Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2021 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 1.6e-180 636.0 309 100.0
CDE06G0863 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 3.3e-162 575.1 292 94.5
TAR629G2423 Trochodendron aralioides HOM05D004150 ORTHO05D005087 1.1e-122 443.7 295 71.5
TAR627G0919 Trochodendron aralioides HOM05D004150 ORTHO05D005087 2.4e-120 436.0 295 70.2
Nn6g34456 Nelumbo nucifera HOM05D004150 ORTHO05D005087 1.3e-118 430.3 294 69.7
Hma1.2p1_2701F.1_g327060 Hydrangea macrophylla HOM05D004150 ORTHO05D005087 4.6e-116 421.8 294 67.3
Dinv15009 Davidia involucrata HOM05D004150 ORTHO05D005087 6.0e-116 421.4 294 68.0
CSS0001873 Camellia sinensis var. sinensis HOM05D004150 ORTHO05D005087 1.3e-115 420.2 296 66.9
MBI06_g16571_MAGBIO Magnolia biondii HOM05D004150 ORTHO05D005087 3.6e-113 412.1 298 67.1
GSVIVG01014152001 Vitis vinifera HOM05D004150 ORTHO05D005087 8.1e-113 411.0 294 67.7
CSS0042666 Camellia sinensis var. sinensis HOM05D004150 ORTHO05D005087 1.4e-112 410.2 293 67.6
Cfa019528 Carpinus fangiana HOM05D004150 ORTHO05D005087 1.3e-110 403.7 296 65.2
Cc05_g10890 Coffea canephora HOM05D004150 ORTHO05D005087 1.3e-110 403.7 294 65.0
PSO170G1443 Papaver somniferum HOM05D004150 ORTHO05D005087 8.4e-110 401.0 306 65.4
Oeu058459.1 Olea europaea HOM05D004150 ORTHO05D005087 1.9e-109 399.8 295 64.4
Dinv18386 Davidia involucrata HOM05D004150 ORTHO05D005087 2.4e-109 399.4 294 66.0
MD03G1246300 Malus domestica HOM05D004150 ORTHO05D005087 3.2e-109 399.1 298 63.4
Prupe.4G158300 Prunus persica HOM05D004150 ORTHO05D005087 3.2e-109 399.1 298 63.8
PSO782G0021 Papaver somniferum HOM05D004150 ORTHO05D005087 2.1e-108 396.4 306 65.4
Manes.03G091700 Manihot esculenta HOM05D004150 ORTHO05D005087 2.7e-108 396.0 306 64.4
Glyma.13G266400 Glycine max HOM05D004150 ORTHO05D005087 7.9e-108 394.4 294 66.0
CiPaw.11G157600 Carya illinoinensis HOM05D004150 ORTHO05D005087 1.0e-107 394.0 296 63.2
Nn3g21055 Nelumbo nucifera HOM05D004150 ORTHO05D005087 1.3e-107 393.7 269 70.6
VMungo1080G1533 Vigna mungo HOM05D004150 ORTHO05D005087 1.3e-107 393.7 300 66.3
Potri.011G106600 Populus trichocarpa HOM05D004150 ORTHO05D005087 1.8e-107 393.3 300 65.0
Lj1A826G61 Lonicera japonica HOM05D004150 ORTHO05D005087 3.9e-107 392.1 305 63.6
SGA_v2.0_scaffold130G34274 Striga asiatica HOM05D004150 ORTHO05D005087 3.9e-107 392.1 297 63.3
Phvul.005G079200 Phaseolus vulgaris HOM05D004150 ORTHO05D005087 5.1e-107 391.7 298 65.8
MD11G1267300 Malus domestica HOM05D004150 ORTHO05D005087 6.7e-107 391.3 298 62.4
RcHm_v2.0_Chr5g0030011 Rosa chinensis HOM05D004150 ORTHO05D005087 1.5e-106 390.2 295 65.1
Lsat_1_v5_gn_9_100501 Lactuca sativa HOM05D004150 ORTHO05D005087 3.3e-106 389.0 298 64.1
Glyma.12G231700 Glycine max HOM05D004150 ORTHO05D005087 5.6e-106 388.3 298 64.8
Oeu010027.3 Olea europaea HOM05D004150 ORTHO05D005087 1.6e-105 386.7 297 63.6
Potri.003G026500 Populus trichocarpa HOM05D004150 ORTHO05D005087 1.6e-105 386.7 298 64.4
MELO3C025660.2 Cucumis melo HOM05D004150 ORTHO05D005087 2.1e-105 386.3 294 63.9
Thecc.07G119700 Theobroma cacao HOM05D004150 ORTHO05D005087 3.7e-105 385.6 296 63.5
Potri.001G386700 Populus trichocarpa HOM05D004150 ORTHO05D005087 6.2e-105 384.8 298 64.8
CANSAT56G2087 Cannabis sativa HOM05D004150 ORTHO05D005087 1.4e-104 383.6 298 62.4
CsaV3_4G032910 Cucumis sativus L. HOM05D004150 ORTHO05D005087 2.4e-104 382.9 299 63.9
Aqoxy1G01964 Aquilegia oxysepala HOM05D004150 ORTHO05D005087 6.9e-104 381.3 296 62.8
TWI39G0561 Tripterygium wilfordii HOM05D004150 ORTHO05D005087 2.0e-103 379.8 299 61.9
Manes.15G097400 Manihot esculenta HOM05D004150 ORTHO05D005087 4.5e-103 378.6 297 62.6
Sc03g0010640 Simmondsia chinensis HOM05D004150 ORTHO05D005087 5.8e-103 378.3 298 59.7
Atru.chr2.2029 Acer truncatum HOM05D004150 ORTHO05D005087 7.6e-103 377.9 301 63.8
COL.COLO4_17523 Corchorus olitorius HOM05D004150 ORTHO05D005087 1.3e-102 377.1 296 61.8
TWI38G0344 Tripterygium wilfordii HOM05D004150 ORTHO05D005087 1.3e-102 377.1 299 62.5
Ca_03941_v3 Cicer arietinum L. HOM05D004150 ORTHO05D005087 1.7e-102 376.7 299 65.9
Psat5g234480 Pisum sativum HOM05D004150 ORTHO05D005087 1.7e-102 376.7 299 66.6
Ciclev10019972m.g Citrus clementina HOM05D004150 ORTHO05D005087 2.9e-102 375.9 303 63.7
Sabra11G0094900 Salix brachista HOM05D004150 ORTHO05D005087 3.8e-102 375.6 319 60.8
PGR083G0816 Punica granatum HOM05D004150 ORTHO05D005087 4.9e-102 375.2 301 61.1
Atru.chr2.2041 Acer truncatum HOM05D004150 ORTHO05D005087 6.5e-102 374.8 301 63.5
EL10Ac4g08396 Beta vulgaris HOM05D004150 ORTHO05D005087 6.5e-102 374.8 298 60.7
Gohir.D13G154200 Gossypium hirsutum HOM05D004150 ORTHO05D005087 8.4e-102 374.4 296 64.5
Sabra16G0254300 Salix brachista HOM05D004150 ORTHO05D005087 2.5e-101 372.9 333 60.4
ClCG11G017260 Citrullus lanatus HOM05D004150 ORTHO05D005087 3.2e-101 372.5 329 57.1
FvH4_3g17970 Fragaria vesca HOM05D004150 ORTHO05D005087 7.1e-101 371.3 299 61.2
Gohir.A13G149900 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.2e-100 370.5 296 63.5
Gorai.013G174200 Gossypium raimondii HOM05D004150 ORTHO05D005087 1.2e-100 370.5 296 63.5
Gohir.A01G052900 Gossypium hirsutum HOM05D004150 ORTHO05D005087 1.6e-100 370.2 296 62.2
MSTRG.14976 Avicennia marina HOM05D004150 ORTHO05D005087 2.7e-100 369.4 293 62.5
Gorai.002G053300 Gossypium raimondii HOM05D004150 ORTHO05D005087 2.7e-100 369.4 297 62.6
Nitab4.5_0000347g0180 Nicotiana tabacum HOM05D004150 ORTHO05D005087 6.0e-100 368.2 337 55.2
Eucgr.F01300 Eucalyptus grandis HOM05D004150 ORTHO05D005087 1.0e-99 367.5 306 59.8
CAN.G375.32 Capsicum annuum HOM05D004150 ORTHO05D005087 1.3e-99 367.1 339 55.2
FAN21G0088 Fragaria x ananassa HOM05D004150 ORTHO05D005087 1.3e-99 367.1 301 60.5
Gohir.D01G042500 Gossypium hirsutum HOM05D004150 ORTHO05D005087 3.9e-99 365.5 297 62.3
Sed0003063 Sechium edule HOM05D004150 ORTHO05D005087 5.1e-99 365.2 303 60.7
Medtr2g075340 Medicago truncatula HOM05D004150 ORTHO05D005087 8.7e-99 364.4 293 64.2
THA.LOC104810428 Tarenaya hassleriana HOM05D004150 ORTHO05D005087 2.5e-98 362.8 297 59.3
Actinidia21439 Actinidia chinensis HOM05D004150 ORTHO05D005087 7.4e-98 361.3 296 61.5
Peaxi162Scf00111g01477 Petunia axillaris HOM05D004150 ORTHO05D005087 4.8e-97 358.6 338 54.1
FAN16G0401 Fragaria x ananassa HOM05D004150 ORTHO05D005087 1.1e-96 357.5 317 56.8
FAN25G1025 Fragaria x ananassa HOM05D004150 ORTHO05D005087 1.1e-96 357.5 317 57.1
FAN11G2611 Fragaria x ananassa HOM05D004150 ORTHO05D005087 1.8e-96 356.7 318 57.2
Lj3g0004524 Lotus japonicus HOM05D004150 ORTHO05D005087 1.8e-96 356.7 302 63.2
PGSC0003DMG400007094 Solanum tuberosum HOM05D004150 ORTHO05D005087 2.4e-96 356.3 337 53.7
Solyc07g062250.3 Solanum lycopersicum HOM05D004150 ORTHO05D005087 3.1e-96 355.9 337 53.1
HanXRQChr10g0305531 Helianthus annuus HOM05D004150 ORTHO05D005087 5.3e-96 355.1 301 58.5
Sopen07g030520 Solanum pennellii HOM05D004150 ORTHO05D005087 9.0e-96 354.4 337 53.1
THA.LOC104815577 Tarenaya hassleriana HOM05D004150 ORTHO05D005087 1.5e-95 353.6 297 57.9
Lalb_Chr19g0133751 Lupinus albus HOM05D004150 ORTHO05D005087 2.0e-95 353.2 298 60.7
Migut.H02018 Erythranthe guttata HOM05D004150 ORTHO05D005087 4.5e-95 352.1 292 57.9
ATR0127G006 Amborella trichopoda HOM05D004150 ORTHO05D005087 1.7e-94 350.1 301 59.5
HanXRQChr17g0556791 Helianthus annuus HOM05D004150 ORTHO05D005087 1.9e-93 346.7 294 58.5
Rhsim04G0036400 Rhododendron simsii HOM05D004150 ORTHO05D005087 1.2e-92 344.0 305 59.7
Rhsim04G0035400 Rhododendron simsii HOM05D004150 ORTHO05D005087 3.5e-92 342.4 305 59.3
Aa31LG8G2040 Aethionema arabicum HOM05D004150 ORTHO05D005087 1.3e-91 340.5 295 58.0
Lalb_Chr25g0285681 Lupinus albus HOM05D004150 ORTHO05D005087 3.9e-91 339.0 297 60.6
Hma1.2p1_1650F.1_g295710 Hydrangea macrophylla HOM05D004150 ORTHO05D005087 1.9e-90 336.7 295 58.3
vmacro09408 Vaccinium macrocarpon HOM05D004150 ORTHO05D005087 1.9e-90 336.7 303 58.4
Lalb_Chr03g0031251 Lupinus albus HOM05D004150 ORTHO05D005087 2.5e-90 336.3 299 57.2
Actinidia12595 Actinidia chinensis HOM05D004150 ORTHO05D005087 5.7e-90 335.1 361 50.4
CARHR089770 Cardamine hirsuta HOM05D004150 ORTHO05D005087 6.3e-89 331.6 301 57.1
TPR.G13030 Trifolium pratense HOM05D004150 ORTHO05D005087 6.3e-89 331.6 303 59.4
CiPaw.12G111300 Carya illinoinensis HOM05D004150 ORTHO05D005087 6.9e-88 328.2 247 64.4
Thhalv10011465m.g Eutrema salsugineum HOM05D004150 ORTHO05D005087 1.5e-87 327.0 297 55.6
SalBow7G0391 Salvia bowleyana HOM05D004150 ORTHO05D005087 4.5e-87 325.5 269 59.5
ECA234G0958 Erigeron canadensis HOM05D004150 ORTHO05D005087 1.3e-86 323.9 297 54.2
AL3G27140 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 2.2e-86 323.2 300 56.0
AUR62019617 Chenopodium quinoa HOM05D004150 ORTHO05D005087 2.9e-86 322.8 274 58.4
Ah.04g164080 Amaranthus hybridus HOM05D004150 ORTHO05D005087 3.8e-86 322.4 278 55.8
BolC5t33929H Brassica oleracea HOM05D004150 ORTHO05D005087 5.0e-86 322.0 298 55.7
Duzib213G1096 Durio zibethinus HOM05D004150 ORTHO05D005087 5.0e-86 322.0 270 61.5
Sp1g39990 Schrenkiella parvula HOM05D004150 ORTHO05D005087 8.5e-86 321.2 301 56.5
C05p52450 Brassica napus HOM05D004150 ORTHO05D005087 1.4e-85 320.5 298 55.0
AT3G14830 Arabidopsis thaliana HOM05D004150 ORTHO05D005087 1.9e-85 320.1 301 55.1
BcaC05g29034 Brassica carinata HOM05D004150 ORTHO05D005087 5.5e-85 318.5 298 54.7
AUR62039606 Chenopodium quinoa HOM05D004150 ORTHO05D005087 5.5e-85 318.5 274 57.7
BcaB06g25355 Brassica carinata HOM05D004150 ORTHO05D005087 7.2e-85 318.2 298 55.4
BraA05t22282Z Brassica rapa HOM05D004150 ORTHO05D005087 1.4e-83 313.9 297 54.2
Carub.0003s1449 Capsella rubella HOM05D004150 ORTHO05D005087 3.9e-83 312.4 304 54.6
CARHR043670 Cardamine hirsuta HOM05D004150 ORTHO05D005087 2.5e-82 309.7 294 55.4
A05p34660 Brassica napus HOM05D004150 ORTHO05D005087 4.8e-81 305.4 298 53.7
Hund10457 Selenicereus undatus HOM05D004150 ORTHO05D005087 1.8e-80 303.5 273 55.7
BraA06t23329Z Brassica rapa HOM05D004150 ORTHO05D005087 9.1e-80 301.2 296 54.7
A06p01010 Brassica napus HOM05D004150 ORTHO05D005087 1.5e-79 300.4 296 54.4
Carub.0001s4264 Capsella rubella HOM05D004150 ORTHO05D005087 3.4e-79 299.3 291 52.2
AT1G53450 Arabidopsis thaliana HOM05D004150 ORTHO05D005087 7.7e-79 298.1 291 52.2
BcaC08g43529 Brassica carinata HOM05D004150 ORTHO05D005087 1.3e-78 297.4 296 53.7
BolC6t35999H Brassica oleracea HOM05D004150 ORTHO05D005087 1.3e-78 297.4 296 53.7
BcaB07g33329 Brassica carinata HOM05D004150 ORTHO05D005087 2.2e-78 296.6 293 52.9
C06p09220 Brassica napus HOM05D004150 ORTHO05D005087 7.9e-76 288.1 296 52.4
Zm00001eb361900 Zea mays HOM05D004150 ORTHO05D005087 1.7e-73 280.4 319 48.3
Os01g0729900 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 1.2e-71 274.2 312 45.2
Os05g0530300 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 1.0e-70 271.2 333 45.0
Zm00001eb154220 Zea mays HOM05D004150 ORTHO05D005087 1.3e-70 270.8 320 46.2
HPP92_005189 Vanilla planifolia HOM05D004150 ORTHO05D005087 3.6e-68 262.7 249 53.4
ECA240G3777 Erigeron canadensis HOM05D004150 ORTHO05D005087 4.4e-66 255.8 216 57.9
Zm00001eb293260 Zea mays HOM05D004150 ORTHO05D005087 4.4e-66 255.8 313 45.0
unitig_21.g20061 Utricularia gibba HOM05D004150 ORTHO05D005087 7.2e-61 238.4 294 44.2
Haze_09266 Corylus avellana HOM05D004150 ORTHO05D005087 7.2e-53 211.8 214 51.4
AagrBONN_evm.TU.Sc2ySwM_362.2802 Anthoceros agrestis HOM05D004150 ORTHO05D005087 2.7e-52 209.9 354 38.1
QL08p025853 Quercus lobata HOM05D004150 ORTHO05D005087 4.9e-49 199.1 113 78.8
Nitab4.5_0024430g0010 Nicotiana tabacum HOM05D004150 ORTHO05D005087 4.1e-48 196.1 109 80.7
Mapoly0001s0101 Marchantia polymorpha HOM05D004150 ORTHO05D005087 2.0e-47 193.7 376 35.4
SMO169G0186 Selaginella moellendorffii HOM05D004150 ORTHO05D005087 5.9e-47 192.2 108 74.1
Cpa.g.sc77.46 Carica papaya HOM05D004150 ORTHO05D005087 2.9e-46 189.9 105 80.0
Os06g0152800 Oryza sativa ssp. japonica HOM05D004150 ORTHO05D005087 5.2e-43 179.1 117 66.7
Pp3c9_8060 Physcomitrium patens HOM05D004150 ORTHO05D005087 2.6e-42 176.8 365 35.3
Zm00001eb271010 Zea mays HOM05D004150 ORTHO05D005087 9.8e-42 174.9 123 62.6
AL1G61960 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 1.3e-41 174.5 126 61.1
QL08p025867 Quercus lobata HOM05D004150 ORTHO05D005087 2.2e-41 173.7 190 51.1
Mapoly0030s0045 Marchantia polymorpha HOM05D004150 ORTHO05D005087 2.5e-37 160.2 350 34.6
Gohir.A02G079101 Gossypium hirsutum HOM05D004150 ORTHO05D005087 3.3e-37 159.8 139 60.4
DCAR_013267 Daucus carota HOM05D004150 ORTHO05D005087 2.1e-36 157.1 135 56.3
VMungo1309G1261 Vigna mungo HOM05D004150 ORTHO05D005087 1.3e-33 147.9 108 65.7
SEGI_28417 Sequoiadendron giganteum HOM05D004150 ORTHO05D005087 2.2e-33 147.1 289 34.3
AL1G62010 Arabidopsis lyrata HOM05D004150 ORTHO05D005087 8.3e-33 145.2 140 55.7
EL10Ac9g22809 Beta vulgaris HOM05D004150 ORTHO05D005087 8.3e-33 145.2 187 46.5
Actinidia33318 Actinidia chinensis HOM05D004150 ORTHO05D005087 3.0e-30 136.7 180 42.2
Aqoxy1G01962 Aquilegia oxysepala HOM05D004150 ORTHO05D005087 9.8e-26 121.7 134 51.5
BolC5t30531H Brassica oleracea HOM05D004150 ORTHO05D032065 2.9e-25 120.2 165 39.4
Haze_11864 Corylus avellana HOM05D004150 ORTHO05D005087 3.9e-22 109.8 150 41.3
VMungo0251G3124 Vigna mungo HOM05D004150 ORTHO05D005087 6.0e-15 85.9 66 63.6
CDE09G0238 Ceratophyllum demersum HOM05D004150 ORTHO05D005087 2.1e-12 77.4 105 42.9
Haze_09267 Corylus avellana HOM05D004150 ORTHO05D005087 4.6e-07 59.7 31 77.4
Haze_09268 Corylus avellana HOM05D004150 ORTHO05D005087 4.6e-07 59.7 31 77.4
Haze_09270 Corylus avellana HOM05D004150 ORTHO05D005087 4.6e-07 59.7 31 77.4


User provided reference genes

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