Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 8.4e-48 193.4 97 100.0
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 2.3e-29 132.1 85 83.5
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 1.3e-21 106.3 77 74.0
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 1.8e-21 105.9 81 71.6
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 2.3e-21 105.5 77 75.3
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 5.1e-21 104.4 77 72.7
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 5.1e-21 104.4 79 72.2
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 1.9e-20 102.4 77 72.7
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 1.9e-20 102.4 82 68.3
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 2.5e-20 102.1 78 73.1
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 3.3e-20 101.7 77 71.4
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 5.6e-20 100.9 87 67.8
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 7.4e-20 100.5 77 71.4
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 9.6e-20 100.1 77 72.7
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 9.6e-20 100.1 77 70.1
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 1.3e-19 99.8 77 70.1
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 1.6e-19 99.4 77 70.1
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 2.1e-19 99.0 77 70.1
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 2.8e-19 98.6 77 68.8
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 3.7e-19 98.2 77 68.8
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 3.7e-19 98.2 77 71.4
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 3.7e-19 98.2 77 68.8
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 4.8e-19 97.8 77 70.1
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 4.8e-19 97.8 77 70.1
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 4.8e-19 97.8 77 68.8
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 6.2e-19 97.4 77 68.8
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 8.2e-19 97.1 77 68.8
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 1.1e-18 96.7 77 67.5
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 1.8e-18 95.9 78 65.4
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 2.4e-18 95.5 77 68.8
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 2.4e-18 95.5 77 66.2
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 2.4e-18 95.5 84 63.1
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 3.1e-18 95.1 84 63.1
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 5.3e-18 94.4 77 67.5
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 6.9e-18 94.0 77 67.5
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 6.9e-18 94.0 79 65.8
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 9.0e-18 93.6 77 66.2
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 9.0e-18 93.6 83 65.1
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 9.0e-18 93.6 77 66.2
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 1.2e-17 93.2 77 64.9
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 1.2e-17 93.2 77 64.9
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 1.2e-17 93.2 77 64.9
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 1.5e-17 92.8 77 64.9
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 1.5e-17 92.8 79 64.6
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 2.6e-17 92.0 77 63.6
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 7.6e-17 90.5 80 61.2
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 1.0e-16 90.1 78 64.1
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 1.7e-16 89.4 72 68.1
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 2.2e-16 89.0 80 60.0
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 4.9e-16 87.8 81 64.2
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 4.9e-16 87.8 77 62.3
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 4.9e-16 87.8 78 64.1
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 4.9e-16 87.8 80 67.5
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 8.4e-16 87.0 78 61.5
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 8.4e-16 87.0 81 56.8
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 1.9e-15 85.9 79 63.3
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 1.9e-15 85.9 78 62.8
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 2.5e-15 85.5 84 58.3
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 3.2e-15 85.1 78 61.5
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 4.2e-15 84.7 78 61.5
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 4.2e-15 84.7 87 56.3
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 4.2e-15 84.7 78 61.5
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 7.1e-15 84.0 80 55.0
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 9.3e-15 83.6 81 63.0
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.2e-14 83.2 80 55.0
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 2.1e-14 82.4 88 58.0
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 2.1e-14 82.4 74 62.2
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 2.1e-14 82.4 88 59.1
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 2.1e-14 82.4 81 58.0
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.7e-14 82.0 80 52.5
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 2.7e-14 82.0 81 61.7
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 6.0e-14 80.9 68 66.2
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 6.0e-14 80.9 87 54.0
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 6.0e-14 80.9 80 51.2
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 6.0e-14 80.9 80 51.2
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 7.9e-14 80.5 80 58.8
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 7.9e-14 80.5 81 61.7
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 7.9e-14 80.5 81 61.7
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 7.9e-14 80.5 80 51.2
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 7.9e-14 80.5 80 52.5
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 7.9e-14 80.5 78 60.3
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.8e-13 79.3 80 51.2
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.0e-13 78.6 80 50.0
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.0e-13 78.6 80 50.0
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 5.1e-13 77.8 80 50.0
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 6.7e-13 77.4 78 57.7
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 1.9e-12 75.9 79 49.4
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 2.5e-12 75.5 75 60.0
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 5.7e-12 74.3 80 57.5
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 5.7e-12 74.3 80 57.5
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 1.6e-11 72.8 78 53.8
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 2.8e-11 72.0 63 58.7
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 6.3e-11 70.9 72 50.0
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 3.1e-10 68.6 65 58.5
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 4.1e-10 68.2 84 52.4
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 9.0e-10 67.0 88 47.7
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 2.0e-09 65.9 77 53.2
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 3.8e-08 61.6 94 44.7


User provided reference genes

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