Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2034 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 4.2e-301 1037.3 560 100.0
MBI06_g29318_MAGBIO Magnolia biondii HOM05D003548 ORTHO05D004066 1.6e-26 125.2 284 37.0
CSS0042414 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 5.7e-24 116.7 297 36.4
CSS0019271 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 7.5e-24 116.3 297 36.4
Nn1g01756 Nelumbo nucifera HOM05D003548 ORTHO05D004066 4.1e-22 110.5 297 37.0
CAN.G532.68 Capsicum annuum HOM05D003548 ORTHO05D004066 2.0e-21 108.2 292 36.6
Hma1.2p1_0216F.1_g091270 Hydrangea macrophylla HOM05D003548 ORTHO05D004066 2.0e-21 108.2 301 34.9
Aqoxy5G04044 Aquilegia oxysepala HOM05D003548 ORTHO05D004066 1.0e-20 105.9 281 40.2
Sabra01G0072500 Salix brachista HOM05D003548 ORTHO05D004066 1.0e-20 105.9 298 35.2
Phvul.002G294600 Phaseolus vulgaris HOM05D003548 ORTHO05D004066 3.9e-20 104.0 295 37.3
MD06G1096100 Malus domestica HOM05D003548 ORTHO05D004066 6.6e-20 103.2 293 36.2
Cc08_g15520 Coffea canephora HOM05D003548 ORTHO05D004066 8.6e-20 102.8 296 33.4
CANSAT21G0595 Cannabis sativa HOM05D003548 ORTHO05D004066 2.5e-19 101.3 294 36.4
MD14G1116300 Malus domestica HOM05D003548 ORTHO05D004066 2.5e-19 101.3 294 35.7
Potri.001G097200 Populus trichocarpa HOM05D003548 ORTHO05D004066 2.5e-19 101.3 298 35.2
Prupe.5G110700 Prunus persica HOM05D003548 ORTHO05D004066 5.6e-19 100.1 297 34.7
Peaxi162Scf00074g00156 Petunia axillaris HOM05D003548 ORTHO05D004066 9.5e-19 99.4 295 35.9
Sed0003878 Sechium edule HOM05D003548 ORTHO05D004066 3.6e-18 97.4 293 36.2
ClCG01G002150 Citrullus lanatus HOM05D003548 ORTHO05D004066 3.1e-17 94.4 291 33.7
MELO3C005727.2 Cucumis melo HOM05D003548 ORTHO05D004066 4.0e-17 94.0 289 33.9
CsaV3_5G002270 Cucumis sativus L. HOM05D003548 ORTHO05D004066 4.0e-17 94.0 287 34.1
DCAR_008526 Daucus carota HOM05D003548 ORTHO05D004066 5.2e-17 93.6 285 34.4
Dinv38885 Davidia involucrata HOM05D003548 ORTHO05D004066 8.9e-17 92.8 298 33.9
Medtr8g099105 Medicago truncatula HOM05D003548 ORTHO05D004066 2.0e-16 91.7 296 33.8
Dinv37570 Davidia involucrata HOM05D003548 ORTHO05D004066 4.4e-16 90.5 301 32.9
Sed0010954 Sechium edule HOM05D003548 ORTHO05D004066 5.8e-16 90.1 297 33.7
MBI07_g38645_MAGBIO Magnolia biondii HOM05D003548 ORTHO05D004066 9.8e-16 89.4 286 32.2
TPR.G3387 Trifolium pratense HOM05D000059 ORTHO05D004066 1.3e-15 89.0 292 33.6
Sopen08g030060 Solanum pennellii HOM05D003548 ORTHO05D004066 3.7e-15 87.4 300 32.0
Nitab4.5_0002944g0150 Nicotiana tabacum HOM05D003548 ORTHO05D004066 8.3e-15 86.3 280 33.6
Oeu042375.2 Olea europaea HOM05D003548 ORTHO05D004066 1.4e-14 85.5 291 35.1
Glyma.01G223400 Glycine max HOM05D003548 ORTHO05D004066 3.2e-14 84.3 294 35.4
QL02p032544 Quercus lobata HOM05D003548 ORTHO05D004066 4.1e-14 84.0 291 32.3
PGR042G3215 Punica granatum HOM05D003548 ORTHO05D004066 5.4e-14 83.6 211 38.4
Glyma.05G213300 Glycine max HOM05D003548 ORTHO05D004066 9.2e-14 82.8 297 33.3
Haze_08718 Corylus avellana HOM05D003548 ORTHO05D004066 2.7e-13 81.3 294 33.3
TWI81G0889 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 2.7e-13 81.3 297 30.3
Gorai.006G208300 Gossypium raimondii HOM05D003548 ORTHO05D004066 4.6e-13 80.5 293 30.7
TAR636G0920 Trochodendron aralioides HOM05D003548 ORTHO05D004066 4.6e-13 80.5 297 31.0
Thhalv10023333m.g Eutrema salsugineum HOM05D003548 ORTHO05D004066 6.0e-13 80.1 295 33.2
Gohir.D09G185600 Gossypium hirsutum HOM05D003548 ORTHO05D004066 6.0e-13 80.1 293 30.7
GSVIVG01028755001 Vitis vinifera HOM05D003548 ORTHO05D004066 6.0e-13 80.1 248 32.7
Migut.A00697 Erythranthe guttata HOM05D003548 ORTHO05D004066 7.8e-13 79.7 287 29.3
VMungo0251G1700 Vigna mungo HOM05D003548 ORTHO05D004066 1.0e-12 79.3 297 32.3
COL.COLO4_08334 Corchorus olitorius HOM05D003548 ORTHO05D004066 1.3e-12 79.0 294 31.6
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 1.7e-12 78.6 288 31.9
Solyc08g081760.3 Solanum lycopersicum HOM05D003548 ORTHO05D004066 3.9e-12 77.4 297 30.3
Eucgr.E00807 Eucalyptus grandis HOM05D003548 ORTHO05D004066 5.0e-12 77.0 289 32.2
Sp2g00590 Schrenkiella parvula HOM05D003548 ORTHO05D004066 5.0e-12 77.0 294 33.7
AL2G10890 Arabidopsis lyrata HOM05D003548 ORTHO05D004066 1.5e-11 75.5 294 33.3
ECA246G0635 Erigeron canadensis HOM05D003548 ORTHO05D004066 1.9e-11 75.1 256 34.0
Gohir.A09G191100 Gossypium hirsutum HOM05D003548 ORTHO05D004066 2.5e-11 74.7 293 30.0
GSVIVG01019448001 Vitis vinifera HOM05D003548 ORTHO05D004066 3.3e-11 74.3 292 30.5
Carub.0002s0067 Capsella rubella HOM05D003548 ORTHO05D004066 7.3e-11 73.2 284 33.1
Glyma.08G019800 Glycine max HOM05D003548 ORTHO05D004066 7.3e-11 73.2 298 29.9
HanXRQChr17g0533931 Helianthus annuus HOM05D003548 ORTHO05D004066 7.3e-11 73.2 262 31.3
Thecc.03G289200 Theobroma cacao HOM05D003548 ORTHO05D004066 9.5e-11 72.8 293 31.7
CiPaw.12G087100 Carya illinoinensis HOM05D003548 ORTHO05D004066 1.2e-10 72.4 287 30.3
AT1G64140 Arabidopsis thaliana HOM05D003548 ORTHO05D004066 1.6e-10 72.0 296 31.4
Cfa012267 Carpinus fangiana HOM05D003548 ORTHO05D004066 1.6e-10 72.0 294 30.3
DCAR_006852 Daucus carota HOM05D003548 ORTHO05D004066 1.6e-10 72.0 285 32.3
Cpa.g.sc321.2 Carica papaya HOM05D003548 ORTHO05D004066 2.1e-10 71.6 145 39.3
TAR629G2865 Trochodendron aralioides HOM05D003548 ORTHO05D004066 2.1e-10 71.6 169 36.7
unitig_32.g11608 Utricularia gibba HOM05D003548 ORTHO05D004066 2.1e-10 71.6 291 32.6
ECA233G1322 Erigeron canadensis HOM05D003548 ORTHO05D004066 3.6e-10 70.9 225 37.3
Atru.chr9.2080 Acer truncatum HOM05D003548 ORTHO05D004066 4.7e-10 70.5 295 29.8
Psat7g029120 Pisum sativum HOM05D003548 ORTHO05D004066 4.7e-10 70.5 284 32.4
Dinv28355 Davidia involucrata HOM05D003548 ORTHO05D004066 6.2e-10 70.1 281 31.7
Oeu042369.1 Olea europaea HOM05D003548 ORTHO05D004066 6.2e-10 70.1 169 39.6
TWI60G0243 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 6.2e-10 70.1 289 31.5
THA.LOC104809354 Tarenaya hassleriana HOM05D003548 ORTHO05D004066 1.1e-09 69.3 290 29.7
Nitab4.5_0005339g0010 Nicotiana tabacum HOM05D003548 ORTHO05D004066 1.4e-09 68.9 284 31.3
TWI15G1126 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 1.4e-09 68.9 298 29.2
FAN13G0102 Fragaria x ananassa HOM05D003548 ORTHO05D004066 4.0e-09 67.4 137 40.1
FAN13G1218 Fragaria x ananassa HOM05D003548 ORTHO05D004066 5.2e-09 67.0 137 40.1
RcHm_v2.0_Chr7g0196081 Rosa chinensis HOM05D003548 ORTHO05D004066 5.2e-09 67.0 137 40.9
Gohir.D03G080300 Gossypium hirsutum HOM05D003548 ORTHO05D004066 1.2e-08 65.9 294 30.3
PSO063G3847 Papaver somniferum HOM05D003548 ORTHO05D004066 1.5e-08 65.5 294 30.3
FvH4_5g03650 Fragaria vesca HOM05D003548 ORTHO05D004066 2.6e-08 64.7 137 39.4
Gorai.003G083700 Gossypium raimondii HOM05D003548 ORTHO05D004066 3.4e-08 64.3 294 31.0
Lj4g0009292 Lotus japonicus HOM05D003548 ORTHO05D004066 4.4e-08 63.9 290 29.3
PSO170G6721 Papaver somniferum HOM05D003548 ORTHO05D004066 4.4e-08 63.9 294 29.6
Ca_10964_v3 Cicer arietinum L. HOM05D003548 ORTHO05D004066 5.8e-08 63.5 281 30.6
Peaxi162Scf00102g01614 Petunia axillaris HOM05D003548 ORTHO05D004066 7.5e-08 63.2 311 29.6
Sabra03G0096600 Salix brachista HOM05D003548 ORTHO05D004066 9.8e-08 62.8 131 33.6
BcaC04g22534 Brassica carinata HOM05D003548 ORTHO05D004066 1.3e-07 62.4 297 28.6
C09p18070 Brassica napus HOM05D003548 ORTHO05D004066 1.3e-07 62.4 297 28.6
BolC9t54704H Brassica oleracea HOM05D003548 ORTHO05D004066 1.3e-07 62.4 162 36.4
Duzib205G0585 Durio zibethinus HOM05D003548 ORTHO05D004066 1.3e-07 62.4 296 29.7
FAN04G1462 Fragaria x ananassa HOM05D003548 ORTHO05D004066 1.7e-07 62.0 137 38.0
FAN04G2241 Fragaria x ananassa HOM05D003548 ORTHO05D004066 1.7e-07 62.0 137 38.0
CDE04G3080 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 2.2e-07 61.6 127 37.8
FAN18G1037 Fragaria x ananassa HOM05D003548 ORTHO05D004066 2.9e-07 61.2 137 38.0
ATR1131G034 Amborella trichopoda HOM05D003548 ORTHO05D004066 3.7e-07 60.8 111 38.7
PGSC0003DMG400012172 Solanum tuberosum HOM05D003548 ORTHO05D004066 4.9e-07 60.5 299 29.8
GSVIVG01003094001 Vitis vinifera HOM05D003548 ORTHO05D004066 4.9e-07 60.5 115 42.6
Gohir.A02G103700 Gossypium hirsutum HOM05D003548 ORTHO05D004066 8.3e-07 59.7 299 29.8
Potri.003G134200 Populus trichocarpa HOM05D003548 ORTHO05D004066 8.3e-07 59.7 296 26.7
MBI07_g06320_MAGBIO Magnolia biondii HOM05D003548 ORTHO05D004066 1.1e-06 59.3 126 38.1
CSS0034195 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 1.4e-06 58.9 136 33.8
VMungo1215G2254 Vigna mungo HOM05D003548 ORTHO05D004066 1.4e-06 58.9 268 30.6
CiPaw.11G126900 Carya illinoinensis HOM05D003548 ORTHO05D004066 2.4e-06 58.2 295 29.2
PGSC0003DMG400028194 Solanum tuberosum HOM05D003548 ORTHO05D004066 2.4e-06 58.2 114 36.0
HPP92_023971 Vanilla planifolia HOM05D003548 ORTHO05D004066 3.2e-06 57.8 119 35.3
HanXRQChr06g0166281 Helianthus annuus HOM05D003548 ORTHO05D004066 4.1e-06 57.4 212 33.0
Actinidia34177 Actinidia chinensis HOM05D003548 ORTHO05D004066 7.0e-06 56.6 144 31.9
Aqoxy7G00221 Aquilegia oxysepala HOM05D003548 ORTHO05D004066 7.0e-06 56.6 253 29.2
Hma1.2p1_0142F.1_g064160 Hydrangea macrophylla HOM05D003548 ORTHO05D004066 7.0e-06 56.6 113 36.3
PGR031G0552 Punica granatum HOM05D003548 ORTHO05D004066 7.0e-06 56.6 271 28.8
Duzib084G0464 Durio zibethinus HOM05D003548 ORTHO05D004066 9.2e-06 56.2 132 34.8


User provided reference genes

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