Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2139 Ceratophyllum demersum HOM05D006394 ORTHO05D008057 2.2e-84 315.5 146 100.0
CDE04G0153 Ceratophyllum demersum HOM05D006394 ORTHO05D008057 1.3e-73 279.6 142 93.0
Nn6g32361 Nelumbo nucifera HOM05D006394 ORTHO05D008057 6.7e-33 144.4 149 53.0
TAR133G0002 Trochodendron aralioides HOM05D006394 ORTHO05D008057 2.8e-31 139.0 138 55.8
Actinidia22984 Actinidia chinensis HOM05D006394 ORTHO05D008057 6.3e-31 137.9 135 52.6
TAR365G0979 Trochodendron aralioides HOM05D006394 ORTHO05D008057 6.3e-31 137.9 154 49.4
GSVIVG01018789001 Vitis vinifera HOM05D006394 ORTHO05D008057 1.1e-30 137.1 134 54.5
Lj4g0024758 Lotus japonicus HOM05D006394 ORTHO05D008057 3.1e-30 135.6 136 52.9
Lj2C467T3 Lonicera japonica HOM05D006394 ORTHO05D008057 1.2e-29 133.7 145 51.7
PSO541G5117 Papaver somniferum HOM05D006394 ORTHO05D008057 2.0e-29 132.9 132 48.5
Aqoxy2G01815 Aquilegia oxysepala HOM05D006394 ORTHO05D008057 2.6e-29 132.5 151 50.3
Manes.01G145300 Manihot esculenta HOM05D006394 ORTHO05D008057 7.7e-29 131.0 124 53.2
Actinidia28701 Actinidia chinensis HOM05D006394 ORTHO05D008057 2.2e-28 129.4 136 49.3
Actinidia31001 Actinidia chinensis HOM05D006394 ORTHO05D008057 2.9e-28 129.0 134 50.0
Duzib264G0144 Durio zibethinus HOM05D006394 ORTHO05D008057 6.5e-28 127.9 133 49.6
CsaV3_6G047020 Cucumis sativus L. HOM05D006394 ORTHO05D008057 1.1e-27 127.1 123 52.8
Prupe.7G167400 Prunus persica HOM05D006394 ORTHO05D008057 1.4e-27 126.7 136 52.9
MELO3C007895.2 Cucumis melo HOM05D006394 ORTHO05D008057 1.9e-27 126.3 123 52.8
Rhsim10G0213000 Rhododendron simsii HOM05D006394 ORTHO05D008057 1.9e-27 126.3 133 49.6
Cpa.g.sc6.241 Carica papaya HOM05D006394 ORTHO05D008057 7.2e-27 124.4 133 50.4
Hma1.2p1_0743F.1_g211600 Hydrangea macrophylla HOM05D006394 ORTHO05D008057 1.2e-26 123.6 132 51.5
CiPaw.07G057900 Carya illinoinensis HOM05D006394 ORTHO05D008057 1.6e-26 123.2 132 48.5
Gohir.A11G175800 Gossypium hirsutum HOM05D006394 ORTHO05D008057 1.6e-26 123.2 127 52.0
vmacro21917 Vaccinium macrocarpon HOM05D006394 ORTHO05D008057 1.6e-26 123.2 135 48.9
QL06p032614 Quercus lobata HOM05D006394 ORTHO05D008057 2.7e-26 122.5 134 50.0
Sed0000291 Sechium edule HOM05D006394 ORTHO05D008057 4.7e-26 121.7 123 51.2
VMungo0251G2040 Vigna mungo HOM05D006394 ORTHO05D008057 4.7e-26 121.7 136 47.8
CSS0039773 Camellia sinensis var. sinensis HOM05D006394 ORTHO05D008057 6.1e-26 121.3 142 47.9
Glyma.16G129000 Glycine max HOM05D006394 ORTHO05D008057 1.4e-25 120.2 136 46.3
Gohir.D11G183600 Gossypium hirsutum HOM05D006394 ORTHO05D008057 1.4e-25 120.2 123 52.0
Gorai.007G195500 Gossypium raimondii HOM05D006394 ORTHO05D008057 1.4e-25 120.2 123 52.0
MD15G1246300 Malus domestica HOM05D006394 ORTHO05D008057 1.4e-25 120.2 133 50.4
TPR.G30047 Trifolium pratense HOM05D006394 ORTHO05D008057 1.8e-25 119.8 137 50.4
Eucgr.J02427 Eucalyptus grandis HOM05D006394 ORTHO05D008057 2.3e-25 119.4 132 50.0
Potri.005G115100 Populus trichocarpa HOM05D006394 ORTHO05D008057 3.0e-25 119.0 130 48.5
Glyma.02G048900 Glycine max HOM05D006394 ORTHO05D008057 3.9e-25 118.6 136 47.1
PSO675G2528 Papaver somniferum HOM05D006394 ORTHO05D008057 5.1e-25 118.2 145 44.1
TWI53G2075 Tripterygium wilfordii HOM05D006394 ORTHO05D008057 6.7e-25 117.9 136 46.3
DCAR_032392 Daucus carota HOM05D006394 ORTHO05D008057 8.8e-25 117.5 129 48.1
Lalb_Chr09g0333101 Lupinus albus HOM05D006394 ORTHO05D008057 8.8e-25 117.5 137 48.9
RcHm_v2.0_Chr2g0099531 Rosa chinensis HOM05D006394 ORTHO05D008057 8.8e-25 117.5 130 49.2
Sopen03g006350 Solanum pennellii HOM05D006394 ORTHO05D008057 8.8e-25 117.5 140 45.0
Thecc.01G019800 Theobroma cacao HOM05D006394 ORTHO05D008057 8.8e-25 117.5 136 47.8
MSTRG.2708 Avicennia marina HOM05D006394 ORTHO05D008057 2.0e-24 116.3 130 48.5
Solyc03g033560.3 Solanum lycopersicum HOM05D006394 ORTHO05D008057 2.0e-24 116.3 140 44.3
SalBow3G1310 Salvia bowleyana HOM05D006394 ORTHO05D008057 2.6e-24 115.9 157 41.4
PGSC0003DMG400022563 Solanum tuberosum HOM05D006394 ORTHO05D008057 2.6e-24 115.9 141 45.4
Migut.H01156 Erythranthe guttata HOM05D006394 ORTHO05D008057 3.3e-24 115.5 123 48.0
HanXRQChr14g0441351 Helianthus annuus HOM05D006394 ORTHO05D008057 4.4e-24 115.2 132 47.0
Phvul.003G262300 Phaseolus vulgaris HOM05D006394 ORTHO05D008057 4.4e-24 115.2 136 45.6
Ca_22372_v3 Cicer arietinum L. HOM05D006394 ORTHO05D008057 7.4e-24 114.4 134 48.5
Medtr8g075970 Medicago truncatula HOM05D006394 ORTHO05D008057 7.4e-24 114.4 150 45.3
Psat4g099000 Pisum sativum HOM05D006394 ORTHO05D008057 7.4e-24 114.4 135 47.4
CANSAT01G2157 Cannabis sativa HOM05D006394 ORTHO05D008057 1.3e-23 113.6 136 49.3
ClCG01G020230 Citrullus lanatus HOM05D006394 ORTHO05D008057 1.3e-23 113.6 117 53.0
Gohir.A10G098200 Gossypium hirsutum HOM05D006394 ORTHO05D008057 1.3e-23 113.6 122 46.7
Cc07_g10630 Coffea canephora HOM05D006394 ORTHO05D008057 1.7e-23 113.2 139 45.3
Gohir.D10G090000 Gossypium hirsutum HOM05D006394 ORTHO05D008057 2.2e-23 112.8 122 46.7
Gorai.011G098800 Gossypium raimondii HOM05D006394 ORTHO05D008057 2.2e-23 112.8 122 46.7
COL.COLO4_21919 Corchorus olitorius HOM05D006394 ORTHO05D008057 4.8e-23 111.7 127 47.2
Zm00001eb418470 Zea mays HOM05D006394 ORTHO05D008057 1.1e-22 110.5 133 45.1
arahy.Tifrunner.gnm1.ann1.SHNU8N Arachis hypogaea HOM05D006394 ORTHO05D008057 1.8e-22 109.8 129 46.5
AL3G51010 Arabidopsis lyrata HOM05D006394 ORTHO05D008057 2.4e-22 109.4 123 46.3
arahy.Tifrunner.gnm1.ann1.VDMC0V Arachis hypogaea HOM05D006394 ORTHO05D008057 2.4e-22 109.4 129 46.5
FvH4_1g11930 Fragaria vesca HOM05D006394 ORTHO05D008057 2.4e-22 109.4 132 48.5
FAN23G1778 Fragaria x ananassa HOM05D006394 ORTHO05D008057 2.4e-22 109.4 132 48.5
FAN26G2471 Fragaria x ananassa HOM05D006394 ORTHO05D008057 3.1e-22 109.0 132 48.5
Hund16487 Selenicereus undatus HOM05D006394 ORTHO05D008057 3.1e-22 109.0 134 45.5
Zm00001eb411540 Zea mays HOM05D006394 ORTHO05D008057 4.1e-22 108.6 134 45.5
CAN.G1735.1 Capsicum annuum HOM05D006394 ORTHO05D008057 5.3e-22 108.2 129 46.5
FAN19G0259 Fragaria x ananassa HOM05D006394 ORTHO05D008057 5.3e-22 108.2 132 47.7
FAN28G2242 Fragaria x ananassa HOM05D006394 ORTHO05D008057 7.0e-22 107.8 132 48.5
Peaxi162Scf00034g02720 Petunia axillaris HOM05D006394 ORTHO05D008057 9.1e-22 107.5 128 47.7
Carub.0003s3211 Capsella rubella HOM05D006394 ORTHO05D008057 1.2e-21 107.1 122 44.3
Sc16g0002110 Simmondsia chinensis HOM05D006394 ORTHO05D008057 1.2e-21 107.1 110 51.8
A07p02700 Brassica napus HOM05D006394 ORTHO05D008057 1.5e-21 106.7 120 46.7
Ciclev10025906m.g Citrus clementina HOM05D006394 ORTHO05D008057 1.5e-21 106.7 113 50.4
AT2G17975 Arabidopsis thaliana HOM05D006394 ORTHO05D008057 2.0e-21 106.3 122 45.1
C07p05000 Brassica napus HOM05D006394 ORTHO05D008057 2.0e-21 106.3 120 45.0
Os04g0110600 Oryza sativa ssp. japonica HOM05D006394 ORTHO05D008057 2.0e-21 106.3 138 44.9
Aa31LG8G15150 Aethionema arabicum HOM05D006394 ORTHO05D008057 3.4e-21 105.5 124 46.0
BcaB03g16582 Brassica carinata HOM05D006394 ORTHO05D008057 3.4e-21 105.5 120 46.7
THA.LOC104804261 Tarenaya hassleriana HOM05D006394 ORTHO05D008057 3.4e-21 105.5 124 44.4
HPP92_007113 Vanilla planifolia HOM05D006394 ORTHO05D008057 3.4e-21 105.5 142 43.7
unitig_22.g6143 Utricularia gibba HOM05D006394 ORTHO05D008057 4.5e-21 105.1 147 42.9
MD02G1133300 Malus domestica HOM05D006394 ORTHO05D008057 5.9e-21 104.8 121 50.4
Sp3g31400 Schrenkiella parvula HOM05D006394 ORTHO05D008057 1.0e-20 104.0 123 46.3
Thhalv10022807m.g Eutrema salsugineum HOM05D006394 ORTHO05D008057 1.3e-20 103.6 121 46.3
BcaC06g36350 Brassica carinata HOM05D006394 ORTHO05D008057 1.7e-20 103.2 120 44.2
Sabra05G0094200 Salix brachista HOM05D006394 ORTHO05D008057 2.9e-20 102.4 116 46.6
BraA07t28070Z Brassica rapa HOM05D006394 ORTHO05D008057 3.8e-20 102.1 121 46.3
BolC7t40901H Brassica oleracea HOM05D006394 ORTHO05D008057 5.0e-20 101.7 121 44.6
PGR102G2413 Punica granatum HOM05D006394 ORTHO05D008057 1.4e-19 100.1 132 47.7
Zm00001eb089410 Zea mays HOM05D006394 ORTHO05D008057 7.2e-19 97.8 123 46.3
CARHR108450 Cardamine hirsuta HOM05D006394 ORTHO05D008057 2.3e-17 92.8 119 44.5
ECA238G0838 Erigeron canadensis HOM05D006394 ORTHO05D008057 3.9e-17 92.0 129 41.1
unitig_8.g2966 Utricularia gibba HOM05D006394 ORTHO05D008057 1.3e-15 87.0 108 47.2
Sopen10g011120 Solanum pennellii HOM05D006394 ORTHO05D008057 9.1e-14 80.9 64 54.7
SMO347G0374 Selaginella moellendorffii HOM05D006394 ORTHO05D008057 3.8e-12 75.5 111 40.5
MBI05_g15342_MAGBIO Magnolia biondii HOM05D006394 ORTHO05D008057 8.5e-12 74.3 90 50.0
CBR_g22407 Chara braunii HOM05D006394 ORTHO05D008057 6.1e-10 68.2 123 38.2
Haze_03772 Corylus avellana HOM05D006394 ORTHO05D008057 2.8e-07 59.3 94 41.5
ATR0853G001 Amborella trichopoda HOM05D006394 ORTHO05D008057 4.8e-07 58.5 93 47.3
Lsat_1_v5_gn_4_146641 Lactuca sativa HOM05D006394 ORTHO05D008057 1.1e-06 57.4 97 38.1
Carub.0003s1543 Capsella rubella HOM05D001564 ORTHO05D001439 9.1e-06 54.3 106 34.9


User provided reference genes

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