Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1981 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 1.5e-242 842.4 419 100.0
CDE08G0838 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 4.7e-39 166.4 164 59.1
TAR625G1059 Trochodendron aralioides HOM05D007736 ORTHO05D009783 6.8e-30 136.0 256 36.7
Nn1g06123 Nelumbo nucifera HOM05D007736 ORTHO05D009783 4.6e-26 123.2 121 47.1
Actinidia38961 Actinidia chinensis HOM05D007736 ORTHO05D009783 8.7e-25 119.0 246 34.1
Haze_10792 Corylus avellana HOM05D007736 ORTHO05D009783 4.7e-23 113.2 305 31.1
Sed0013332 Sechium edule HOM05D007736 ORTHO05D009783 4.7e-23 113.2 253 32.4
Sc16g0009620 Simmondsia chinensis HOM05D007736 ORTHO05D009783 3.1e-22 110.5 263 31.9
Cfa021836 Carpinus fangiana HOM05D007736 ORTHO05D009783 5.2e-22 109.8 305 30.5
COL.COLO4_20877 Corchorus olitorius HOM05D007736 ORTHO05D009783 5.2e-22 109.8 228 32.5
Dinv19331 Davidia involucrata HOM05D007736 ORTHO05D009783 5.2e-22 109.8 263 32.3
Lj5P244T47 Lonicera japonica HOM05D007736 ORTHO05D009783 5.2e-22 109.8 280 29.3
Sed0025125 Sechium edule HOM05D007736 ORTHO05D009783 1.2e-21 108.6 269 30.5
ClCG09G014560 Citrullus lanatus HOM05D007736 ORTHO05D009783 2.0e-21 107.8 247 33.2
Dinv24237 Davidia involucrata HOM05D007736 ORTHO05D009783 2.6e-21 107.5 264 31.1
Ciclev10028677m.g Citrus clementina HOM05D007736 ORTHO05D009783 3.4e-21 107.1 245 29.4
PGR142G3153 Punica granatum HOM05D007736 ORTHO05D009783 4.4e-21 106.7 271 32.1
Cc02_g21990 Coffea canephora HOM05D007736 ORTHO05D009783 5.8e-21 106.3 236 33.1
CsaV3_7G022310 Cucumis sativus L. HOM05D007736 ORTHO05D009783 5.8e-21 106.3 252 31.0
Thecc.02G144400 Theobroma cacao HOM05D007736 ORTHO05D009783 5.8e-21 106.3 228 32.0
MELO3C028798.2 Cucumis melo HOM05D007736 ORTHO05D009783 9.9e-21 105.5 252 31.0
Manes.04G057900 Manihot esculenta HOM05D007736 ORTHO05D009783 1.3e-20 105.1 248 34.3
Eucgr.I02697 Eucalyptus grandis HOM05D007736 ORTHO05D009783 2.2e-20 104.4 271 31.7
vmacro01801 Vaccinium macrocarpon HOM05D007736 ORTHO05D009783 4.9e-20 103.2 278 29.5
Potri.015G008200 Populus trichocarpa HOM05D007736 ORTHO05D009783 6.4e-20 102.8 323 29.1
CiPaw.05G040000 Carya illinoinensis HOM05D007736 ORTHO05D009783 4.2e-19 100.1 239 32.6
DCAR_021830 Daucus carota HOM05D007736 ORTHO05D009783 4.2e-19 100.1 232 33.6
Sabra15G0006300 Salix brachista HOM05D007736 ORTHO05D009783 4.2e-19 100.1 246 32.5
CAN.G523.104 Capsicum annuum HOM05D007736 ORTHO05D009783 7.1e-19 99.4 242 32.2
HanXRQChr16g0514111 Helianthus annuus HOM05D007736 ORTHO05D009783 7.1e-19 99.4 236 32.2
Solyc01g104790.4 Solanum lycopersicum HOM05D007736 ORTHO05D009783 7.1e-19 99.4 267 27.7
Potri.012G020400 Populus trichocarpa HOM05D007736 ORTHO05D009783 9.3e-19 99.0 246 31.3
Sopen01g047310 Solanum pennellii HOM05D007736 ORTHO05D009783 1.6e-18 98.2 262 28.2
Rhsim11G0133400 Rhododendron simsii HOM05D007736 ORTHO05D009783 3.5e-18 97.1 259 29.0
TAR381G1413 Trochodendron aralioides HOM05D007736 ORTHO05D009783 3.5e-18 97.1 95 52.6
Sabra12G0012700 Salix brachista HOM05D007736 ORTHO05D009783 6.0e-18 96.3 238 33.2
Actinidia00233 Actinidia chinensis HOM05D007736 ORTHO05D009783 7.8e-18 95.9 169 36.7
Lsat_1_v5_gn_5_106541 Lactuca sativa HOM05D007736 ORTHO05D009783 1.0e-17 95.5 252 30.2
PGSC0003DMG400029771 Solanum tuberosum HOM05D007736 ORTHO05D009783 2.3e-17 94.4 274 27.4
Lj6g0003665 Lotus japonicus HOM05D007736 ORTHO05D009783 3.9e-17 93.6 138 37.7
QL11p018598 Quercus lobata HOM05D007736 ORTHO05D009783 3.9e-17 93.6 252 32.1
VMungo0540G1970 Vigna mungo HOM05D007736 ORTHO05D009783 5.1e-17 93.2 123 40.7
Ah.06g188730 Amaranthus hybridus HOM05D007736 ORTHO05D009783 8.7e-17 92.4 404 27.0
Glyma.15G050700 Glycine max HOM05D007736 ORTHO05D009783 8.7e-17 92.4 334 27.5
Aqoxy4G00650 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 1.1e-16 92.0 355 24.8
Ca_00110_v3 Cicer arietinum L. HOM05D007736 ORTHO05D009783 1.1e-16 92.0 254 28.0
Medtr2g008130 Medicago truncatula HOM05D007736 ORTHO05D009783 1.1e-16 92.0 285 26.0
TWI14G1332 Tripterygium wilfordii HOM05D007736 ORTHO05D009783 1.5e-16 91.7 253 30.0
Prupe.7G056800 Prunus persica HOM05D007736 ORTHO05D009783 1.9e-16 91.3 173 33.5
unitig_26.g9583 Utricularia gibba HOM05D007736 ORTHO05D009783 1.9e-16 91.3 113 42.5
MD12G1255900 Malus domestica HOM05D007736 ORTHO05D009783 3.3e-16 90.5 119 37.8
Nitab4.5_0000249g0440 Nicotiana tabacum HOM05D007736 ORTHO05D009783 3.3e-16 90.5 264 28.4
Aqoxy5G02135 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 5.6e-16 89.7 352 24.4
MD04G1236600 Malus domestica HOM05D007736 ORTHO05D009783 5.6e-16 89.7 177 32.2
Psat1g218640 Pisum sativum HOM05D007736 ORTHO05D009783 5.6e-16 89.7 338 25.7
MSTRG.27826 Avicennia marina HOM05D007736 ORTHO05D009783 7.3e-16 89.4 306 27.1
Prupe.6G356600 Prunus persica HOM05D007736 ORTHO05D009783 7.3e-16 89.4 185 32.4
Hund21796 Selenicereus undatus HOM05D007736 ORTHO05D009783 9.6e-16 89.0 301 27.2
arahy.Tifrunner.gnm1.ann1.JZ71MD Arachis hypogaea HOM05D007736 ORTHO05D009783 2.8e-15 87.4 274 30.3
CDE08G0268 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 4.8e-15 86.7 42 92.9
Phvul.006G209200 Phaseolus vulgaris HOM05D007736 ORTHO05D009783 6.2e-15 86.3 285 27.4
arahy.Tifrunner.gnm1.ann1.40XV2D Arachis hypogaea HOM05D007736 ORTHO05D009783 8.1e-15 85.9 276 29.0
MSTRG.5252 Avicennia marina HOM05D007736 ORTHO05D009783 4.0e-14 83.6 134 38.1
Glyma.08G181600 Glycine max HOM05D007736 ORTHO05D009783 4.0e-14 83.6 212 30.7
Nitab4.5_0014357g0010 Nicotiana tabacum HOM05D007736 ORTHO05D009783 5.3e-14 83.2 277 27.8
Cpa.g.sc2.48 Carica papaya HOM05D007736 ORTHO05D009783 9.0e-14 82.4 300 29.3
ATR0772G143 Amborella trichopoda HOM05D007736 ORTHO05D009783 1.5e-13 81.6 209 28.7
AUR62006887 Chenopodium quinoa HOM05D007736 ORTHO05D009783 1.3e-12 78.6 249 28.1
FAN05G0165 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.3e-12 78.6 117 34.2
RcHm_v2.0_Chr3g0448601 Rosa chinensis HOM05D007736 ORTHO05D009783 1.3e-12 78.6 115 35.7
EL10Ac4g09677 Beta vulgaris HOM05D007736 ORTHO05D009783 2.2e-12 77.8 250 28.8
FvH4_6g01062 Fragaria vesca HOM05D000868 ORTHO05D000711 2.9e-12 77.4 117 34.2
FAN14G5928 Fragaria x ananassa HOM05D007736 ORTHO05D009783 2.9e-12 77.4 117 34.2
FAN05G0537 Fragaria x ananassa HOM05D007736 ORTHO05D009783 6.4e-12 76.3 117 34.2
FAN02G1431 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.1e-11 75.5 117 33.3
FAN09G0667 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.9e-11 74.7 118 33.1
Lalb_Chr20g0123201 Lupinus albus HOM05D007736 ORTHO05D009783 2.4e-11 74.3 120 35.8
ECA234G2384 Erigeron canadensis HOM05D007736 ORTHO05D009783 7.1e-11 72.8 237 29.5
Atru.chr6.1122 Acer truncatum HOM05D007736 ORTHO05D009783 9.3e-11 72.4 276 27.2
AUR62000538 Chenopodium quinoa HOM05D007736 ORTHO05D009783 1.2e-10 72.0 240 27.1
Migut.N01016 Erythranthe guttata HOM05D007736 ORTHO05D009783 2.1e-10 71.2 226 29.6
SGA_v2.0_scaffold45G17286 Striga asiatica HOM05D007736 ORTHO05D009783 3.5e-10 70.5 235 27.2
TPR.G19753 Trifolium pratense HOM05D007736 ORTHO05D009783 1.8e-09 68.2 148 29.7
Zm00001eb382360 Zea mays HOM05D007736 ORTHO05D009783 4.3e-08 63.5 108 36.1
Os06g0468400 Oryza sativa ssp. japonica HOM05D007736 ORTHO05D009783 3.7e-07 60.5 225 31.1
HPP92_001092 Vanilla planifolia HOM05D007736 ORTHO05D009783 1.4e-06 58.5 232 26.7
HanXRQChr10g0289121 Helianthus annuus HOM05D007736 ORTHO05D009783 4.0e-06 57.0 225 28.0


User provided reference genes

Program Settings