.5 234 37.2
arahy.Tifrunner.gnm1.ann1.86AC6C Arachis hypogaea HOM05D003971 ORTHO05D004762 6.0e-26 122.1 249 36.9
Gohir.D07G051000 Gossypium hirsutum HOM05D003971 ORTHO05D004762 6.0e-26 122.1 225 38.2
Gorai.001G054100 Gossypium raimondii HOM05D003971 ORTHO05D004762 6.0e-26 122.1 225 38.2
CSS0040569 Camellia sinensis var. sinensis HOM05D003971 ORTHO05D004762 7.8e-26 121.7 226 37.2
Gohir.A07G046700 Gossypium hirsutum HOM05D003971 ORTHO05D004762 1.0e-25 121.3 225 36.9
Lj1g0015188 Lotus japonicus HOM05D003971 ORTHO05D004762 1.0e-25 121.3 222 37.4
Psat5g055040 Pisum sativum HOM05D003971 ORTHO05D004762 1.0e-25 121.3 231 35.5
PGR083G2644 Punica granatum HOM05D003971 ORTHO05D004762 1.3e-25 120.9 237 40.1
MELO3C002386.2 Cucumis melo HOM05D003971 ORTHO05D004762 3.0e-25 119.8 236 38.1
Nitab4.5_0002584g0020 Nicotiana tabacum HOM05D003971 ORTHO05D004762 3.0e-25 119.8 282 35.1
CsaV3_1G009920 Cucumis sativus L. HOM05D003971 ORTHO05D004762 5.1e-25 119.0 227 37.9
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 1.5e-24 117.5 242 33.5
Lj9C486T6 Lonicera japonica HOM05D003971 ORTHO05D004762 2.5e-24 116.7 258 33.3
Medtr3g098600 Medicago truncatula HOM05D003971 ORTHO05D004762 3.3e-24 116.3 219 36.5
Sed0008211 Sechium edule HOM05D003971 ORTHO05D004762 3.3e-24 116.3 228 38.6
Atru.chr6.1916 Acer truncatum HOM05D003971 ORTHO05D004762 4.3e-24 115.9 223 35.0
RcHm_v2.0_Chr7g0188721 Rosa chinensis HOM05D003971 ORTHO05D004762 4.3e-24 115.9 226 34.5
MD14G1147500 Malus domestica HOM05D003971 ORTHO05D004762 9.6e-24 114.8 226 34.5
Nitab4.5_0008403g0010 Nicotiana tabacum HOM05D003971 ORTHO05D004762 2.1e-23 113.6 288 33.0
TPR.G25960 Trifolium pratense HOM05D003971 ORTHO05D004762 2.1e-23 113.6 234 34.2
Actinidia18301 Actinidia chinensis HOM05D003971 ORTHO05D004762 2.8e-23 113.2 262 35.5
FAN18G1571 Fragaria x ananassa HOM05D003971 ORTHO05D004762 2.8e-23 113.2 226 33.2
Prupe.5G142100 Prunus persica HOM05D003971 ORTHO05D004762 4.8e-23 112.5 220 37.7
FvH4_5g09480 Fragaria vesca HOM05D003971 ORTHO05D004762 6.2e-23 112.1 226 33.2
Migut.I00618 Erythranthe guttata HOM05D003971 ORTHO05D004762 8.1e-23 111.7 254 36.2
ClCG03G004040 Citrullus lanatus HOM05D003971 ORTHO05D004762 1.1e-22 111.3 232 36.6
Lsat_1_v5_gn_4_84501 Lactuca sativa HOM05D003971 ORTHO05D004762 1.1e-22 111.3 229 34.1
Solyc12g042200.2 Solanum lycopersicum HOM05D003971 ORTHO05D004762 1.4e-22 110.9 285 31.9
Potri.012G108100 Populus trichocarpa HOM05D003971 ORTHO05D004762 1.8e-22 110.5 254 33.1
Peaxi162Scf01168g00013 Petunia axillaris HOM05D003971 ORTHO05D004762 2.4e-22 110.2 287 32.1
FAN13G1049 Fragaria x ananassa HOM05D003971 ORTHO05D004762 9.0e-22 108.2 226 32.7
TWI23G0486 Tripterygium wilfordii HOM05D003971 ORTHO05D004762 2.0e-21 107.1 249 34.5
Sopen12g021240 Solanum pennellii HOM05D003971 ORTHO05D004762 2.6e-21 106.7 282 31.2
Sc22g0003380 Simmondsia chinensis HOM05D003971 ORTHO05D004762 4.5e-21 105.9 233 34.3
Manes.06G126801 Manihot esculenta HOM05D003971 ORTHO05D004762 1.7e-20 104.0 223 35.4
Sp6g13140 Schrenkiella parvula HOM05D003971 ORTHO05D004762 2.2e-20 103.6 240 32.5
CiPaw.11G001000 Carya illinoinensis HOM05D003971 ORTHO05D004762 6.4e-20 102.1 200 37.0
TWI39G0398 Tripterygium wilfordii HOM05D003971 ORTHO05D004762 1.1e-19 101.3 238 35.3
HPP92_011707 Vanilla planifolia HOM05D003971 ORTHO05D004762 1.9e-19 100.5 274 33.6
Hund10040 Selenicereus undatus HOM05D003971 ORTHO05D004762 2.4e-19 100.1 231 30.7
Nitab4.5_0000976g0020 Nicotiana tabacum HOM05D003971 ORTHO05D004762 4.2e-19 99.4 247 31.6
Potri.015G106300 Populus trichocarpa HOM05D003971 ORTHO05D004762 4.2e-19 99.4 252 31.0
FAN04G0277 Fragaria x ananassa HOM05D003971 ORTHO05D004762 5.4e-19 99.0 245 30.6
THA.LOC104825039 Tarenaya hassleriana HOM05D003971 ORTHO05D004762 9.3e-19 98.2 244 32.4
AL8G25160 Arabidopsis lyrata HOM05D003971 ORTHO05D004762 1.6e-18 97.4 241 31.5
Sabra12G0079300 Salix brachista HOM05D003971 ORTHO05D004762 1.6e-18 97.4 272 31.2
AT5G50970 Arabidopsis thaliana HOM05D003971 ORTHO05D004762 2.7e-18 96.7 244 31.6
MSTRG.22849 Avicennia marina HOM05D003971 ORTHO05D004762 2.7e-18 96.7 257 33.5
DCAR_021401 Daucus carota HOM05D003971 ORTHO05D004762 1.3e-17 94.4 252 31.0
vmacro19182 Vaccinium macrocarpon HOM05D003971 ORTHO05D004762 1.3e-17 94.4 235 32.8
Cc04_g05880 Coffea canephora HOM05D003971 ORTHO05D004762 2.3e-17 93.6 257 30.4
Thhalv10013209m.g Eutrema salsugineum HOM05D003971 ORTHO05D004762 2.3e-17 93.6 223 30.9
Oeu061253.1 Olea europaea HOM05D003971 ORTHO05D004762 3.9e-17 92.8 283 31.8
CARHR257220 Cardamine hirsuta HOM05D003971 ORTHO05D004762 5.1e-17 92.4 238 29.4
Carub.0008s1099 Capsella rubella HOM05D003971 ORTHO05D004762 6.7e-17 92.0 246 32.5
SalBow7G2108 Salvia bowleyana HOM05D003971 ORTHO05D004762 6.7e-17 92.0 269 33.5
Lj4g0027413 Lotus japonicus HOM05D003971 ORTHO05D004762 2.5e-16 90.1 246 30.5
ATR0582G269 Amborella trichopoda HOM05D003971 ORTHO05D004762 3.3e-16 89.7 200 35.5
Sabra15G0126400 Salix brachista HOM05D003971 ORTHO05D004762 3.3e-16 89.7 251 29.1
Eucgr.K00065 Eucalyptus grandis HOM05D003971 ORTHO05D004762 5.6e-16 89.0 224 33.9
Glyma.04G201300 Glycine max HOM05D003971 ORTHO05D004762 7.4e-16 88.6 244 31.1
Sopen03g037130 Solanum pennellii HOM05D003971 ORTHO05D004762 7.4e-16 88.6 259 28.6
Cc03_g15560 Coffea canephora HOM05D003971 ORTHO05D004762 1.6e-15 87.4 221 30.3
Hund02509 Selenicereus undatus HOM05D003971 ORTHO05D004762 2.1e-15 87.0 225 31.6
VMungo0251G1950 Vigna mungo HOM05D000512 ORTHO05D000861 4.8e-15 85.9 220 35.5
FAN08G0744 Fragaria x ananassa HOM05D003971 ORTHO05D004762 8.1e-15 85.1 221 29.0
Solyc03g118220.3 Solanum lycopersicum HOM05D003971 ORTHO05D004762 8.1e-15 85.1 259 28.2
PGSC0003DMG400014242 Solanum tuberosum HOM05D003971 ORTHO05D004762 8.1e-15 85.1 258 27.5
Phvul.002G281600 Phaseolus vulgaris HOM05D003971 ORTHO05D004762 1.8e-14 84.0 220 35.5
VMungo1309G0830 Vigna mungo HOM05D003971 ORTHO05D004762 3.1e-14 83.2 193 34.2
Lj5C87G6 Lonicera japonica HOM05D003971 ORTHO05D004762 5.3e-14 82.4 228 32.0
BolC3t14318H Brassica oleracea HOM05D003971 ORTHO05D004762 1.5e-13 80.9 219 28.8
BraA03t10933Z Brassica rapa HOM05D003971 ORTHO05D004762 1.5e-13 80.9 237 29.1
MBI03_g13042_MAGBIO Magnolia biondii HOM05D003971 ORTHO05D004762 1.5e-13 80.9 72 52.8
BcaC01g06062 Brassica carinata HOM05D003971 ORTHO05D004762 2.0e-13 80.5 219 28.8
C03p19320 Brassica napus HOM05D003971 ORTHO05D004762 2.0e-13 80.5 219 28.8
RcHm_v2.0_Chr1g0373351 Rosa chinensis HOM05D003971 ORTHO05D004762 2.6e-13 80.1 132 35.6
CsaV3_1G000070 Cucumis sativus L. HOM05D003971 ORTHO05D004762 9.9e-13 78.2 225 31.1
Oeu046606.1 Olea europaea HOM05D003971 ORTHO05D004762 6.4e-12 75.5 182 34.1
A03p16430 Brassica napus HOM05D003971 ORTHO05D004762 8.4e-12 75.1 219 27.9
ClCG06G018370 Citrullus lanatus HOM05D003971 ORTHO05D004762 4.2e-11 72.8 260 28.8
DCAR_016341 Daucus carota HOM05D003971 ORTHO05D004762 4.2e-11 72.8 222 29.3
Sed0022051 Sechium edule HOM05D003971 ORTHO05D004762 7.1e-11 72.0 217 28.6
unitig_21.g20335 Utricularia gibba HOM05D003971 ORTHO05D004762 7.1e-11 72.0 234 30.8
HPP92_028338 Vanilla planifolia HOM05D003971 ORTHO05D004762 7.1e-11 72.0 254 28.7
Ca_10878_v3 Cicer arietinum L. HOM05D003971 ORTHO05D004762 9.3e-11 71.6 151 31.8
SHI34430 Sapria himalayana HOM05D003971 ORTHO05D004762 2.1e-10 70.5 201 31.3
SEGI_28594 Sequoiadendron giganteum HOM05D003971 ORTHO05D004762 2.7e-10 70.1 228 27.2
Hma1.2p1_0664F.1_g199006 Hydrangea macrophylla HOM05D003971 ORTHO05D004762 1.0e-09 68.2 54 57.4
Zm00001eb210690 Zea mays HOM05D003971 ORTHO05D004762 2.3e-09 67.0 238 28.2
Os03g0851600 Oryza sativa ssp. japonica HOM05D003971 ORTHO05D004762 4.3e-08 62.8 222 28.8
Ah.11g046900 Amaranthus hybridus HOM05D003971 ORTHO05D004762 7.4e-08 62.0 162 29.6
Zm00001eb064630 Zea mays HOM05D003971 ORTHO05D004762 3.1e-06 56.6 221 27.6
Aa31LG3G7440 Aethionema arabicum HOM05D003971 ORTHO05D004762 5.3e-06 55.8 73 45.2


User provided reference genes

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