Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 1.5e-122 443.0 240 100.0
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 4.1e-72 275.4 190 71.6
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 3.5e-71 272.3 206 64.1
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 1.7e-70 270.0 185 70.3
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 6.6e-70 268.1 199 65.8
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 8.6e-70 267.7 178 71.9
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 8.6e-70 267.7 185 70.8
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 1.9e-69 266.5 192 68.2
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 7.3e-69 264.6 197 67.5
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 1.2e-68 263.8 185 70.3
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 1.6e-68 263.5 191 67.5
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 1.6e-68 263.5 187 70.1
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 2.8e-68 262.7 189 70.9
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 2.8e-68 262.7 192 69.3
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 8.1e-68 261.2 190 67.9
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 8.1e-68 261.2 203 64.0
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 1.1e-67 260.8 198 66.7
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 1.1e-67 260.8 185 70.3
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 1.4e-67 260.4 203 64.0
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 1.8e-67 260.0 188 70.2
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 2.3e-67 259.6 199 65.3
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 2.3e-67 259.6 201 65.2
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 4.0e-67 258.8 186 68.8
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 6.8e-67 258.1 183 69.4
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 2.6e-66 256.1 204 62.7
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 2.6e-66 256.1 195 67.7
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 5.8e-66 255.0 193 65.3
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 7.6e-66 254.6 198 66.2
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 9.9e-66 254.2 184 66.3
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 1.7e-65 253.4 185 68.6
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 1.7e-65 253.4 187 67.4
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 3.8e-65 252.3 198 64.6
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 6.4e-65 251.5 192 66.1
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 8.4e-65 251.1 200 64.5
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 8.4e-65 251.1 188 65.4
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.4e-64 250.4 202 62.9
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 1.4e-64 250.4 184 65.8
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 3.2e-64 249.2 191 63.4
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.2e-64 249.2 199 64.3
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 4.1e-64 248.8 198 64.6
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 5.4e-64 248.4 178 68.5
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 7.1e-64 248.1 160 73.8
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 9.2e-64 247.7 199 63.8
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 9.2e-64 247.7 168 72.0
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 1.2e-63 247.3 189 66.1
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.2e-63 247.3 199 63.8
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 2.7e-63 246.1 201 62.2
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 6.0e-63 245.0 192 65.1
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 7.8e-63 244.6 173 68.8
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 7.8e-63 244.6 198 63.1
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 1.3e-62 243.8 156 75.6
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 1.7e-62 243.4 179 68.2
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 1.7e-62 243.4 160 73.8
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 2.3e-62 243.0 189 64.6
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 3.0e-62 242.7 187 64.2
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 3.9e-62 242.3 160 72.5
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 3.9e-62 242.3 188 63.3
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 6.6e-62 241.5 188 64.9
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 6.6e-62 241.5 184 62.5
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 1.1e-61 240.7 187 63.6
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 1.1e-61 240.7 188 62.8
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 2.5e-61 239.6 179 66.5
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 4.3e-61 238.8 194 64.9
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 4.3e-61 238.8 179 67.0
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 4.3e-61 238.8 190 63.2
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 4.3e-61 238.8 195 61.5
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 7.3e-61 238.0 187 63.6
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 9.6e-61 237.7 203 60.6
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 9.6e-61 237.7 154 72.1
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 9.6e-61 237.7 197 56.9
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 1.6e-60 236.9 156 74.4
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 2.8e-60 236.1 210 55.7
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 2.8e-60 236.1 172 66.3
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 3.6e-60 235.7 191 61.3
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 3.6e-60 235.7 156 73.7
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 4.7e-60 235.3 202 57.9
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 4.7e-60 235.3 196 56.6
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 6.2e-60 235.0 190 61.1
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.1e-59 234.2 185 63.2
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 1.1e-59 234.2 196 60.2
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 1.4e-59 233.8 199 62.3
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 1.8e-59 233.4 187 60.4
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 2.4e-59 233.0 190 60.5
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 2.4e-59 233.0 190 60.5
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 4.0e-59 232.3 162 69.1
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 5.2e-59 231.9 194 62.4
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 1.2e-58 230.7 171 66.1
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 2.0e-58 229.9 202 57.4
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 2.0e-58 229.9 202 57.4
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 2.0e-58 229.9 190 60.0
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 4.4e-58 228.8 199 60.3
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 7.6e-58 228.0 199 60.3
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 9.9e-58 227.6 199 60.8
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 9.9e-58 227.6 199 60.8
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 3.8e-57 225.7 171 63.7
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 4.9e-57 225.3 171 66.1
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 8.4e-57 224.6 193 54.9
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 1.6e-55 220.3 202 57.4
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 6.0e-55 218.4 190 57.4
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 1.3e-54 217.2 179 62.0
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 1.7e-54 216.9 177 59.9
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 1.7e-54 216.9 190 57.4
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 3.0e-54 216.1 173 62.4
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 5.1e-54 215.3 144 70.8
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 6.6e-54 214.9 211 53.1
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 1.9e-53 213.4 179 60.9
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 1.6e-52 210.3 156 67.9
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 2.9e-49 199.5 172 59.9
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 3.2e-48 196.1 155 58.1
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 9.6e-45 184.5 196 54.1
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 1.6e-44 183.7 142 59.9
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 4.0e-43 179.1 149 60.4
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 1.5e-42 177.2 154 55.2
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 4.5e-42 175.6 125 70.4
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 1.4e-40 170.6 138 60.9
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 1.9e-40 170.2 130 66.9
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 5.5e-40 168.7 153 57.5
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 8.7e-38 161.4 145 60.7
QL10p015509 Quercus lobata HOM05D005796 ORTHO05D007054 1.3e-36 157.5 95 75.8
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 1.6e-36 157.1 149 58.4
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 1.6e-36 157.1 149 58.4
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 4.8e-36 155.6 129 62.8
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 3.1e-35 152.9 137 57.7
CAN.G4519.1 Capsicum annuum HOM05D005796 ORTHO05D007054 2.3e-30 136.7 89 71.9
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 8.7e-30 134.8 147 53.1
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 8.2e-20 101.7 87 63.2
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 6.9e-19 98.6 84 60.7
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 1.4e-16 90.9 114 46.5
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 1.5e-13 80.9 152 29.6
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 4.4e-13 79.3 120 41.7
Glyma.05G030200 Glycine max HOM05D005796 ORTHO05D007054 7.4e-13 78.6 50 72.0
C09p08830 Brassica napus HOM05D005796 ORTHO05D007054 2.9e-09 66.6 37 73.0
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 6.1e-07 58.9 128 24.2
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 8.8e-06 55.1 54 48.1


User provided reference genes

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