Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2049 Ceratophyllum demersum HOM05D002969 ORTHO05D003308 0.0e+00 1833.2 928 100.0
TAR626G1632 Trochodendron aralioides HOM05D002969 ORTHO05D003308 7.9e-188 661.8 973 41.3
Actinidia32183 Actinidia chinensis HOM05D002969 ORTHO05D003308 1.6e-167 594.3 963 40.2
Aqoxy7G01394 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 4.5e-167 592.8 955 40.4
CSS0043728 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 6.3e-161 572.4 949 40.1
Rhsim08G0238100 Rhododendron simsii HOM05D002969 ORTHO05D003308 2.3e-158 563.9 982 39.0
Nn7g36584 Nelumbo nucifera HOM05D002969 ORTHO05D003308 3.8e-158 563.1 949 38.4
Ciclev10024687m.g Citrus clementina HOM05D002969 ORTHO05D003308 8.6e-158 562.0 957 37.8
Prupe.3G042500 Prunus persica HOM05D002969 ORTHO05D003308 1.6e-156 557.8 974 38.2
QL05p007828 Quercus lobata HOM05D002969 ORTHO05D003308 2.1e-156 557.4 955 39.0
GSVIVG01016771001 Vitis vinifera HOM05D002969 ORTHO05D003308 3.6e-156 556.6 940 38.3
Lj7C292T8 Lonicera japonica HOM05D002969 ORTHO05D003308 8.0e-156 555.4 966 39.5
Thecc.06G119100 Theobroma cacao HOM05D002969 ORTHO05D003308 1.4e-155 554.7 953 37.8
COL.COLO4_30764 Corchorus olitorius HOM05D002969 ORTHO05D003308 2.3e-155 553.9 956 38.8
MD09G1184300 Malus domestica HOM05D002969 ORTHO05D003308 7.5e-154 548.9 959 37.5
Lalb_Chr10g0094641 Lupinus albus HOM05D002969 ORTHO05D003308 9.8e-154 548.5 957 37.8
Ca_13957_v3 Cicer arietinum L. HOM05D002969 ORTHO05D003308 1.4e-152 544.7 939 36.8
Haze_16025 Corylus avellana HOM05D002969 ORTHO05D003308 1.4e-152 544.7 1010 37.0
Gorai.012G011500 Gossypium raimondii HOM05D002969 ORTHO05D003308 4.5e-151 539.7 973 36.8
Gohir.D04G009700 Gossypium hirsutum HOM05D002969 ORTHO05D003308 5.9e-151 539.3 956 36.6
RcHm_v2.0_Chr2g0145161 Rosa chinensis HOM05D002969 ORTHO05D003308 5.9e-151 539.3 968 37.9
Potri.003G064000 Populus trichocarpa HOM05D002969 ORTHO05D003308 1.0e-150 538.5 949 38.6
TPR.G14707 Trifolium pratense HOM05D002969 ORTHO05D003308 1.7e-150 537.7 939 36.2
FAN14G5519 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.1e-149 535.0 965 37.0
FvH4_6g34630 Fragaria vesca HOM05D002969 ORTHO05D003308 3.3e-149 533.5 962 36.7
Lj3g0017600 Lotus japonicus HOM05D002969 ORTHO05D003308 5.6e-149 532.7 946 36.0
Duzib235G1299 Durio zibethinus HOM05D002969 ORTHO05D003308 7.3e-149 532.3 951 37.6
Gohir.A05G405950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 9.5e-149 531.9 948 37.0
FAN09G2022 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.2e-148 531.6 962 36.6
Psat1g003120 Pisum sativum HOM05D002969 ORTHO05D003308 1.6e-148 531.2 953 36.9
PSO447G0254 Papaver somniferum HOM05D002969 ORTHO05D003308 1.0e-147 528.5 975 37.9
FAN05G1938 Fragaria x ananassa HOM05D002969 ORTHO05D003308 3.1e-147 526.9 960 36.5
CsaV3_3G015990 Cucumis sativus L. HOM05D002969 ORTHO05D003308 2.6e-146 523.9 949 37.7
Sabra03G0037600 Salix brachista HOM05D002969 ORTHO05D003308 9.8e-146 521.9 957 38.1
TWI31G0668 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 1.7e-145 521.2 962 36.5
Glyma.02G000100 Glycine max HOM05D002969 ORTHO05D003308 2.2e-145 520.8 945 36.1
Glyma.19G263900 Glycine max HOM05D002969 ORTHO05D003308 2.2e-145 520.8 949 36.5
Eucgr.J02821 Eucalyptus grandis HOM05D002969 ORTHO05D003308 1.4e-144 518.1 952 36.2
Medtr3g005240 Medicago truncatula HOM05D002969 ORTHO05D003308 1.4e-144 518.1 936 35.7
TPR.G25535 Trifolium pratense HOM05D002969 ORTHO05D003308 1.9e-144 517.7 934 36.1
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 7.0e-144 515.8 921 37.5
Atru.chr1.3951 Acer truncatum HOM05D002969 ORTHO05D003308 1.2e-143 515.0 963 36.4
Lsat_1_v5_gn_5_75740 Lactuca sativa HOM05D002969 ORTHO05D003308 1.7e-142 511.1 937 36.2
SGA_v2.0_scaffold71G23857 Striga asiatica HOM05D002969 ORTHO05D003308 3.0e-142 510.4 956 36.1
MBI06_g12843_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 6.6e-142 509.2 930 36.8
DCAR_016128 Daucus carota HOM05D002969 ORTHO05D003308 2.1e-140 504.2 951 37.1
Sed0027017 Sechium edule HOM05D002969 ORTHO05D003308 1.4e-139 501.5 965 36.8
Manes.11G021000 Manihot esculenta HOM05D002969 ORTHO05D003308 2.3e-139 500.7 946 36.3
Cc02_g14940 Coffea canephora HOM05D002969 ORTHO05D003308 3.1e-139 500.4 972 35.2
ClCG05G007230 Citrullus lanatus HOM05D002969 ORTHO05D003308 5.2e-139 499.6 947 35.4
Peaxi162Scf00068g02519 Petunia axillaris HOM05D002969 ORTHO05D003308 1.5e-138 498.0 953 37.6
Migut.I01069 Erythranthe guttata HOM05D002969 ORTHO05D003308 2.0e-138 497.7 945 36.3
Lsat_1_v5_gn_1_38040 Lactuca sativa HOM05D002969 ORTHO05D003308 7.5e-138 495.7 923 36.4
CANSAT54G2721 Cannabis sativa HOM05D002969 ORTHO05D003308 2.2e-137 494.2 792 38.9
Solyc09g009800.3 Solanum lycopersicum HOM05D002969 ORTHO05D003308 2.9e-137 493.8 952 35.4
Nitab4.5_0000794g0160 Nicotiana tabacum HOM05D002969 ORTHO05D003308 6.4e-137 492.7 960 36.2
Sopen09g004560 Solanum pennellii HOM05D002969 ORTHO05D003308 1.4e-136 491.5 954 35.4
HanXRQChr10g0301861 Helianthus annuus HOM05D002969 ORTHO05D003308 3.2e-136 490.3 940 35.5
ECA240G4395 Erigeron canadensis HOM05D002969 ORTHO05D003308 1.6e-135 488.0 964 35.3
AUR62010285 Chenopodium quinoa HOM05D002969 ORTHO05D003308 4.6e-135 486.5 915 37.6
ECA247G3059 Erigeron canadensis HOM05D002969 ORTHO05D003308 1.3e-134 485.0 963 36.4
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea HOM05D002969 ORTHO05D003308 8.6e-134 482.3 933 35.8
Glyma.16G219900 Glycine max HOM05D002969 ORTHO05D003308 1.5e-133 481.5 972 34.3
MSTRG.10956 Avicennia marina HOM05D002969 ORTHO05D003308 1.9e-133 481.1 949 34.6
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea HOM05D002969 ORTHO05D003308 1.2e-132 478.4 928 35.6
THA.LOC104813957 Tarenaya hassleriana HOM05D002969 ORTHO05D003308 4.7e-132 476.5 960 35.6
COL.COLO4_27975 Corchorus olitorius HOM05D002969 ORTHO05D003308 3.1e-131 473.8 891 36.0
AL2G17610 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 4.0e-131 473.4 919 36.7
EL10Ac9g22289 Beta vulgaris HOM05D002969 ORTHO05D003308 5.8e-130 469.5 921 35.9
AT1G17450 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 2.9e-129 467.2 949 35.1
Phvul.007G234600 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 6.4e-129 466.1 1006 32.8
PGR102G0955 Punica granatum HOM05D002969 ORTHO05D003308 3.2e-128 463.8 957 34.5
SalBow6G7155 Salvia bowleyana HOM05D002969 ORTHO05D003308 3.2e-128 463.8 998 34.7
CARHR018040 Cardamine hirsuta HOM05D002969 ORTHO05D003308 7.8e-127 459.1 950 34.2
CAN.G397.51 Capsicum annuum HOM05D002969 ORTHO05D003308 2.3e-126 457.6 913 35.5
AUR62039104 Chenopodium quinoa HOM05D002969 ORTHO05D003308 6.6e-126 456.1 928 37.2
DCAR_022697 Daucus carota HOM05D002969 ORTHO05D003308 6.6e-126 456.1 966 34.4
Aa31LG7G2260 Aethionema arabicum HOM05D002969 ORTHO05D003308 1.9e-125 454.5 953 34.4
Carub.0002s0593 Capsella rubella HOM05D002969 ORTHO05D003308 5.6e-125 453.0 953 32.7
A07p07070 Brassica napus HOM05D002969 ORTHO05D003308 7.3e-125 452.6 939 34.3
AL1G29730 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 2.1e-124 451.1 947 34.2
Carub.0001s1721 Capsella rubella HOM05D002969 ORTHO05D003308 4.7e-124 449.9 947 33.9
MBI06_g44919_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 1.4e-123 448.4 958 34.9
Oeu007563.1 Olea europaea HOM05D002969 ORTHO05D003308 1.8e-123 448.0 787 37.4
Sp3g22890 Schrenkiella parvula HOM05D002969 ORTHO05D003308 6.8e-123 446.0 948 33.3
BcaB06g26734 Brassica carinata HOM05D002969 ORTHO05D003308 3.2e-120 437.2 945 34.3
BcaC06g35804 Brassica carinata HOM05D002969 ORTHO05D003308 2.7e-119 434.1 918 34.4
Thhalv10017997m.g Eutrema salsugineum HOM05D002969 ORTHO05D003308 2.7e-119 434.1 962 33.3
Ah.01g009920 Amaranthus hybridus HOM05D002969 ORTHO05D003308 1.2e-114 418.7 872 34.1
BraA07t28494Z Brassica rapa HOM05D002969 ORTHO05D003308 1.2e-114 418.7 904 33.6
CiPaw.01G219300 Carya illinoinensis HOM05D002969 ORTHO05D003308 2.0e-114 417.9 720 39.3
BolC7t41532H Brassica oleracea HOM05D002969 ORTHO05D003308 4.4e-114 416.8 907 33.7
Sc18g0005650 Simmondsia chinensis HOM05D002969 ORTHO05D003308 1.2e-111 408.7 878 34.3
Ah.01g018170 Amaranthus hybridus HOM05D002969 ORTHO05D003308 6.0e-111 406.4 879 35.5
Dinv30673 Davidia involucrata HOM05D002969 ORTHO05D003308 4.3e-109 400.2 661 40.7
Dinv34333 Davidia involucrata HOM05D002969 ORTHO05D003308 4.3e-109 400.2 661 40.7
ATR0618G078 Amborella trichopoda HOM05D002969 ORTHO05D003308 3.6e-108 397.1 866 35.0
PSO017G1981 Papaver somniferum HOM05D002969 ORTHO05D003308 8.1e-108 396.0 590 41.9
Lj5C38T4 Lonicera japonica HOM05D002969 ORTHO05D003308 1.8e-107 394.8 910 34.3
PSO210G1276 Papaver somniferum HOM05D002969 ORTHO05D003308 1.3e-105 388.7 663 39.1
Ah.01g009880 Amaranthus hybridus HOM05D002969 ORTHO05D003308 1.4e-104 385.2 858 33.4
Peaxi162Scf00559g00315 Petunia axillaris HOM05D002969 ORTHO05D003308 6.0e-103 379.8 854 33.5
Os02g0633100 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 5.1e-102 376.7 970 31.1
AT1G58766 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 6.7e-102 376.3 685 36.2
AT1G59077 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 6.7e-102 376.3 685 36.2
AT1G59453 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 6.7e-102 376.3 685 36.2
C07p10660 Brassica napus HOM05D002969 ORTHO05D003308 1.3e-100 372.1 875 32.5
Prupe.8G262800 Prunus persica HOM05D002969 ORTHO05D003308 9.6e-93 345.9 835 30.9
Zm00001eb254800 Zea mays HOM05D002969 ORTHO05D003308 4.1e-91 340.5 744 33.2
Peaxi162Scf00006g00210 Petunia axillaris HOM05D002969 ORTHO05D003308 1.4e-83 315.5 710 33.8
Nitab4.5_0010825g0010 Nicotiana tabacum HOM05D002969 ORTHO05D003308 1.4e-78 298.9 818 31.3
MD11G1308600 Malus domestica HOM05D002969 ORTHO05D003308 8.8e-78 296.2 774 31.4
SEGI_12678 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 8.8e-78 296.2 710 31.7
Pp3c4_16500 Physcomitrium patens HOM05D002969 ORTHO05D003308 4.3e-77 293.9 1048 27.9
Phvul.011G011400 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 4.1e-75 287.3 826 28.6
Cpa.g.sc34.72 Carica papaya HOM05D002969 ORTHO05D003308 1.5e-74 285.4 582 34.9
vmacro15026 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 5.0e-73 280.4 477 39.4
SMO119G0293 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 2.7e-71 274.6 945 26.8
AagrBONN_evm.TU.Sc2ySwM_344.4533 Anthoceros agrestis HOM05D002969 ORTHO05D003308 2.9e-65 254.6 963 27.6
Duzib192G0334 Durio zibethinus HOM05D002969 ORTHO05D003308 1.2e-63 249.2 909 26.7
unitig_26.g8927 Utricularia gibba HOM05D002969 ORTHO05D003308 1.2e-63 249.2 613 32.3
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.3e-62 245.0 929 25.6
RcHm_v2.0_Chr6g0291551 Rosa chinensis HOM05D002969 ORTHO05D003308 8.8e-62 243.0 813 28.3
Atru.chr4.3098 Acer truncatum HOM05D002969 ORTHO05D003308 3.3e-61 241.1 464 36.0
vmacro15029 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 2.8e-60 238.0 439 35.3
CAN.G947.7 Capsicum annuum HOM05D002969 ORTHO05D000105 3.1e-59 234.6 520 32.5
SMO196G0130 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 1.6e-58 232.3 894 26.2
FAN24G1542 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.6e-58 231.5 779 27.9
TWI31G0627 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 2.9e-57 228.0 919 25.4
FvH4_2g23920 Fragaria vesca HOM05D002969 ORTHO05D003308 3.6e-55 221.1 779 27.5
Cfa003558 Carpinus fangiana HOM05D002969 ORTHO05D003308 1.0e-49 203.0 794 26.7
Mapoly0002s0195 Marchantia polymorpha HOM05D002969 ORTHO05D003308 1.0e-49 203.0 1157 22.3
Haze_15990 Corylus avellana HOM05D002969 ORTHO05D003308 2.2e-49 201.8 779 26.2
FAN15G1247 Fragaria x ananassa HOM05D002969 ORTHO05D003308 2.5e-48 198.4 774 26.7
HPP92_011314 Vanilla planifolia HOM05D002969 ORTHO05D003308 3.0e-46 191.4 431 30.2
Zm00001eb254720 Zea mays HOM05D002969 ORTHO05D003308 8.8e-46 189.9 442 31.2
Glyma.19G019300 Glycine max HOM05D002969 ORTHO05D003308 1.4e-43 182.6 217 45.6
Thecc.06G115400 Theobroma cacao HOM05D002969 ORTHO05D003308 5.9e-42 177.2 885 24.4
Zm00001eb247940 Zea mays HOM05D002969 ORTHO05D003308 1.6e-39 169.1 288 39.2
PGSC0003DMG401008881 Solanum tuberosum HOM05D002969 ORTHO05D003308 2.3e-38 165.2 293 36.9
Aqoxy4G01957 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 1.5e-37 162.5 307 38.1
Zm00001eb254630 Zea mays HOM05D002969 ORTHO05D003308 4.1e-35 154.5 413 28.6
Psat0s1819g0040 Pisum sativum HOM05D002969 ORTHO05D003308 1.5e-32 146.0 573 24.6
Psat5g267240 Pisum sativum HOM05D002969 ORTHO05D003308 1.5e-32 146.0 573 24.6
FAN27G1917 Fragaria x ananassa HOM05D002969 ORTHO05D003308 5.6e-32 144.1 801 23.6
Zm00001eb254750 Zea mays HOM05D002969 ORTHO05D003308 1.4e-30 139.4 444 31.1
COL.COLO4_30697 Corchorus olitorius HOM05D002969 ORTHO05D003308 9.8e-29 133.3 276 34.1
Glyma.17G219802 Glycine max HOM05D002969 ORTHO05D003308 9.2e-27 126.7 137 49.6
SEGI_00835 Sequoiadendron giganteum HOM05D002969 ORTHO05D011582 1.2e-23 116.3 287 29.3
BcaC06g34331 Brassica carinata HOM05D002969 ORTHO05D003308 1.6e-23 115.9 132 44.7
BolC7t43569H Brassica oleracea HOM05D002969 ORTHO05D003308 1.6e-23 115.9 132 44.7
PSO700G0258 Papaver somniferum HOM05D002969 ORTHO05D003308 2.1e-23 115.5 195 38.5
Gohir.A01G106450 Gossypium hirsutum HOM05D002969 ORTHO05D003308 8.9e-22 110.2 255 30.2
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 1.2e-21 109.8 59 89.8
C07p30270 Brassica napus HOM05D002969 ORTHO05D003308 4.4e-21 107.8 86 57.0
Zm00001eb254760 Zea mays HOM05D002969 ORTHO05D003308 2.2e-20 105.5 320 28.1
ATR0568G030 Amborella trichopoda HOM05D002969 ORTHO05D003308 4.9e-20 104.4 237 34.2
Zm00001eb254710 Zea mays HOM05D002969 ORTHO05D003308 2.7e-18 98.6 144 41.7
Peaxi162Scf00006g00026 Petunia axillaris HOM05D002969 ORTHO05D003308 7.8e-18 97.1 179 36.3
Gorai.010G233800 Gossypium raimondii HOM05D002969 ORTHO05D003308 2.3e-17 95.5 197 33.5
Dinv30672 Davidia involucrata HOM05D002969 ORTHO05D003308 3.9e-17 94.7 205 35.1
Dinv34332 Davidia involucrata HOM05D002969 ORTHO05D003308 3.9e-17 94.7 205 35.1
Gohir.D06G200300 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.9e-16 92.4 197 33.0
Medtr8g062660 Medicago truncatula HOM05D000007 ORTHO05D003308 9.5e-16 90.1 197 34.5
Zm00001eb047190 Zea mays HOM05D002969 ORTHO05D003308 8.1e-15 87.0 130 40.0
Gohir.A06G192400 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.1e-14 86.7 98 45.9
Zm00001eb011340 Zea mays HOM05D002969 ORTHO05D003308 2.3e-14 85.5 80 52.5
Zm00001eb247930 Zea mays HOM05D002969 ORTHO05D003308 2.3e-14 85.5 168 30.4
Cpa.g.sc34.70 Carica papaya HOM05D002969 ORTHO05D003308 5.2e-14 84.3 50 70.0
Migut.E00647 Erythranthe guttata HOM05D002969 ORTHO05D003308 1.2e-13 83.2 89 48.3
Gorai.002G118300 Gossypium raimondii HOM05D002969 ORTHO05D003308 5.4e-11 74.3 207 29.0
VMungo0540G1895 Vigna mungo HOM05D002969 ORTHO05D003308 1.0e-09 70.1 63 52.4
Lalb_Chr10g0094381 Lupinus albus HOM05D002969 ORTHO05D003308 1.2e-07 63.2 55 58.2
MELO3C006797.2 Cucumis melo HOM05D002969 ORTHO05D003308 8.1e-07 60.5 77 45.5
Gohir.D01G092950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.8e-06 59.3 207 25.6
SEGI_24599 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 2.4e-06 58.9 47 61.7
Rhsim08G0220000 Rhododendron simsii HOM05D002969 ORTHO05D003308 3.1e-06 58.5 307 24.1
Dinv04036 Davidia involucrata HOM05D002969 ORTHO05D003308 8.9e-06 57.0 40 65.0
Rhsim08G0238600 Rhododendron simsii HOM05D042098 ORTHO05D003308 8.9e-06 57.0 237 27.8


User provided reference genes

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