Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 1.1e-270 936.0 470 100.0
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 1.8e-217 759.2 473 78.2
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 1.6e-216 756.1 470 78.1
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.1e-214 750.0 478 76.2
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 4.4e-211 738.0 468 74.6
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 1.3e-210 736.5 470 75.5
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 1.4e-209 733.0 465 76.3
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 1.6e-208 729.6 469 74.8
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 2.1e-208 729.2 494 72.7
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 6.0e-208 727.6 466 74.0
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 6.0e-208 727.6 470 74.5
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 2.3e-207 725.7 467 74.3
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 5.0e-207 724.5 465 72.9
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 6.6e-207 724.2 465 74.4
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 1.5e-206 723.0 465 73.3
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 3.3e-206 721.8 466 72.5
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 4.3e-206 721.5 466 73.8
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 5.6e-206 721.1 474 73.6
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 5.6e-206 721.1 461 75.5
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 1.2e-205 719.9 469 72.3
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 6.2e-205 717.6 502 70.7
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 1.4e-204 716.5 467 73.4
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 3.1e-204 715.3 465 74.4
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 4.0e-204 714.9 504 69.2
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 8.9e-204 713.8 465 73.1
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 8.9e-204 713.8 472 73.3
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 4.4e-203 711.4 465 72.7
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 4.4e-203 711.4 469 72.9
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 2.2e-202 709.1 470 70.9
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 2.9e-202 708.8 471 73.0
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 3.7e-202 708.4 465 72.5
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 1.1e-201 706.8 465 72.5
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 5.4e-201 704.5 465 71.6
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 5.4e-201 704.5 499 68.1
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 1.6e-200 703.0 468 71.4
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.6e-200 701.4 499 67.7
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 4.6e-200 701.4 470 69.6
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 1.7e-199 699.5 470 70.0
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 2.3e-199 699.1 461 71.8
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.1e-198 696.8 469 70.1
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 7.3e-198 694.1 470 70.9
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 7.3e-198 694.1 469 68.9
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 9.5e-198 693.7 510 66.9
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 9.5e-198 693.7 463 71.1
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 1.2e-197 693.3 462 70.8
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.7e-197 691.4 502 66.7
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 1.4e-196 689.9 469 69.5
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.5e-195 686.4 469 69.7
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 8.4e-194 680.6 465 68.8
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.1e-193 680.2 469 68.7
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 4.6e-192 674.9 556 62.6
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 3.3e-190 668.7 467 68.3
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 9.3e-185 650.6 540 59.6
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 2.3e-183 646.0 466 66.1
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 8.7e-183 644.0 500 62.4
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 2.4e-180 636.0 462 64.3
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 5.3e-180 634.8 463 62.6
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 9.0e-180 634.0 462 65.4
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 5.8e-179 631.3 393 77.1
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.7e-176 622.5 468 66.0
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 1.3e-175 620.2 467 64.5
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 4.3e-174 615.1 402 71.9
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 9.0e-172 607.4 402 70.6
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 9.0e-172 607.4 402 70.6
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 9.0e-172 607.4 466 62.7
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 3.4e-171 605.5 383 75.2
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 5.8e-171 604.7 465 62.8
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.8e-170 602.1 426 69.2
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.1e-169 600.5 400 70.5
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 7.1e-169 597.8 464 63.4
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 5.6e-166 588.2 419 67.3
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.7e-162 576.6 492 60.6
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 1.2e-160 570.5 473 61.5
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 2.1e-160 569.7 464 59.9
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.0e-154 550.8 365 72.1
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 8.5e-154 547.7 468 58.8
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 4.5e-147 525.4 327 76.5
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 4.2e-145 518.8 368 68.5
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 1.2e-139 500.7 333 70.3
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.0e-134 483.4 368 67.7
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 2.8e-112 409.8 268 70.9
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 3.1e-95 353.2 235 72.3
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 3.2e-68 263.5 450 32.2
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 8.7e-66 255.4 166 74.1
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.6e-59 234.6 152 73.7
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 4.2e-52 209.9 235 51.1
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 1.5e-46 191.4 159 63.5
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 7.4e-41 172.6 119 67.2
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 6.3e-24 116.3 400 24.5
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 1.1e-23 115.5 403 25.1
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.2e-22 112.1 77 64.9
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 1.1e-20 105.5 403 25.1
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 2.8e-16 90.9 340 25.6
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 1.7e-13 81.6 480 22.3
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 5.0e-13 80.1 57 63.2
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 3.0e-10 70.9 376 23.1
Pp3c24_8280 Physcomitrium patens HOM05D007497 ORTHO05D022249 1.3e-08 65.5 381 23.1
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 8.3e-08 62.8 58 53.4


User provided reference genes

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