Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1921 Ceratophyllum demersum HOM05D004633 ORTHO05D005503 1.3e-105 386.3 182 100.0
TAR376G0286 Trochodendron aralioides HOM05D004633 ORTHO05D005503 3.6e-60 235.3 152 73.0
Nn1g04752 Nelumbo nucifera HOM05D004633 ORTHO05D005503 4.7e-60 235.0 190 61.6
Aqoxy5G01172 Aquilegia oxysepala HOM05D004633 ORTHO05D005503 1.4e-56 223.4 156 69.2
Cc07_g06290 Coffea canephora HOM05D004633 ORTHO05D005503 1.0e-54 217.2 104 93.3
Eucgr.L01089 Eucalyptus grandis HOM05D004633 ORTHO05D005503 3.9e-54 215.3 148 71.6
GSVIVG01022068001 Vitis vinifera HOM05D004633 ORTHO05D005503 6.6e-54 214.5 169 65.1
Duzib147G0002 Durio zibethinus HOM05D004633 ORTHO05D005503 1.5e-53 213.4 149 70.5
AT5G67220 Arabidopsis thaliana HOM05D004633 ORTHO05D005503 1.9e-53 213.0 149 69.1
Ca_22131_v3 Cicer arietinum L. HOM05D004633 ORTHO05D005503 2.5e-53 212.6 131 74.8
HanXRQChr15g0490881 Helianthus annuus HOM05D004633 ORTHO05D005503 2.5e-53 212.6 158 65.2
Actinidia16468 Actinidia chinensis HOM05D004633 ORTHO05D005503 3.3e-53 212.2 104 90.4
Eucgr.H02218 Eucalyptus grandis HOM05D004633 ORTHO05D005503 4.3e-53 211.8 104 91.3
CARHR280410 Cardamine hirsuta HOM05D004633 ORTHO05D005503 5.6e-53 211.5 165 60.6
AL8G44120 Arabidopsis lyrata HOM05D004633 ORTHO05D005503 7.3e-53 211.1 148 67.6
Dinv30022 Davidia involucrata HOM05D004633 ORTHO05D005503 7.3e-53 211.1 104 90.4
Rhsim08G0098400 Rhododendron simsii HOM05D004633 ORTHO05D005503 7.3e-53 211.1 104 90.4
vmacro17967 Vaccinium macrocarpon HOM05D004633 ORTHO05D005503 7.3e-53 211.1 104 90.4
Cfa004047 Carpinus fangiana HOM05D004633 ORTHO05D005503 9.5e-53 210.7 159 65.4
FAN19G2847 Fragaria x ananassa HOM05D004633 ORTHO05D005503 9.5e-53 210.7 147 68.7
QL06p040312 Quercus lobata HOM05D004633 ORTHO05D005503 9.5e-53 210.7 147 72.8
Lsat_1_v5_gn_4_164460 Lactuca sativa HOM05D004633 ORTHO05D005503 1.2e-52 210.3 160 64.4
Lj4g0002857 Lotus japonicus HOM05D004633 ORTHO05D005503 1.2e-52 210.3 104 88.5
Sed0019372 Sechium edule HOM05D004633 ORTHO05D005503 1.2e-52 210.3 174 62.6
CiPaw.01G014400 Carya illinoinensis HOM05D004633 ORTHO05D005503 1.6e-52 209.9 132 72.7
FAN28G1894 Fragaria x ananassa HOM05D004633 ORTHO05D005503 2.1e-52 209.5 154 65.6
FAN28G2116 Fragaria x ananassa HOM05D004633 ORTHO05D005503 2.1e-52 209.5 154 65.6
Peaxi162Scf00365g00413 Petunia axillaris HOM05D004633 ORTHO05D005503 2.1e-52 209.5 104 88.5
CSS0046694 Camellia sinensis var. sinensis HOM05D004633 ORTHO05D005503 2.8e-52 209.1 104 89.4
CANSAT25G1160 Cannabis sativa HOM05D004633 ORTHO05D005503 2.8e-52 209.1 174 62.1
BcaB02g09941 Brassica carinata HOM05D004633 ORTHO05D005503 3.6e-52 208.8 152 63.8
FvH4_1g16470 Fragaria vesca HOM05D004633 ORTHO05D005503 3.6e-52 208.8 147 68.0
Prupe.6G230700 Prunus persica HOM05D004633 ORTHO05D005503 3.6e-52 208.8 114 80.7
BolC7t42968H Brassica oleracea HOM05D004633 ORTHO05D005503 4.7e-52 208.4 152 63.8
Carub.0008s2729 Capsella rubella HOM05D004633 ORTHO05D005503 4.7e-52 208.4 154 64.9
COL.COLO4_11464 Corchorus olitorius HOM05D004633 ORTHO05D005503 4.7e-52 208.4 157 67.5
Thhalv10004143m.g Eutrema salsugineum HOM05D004633 ORTHO05D005503 4.7e-52 208.4 150 67.3
FAN23G1966 Fragaria x ananassa HOM05D004633 ORTHO05D005503 4.7e-52 208.4 147 68.7
Lalb_Chr05g0226241 Lupinus albus HOM05D004633 ORTHO05D005503 4.7e-52 208.4 147 68.7
C09p11170 Brassica napus HOM05D004633 ORTHO05D005503 6.2e-52 208.0 119 76.5
RcHm_v2.0_Chr2g0106351 Rosa chinensis HOM05D004633 ORTHO05D005503 6.2e-52 208.0 152 66.4
Thecc.01G061800 Theobroma cacao HOM05D004633 ORTHO05D005503 6.2e-52 208.0 128 76.6
BraA09t36596Z Brassica rapa HOM05D004633 ORTHO05D005503 8.0e-52 207.6 119 76.5
Hma1.2p1_0017F.1_g011780 Hydrangea macrophylla HOM05D004633 ORTHO05D005503 8.0e-52 207.6 114 80.7
BcaB04g20070 Brassica carinata HOM05D004633 ORTHO05D005503 1.0e-51 207.2 131 73.3
ClCG02G008020 Citrullus lanatus HOM05D004633 ORTHO05D005503 1.0e-51 207.2 172 62.2
FAN26G1576 Fragaria x ananassa HOM05D004633 ORTHO05D005503 1.0e-51 207.2 151 66.2
Lsat_1_v5_gn_3_90261 Lactuca sativa HOM05D004633 ORTHO05D005503 1.0e-51 207.2 183 59.0
Nitab4.5_0000929g0040 Nicotiana tabacum HOM05D004633 ORTHO05D005503 1.0e-51 207.2 162 64.2
TWI73G0624 Tripterygium wilfordii HOM05D004633 ORTHO05D005503 1.0e-51 207.2 114 81.6
HPP92_012974 Vanilla planifolia HOM05D004633 ORTHO05D005503 1.0e-51 207.2 155 63.9
Atru.chr3.268 Acer truncatum HOM05D004633 ORTHO05D005503 1.4e-51 206.8 112 82.1
BcaC04g23204 Brassica carinata HOM05D004633 ORTHO05D005503 1.4e-51 206.8 150 65.3
AUR62003922 Chenopodium quinoa HOM05D004633 ORTHO05D005503 1.4e-51 206.8 104 86.5
Glyma.17G169000 Glycine max HOM05D004633 ORTHO05D005503 1.4e-51 206.8 140 69.3
MD15G1287200 Malus domestica HOM05D004633 ORTHO05D005503 1.4e-51 206.8 186 58.6
Sp2g29450 Schrenkiella parvula HOM05D004633 ORTHO05D005503 1.4e-51 206.8 148 64.2
Sopen02g037630 Solanum pennellii HOM05D004633 ORTHO05D005503 1.4e-51 206.8 160 62.5
MSTRG.3439 Avicennia marina HOM05D004633 ORTHO05D005503 1.8e-51 206.5 104 86.5
A09p09480 Brassica napus HOM05D004633 ORTHO05D005503 1.8e-51 206.5 132 70.5
Aa31LG1G15750 Aethionema arabicum HOM05D004633 ORTHO05D005503 2.3e-51 206.1 159 65.4
BolC9t54006H Brassica oleracea HOM05D004633 ORTHO05D005503 2.3e-51 206.1 150 64.7
MELO3C024784.2 Cucumis melo HOM05D004633 ORTHO05D005503 2.3e-51 206.1 173 60.7
AUR62038236 Chenopodium quinoa HOM05D004633 ORTHO05D005503 3.1e-51 205.7 104 85.6
SHI29406 Sapria himalayana HOM05D004633 ORTHO05D005503 3.1e-51 205.7 104 86.5
Sed0006372 Sechium edule HOM05D004633 ORTHO05D005503 3.1e-51 205.7 150 67.3
Haze_15364 Corylus avellana HOM05D004633 ORTHO05D005503 4.0e-51 205.3 162 63.6
Dinv26852 Davidia involucrata HOM05D004633 ORTHO05D005503 4.0e-51 205.3 104 88.5
Gohir.D03G024900 Gossypium hirsutum HOM05D004633 ORTHO05D005503 4.0e-51 205.3 155 69.7
Gorai.003G026500 Gossypium raimondii HOM05D004633 ORTHO05D005503 4.0e-51 205.3 155 69.7
Sopen03g008320 Solanum pennellii HOM05D004633 ORTHO05D005503 4.0e-51 205.3 104 86.5
PGSC0003DMG400024962 Solanum tuberosum HOM05D004633 ORTHO05D005503 4.0e-51 205.3 167 59.3
CsaV3_2G035640 Cucumis sativus L. HOM05D004633 ORTHO05D005503 5.2e-51 204.9 152 67.1
Potri.007G047300 Populus trichocarpa HOM05D004633 ORTHO05D005503 5.2e-51 204.9 104 87.5
Sabra07G0042200 Salix brachista HOM05D004633 ORTHO05D005503 5.2e-51 204.9 162 64.2
EL10Ac6g15705 Beta vulgaris HOM05D004633 ORTHO05D005503 6.8e-51 204.5 104 86.5
Ciclev10025630m.g Citrus clementina HOM05D004633 ORTHO05D005503 6.8e-51 204.5 104 86.5
ATR0001G042 Amborella trichopoda HOM05D004633 ORTHO05D005503 8.9e-51 204.1 151 66.9
Manes.12G107300 Manihot esculenta HOM05D004633 ORTHO05D005503 8.9e-51 204.1 158 63.9
Manes.13G119720 Manihot esculenta HOM05D004633 ORTHO05D005503 8.9e-51 204.1 104 86.5
SGA_v2.0_scaffold10G05122 Striga asiatica HOM05D004633 ORTHO05D005503 8.9e-51 204.1 164 64.6
Solyc03g044270.3 Solanum lycopersicum HOM05D004633 ORTHO05D005503 1.5e-50 203.4 104 85.6
VMungo0251G3622 Vigna mungo HOM05D004633 ORTHO05D005503 1.5e-50 203.4 104 84.6
PGR102G1926 Punica granatum HOM05D004633 ORTHO05D005503 2.0e-50 203.0 104 86.5
THA.LOC104821245 Tarenaya hassleriana HOM05D004633 ORTHO05D005503 2.0e-50 203.0 145 69.7
Migut.L00177 Erythranthe guttata HOM05D004633 ORTHO05D005503 2.6e-50 202.6 104 85.6
Glyma.05G096300 Glycine max HOM05D004633 ORTHO05D005503 2.6e-50 202.6 104 84.6
Solyc02g093060.3 Solanum lycopersicum HOM05D004633 ORTHO05D005503 2.6e-50 202.6 153 63.4
Gohir.A02G155700 Gossypium hirsutum HOM05D004633 ORTHO05D005503 3.4e-50 202.2 155 69.0
Phvul.003G241100 Phaseolus vulgaris HOM05D004633 ORTHO05D005503 3.4e-50 202.2 104 84.6
Psat4g085040 Pisum sativum HOM05D004633 ORTHO05D005503 3.4e-50 202.2 103 85.4
THA.LOC104819242 Tarenaya hassleriana HOM05D004633 ORTHO05D005503 3.4e-50 202.2 145 67.6
TPR.G14594 Trifolium pratense HOM05D004633 ORTHO05D005503 4.4e-50 201.8 103 85.4
HanXRQChr11g0328291 Helianthus annuus HOM05D004633 ORTHO05D005503 5.8e-50 201.4 144 66.7
arahy.Tifrunner.gnm1.ann1.H6KR5I Arachis hypogaea HOM05D004633 ORTHO05D005503 7.5e-50 201.1 164 63.4
arahy.Tifrunner.gnm1.ann1.ZUJJ2F Arachis hypogaea HOM05D004633 ORTHO05D005503 7.5e-50 201.1 174 60.9
A07p16750 Brassica napus HOM05D004633 ORTHO05D005503 7.5e-50 201.1 153 63.4
BraA07t29400Z Brassica rapa HOM05D004633 ORTHO05D005503 7.5e-50 201.1 153 63.4
Hund13907 Selenicereus undatus HOM05D004633 ORTHO05D005503 7.5e-50 201.1 104 84.6
C07p24480 Brassica napus HOM05D004633 ORTHO05D005503 9.8e-50 200.7 152 63.2
Zm00001eb227810 Zea mays HOM05D004633 ORTHO05D005503 9.8e-50 200.7 104 82.7
CAN.G370.28 Capsicum annuum HOM05D004633 ORTHO05D005503 1.3e-49 200.3 104 83.7
Actinidia03804 Actinidia chinensis HOM05D004633 ORTHO05D005503 1.7e-49 199.9 170 61.8
Medtr4g094905 Medicago truncatula HOM05D004633 ORTHO05D005503 1.7e-49 199.9 104 84.6
Os06g0712900 Oryza sativa ssp. japonica HOM05D004633 ORTHO05D005503 1.7e-49 199.9 145 63.4
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 2.2e-49 199.5 104 81.7
BcaC06g34804 Brassica carinata HOM05D004633 ORTHO05D005503 1.1e-48 197.2 152 62.5
ECA246G0986 Erigeron canadensis HOM05D004633 ORTHO05D005503 1.4e-48 196.8 145 64.1
Peaxi162Scf00549g00221 Petunia axillaris HOM05D004633 ORTHO05D005503 3.2e-48 195.7 104 80.8
Cpa.g.sc55.107 Carica papaya HOM05D004633 ORTHO05D005503 4.1e-48 195.3 101 84.2
PGSC0003DMG400006483 Solanum tuberosum HOM05D004633 ORTHO05D005503 4.1e-48 195.3 101 85.1
HanXRQChr11g0348441 Helianthus annuus HOM05D004633 ORTHO05D005503 5.0e-46 188.3 141 65.2
SEGI_29602 Sequoiadendron giganteum HOM05D004633 ORTHO05D005503 5.0e-46 188.3 160 57.5
SEGI_00124 Sequoiadendron giganteum HOM05D004633 ORTHO05D005503 1.9e-45 186.4 104 77.9
ECA246G1233 Erigeron canadensis HOM05D004633 ORTHO05D005503 4.3e-45 185.3 102 79.4
HanXRQChr15g0473611 Helianthus annuus HOM05D004633 ORTHO05D005503 9.5e-45 184.1 104 77.9
SMO169G0138 Selaginella moellendorffii HOM05D004633 ORTHO05D005503 1.1e-43 180.6 104 71.2
Pp3c3_25920 Physcomitrium patens HOM05D004633 ORTHO05D005503 2.9e-41 172.6 103 71.8
Mapoly0125s0018 Marchantia polymorpha HOM05D004633 ORTHO05D005503 3.2e-40 169.1 102 74.5
Mapoly0048s0005 Marchantia polymorpha HOM05D004633 ORTHO05D005503 2.3e-38 162.9 102 68.6
Pp3c13_19950 Physcomitrium patens HOM05D004633 ORTHO05D005503 2.3e-38 162.9 104 70.2
SalBow5G0679 Salvia bowleyana HOM05D004633 ORTHO05D005503 1.5e-37 160.2 172 50.0
Sc03g0001790 Simmondsia chinensis HOM05D004633 ORTHO05D005503 2.9e-33 146.0 75 84.0
MCO16G071 Micromonas commoda HOM05D004633 ORTHO05D005503 3.8e-33 145.6 131 54.2
Cre12.g486900 Chlamydomonas reinhardtii HOM05D004633 ORTHO05D005503 7.1e-32 141.4 97 67.0
ECA232G1704 Erigeron canadensis HOM05D004633 ORTHO05D005503 7.1e-32 141.4 72 87.5
Pp3c8_25410 Physcomitrium patens HOM05D004633 ORTHO05D005503 5.6e-29 131.7 147 47.6
DCAR_010863 Daucus carota HOM05D004633 ORTHO05D005503 3.1e-27 125.9 65 86.2
Lj7A74G30 Lonicera japonica HOM05D004633 ORTHO05D005503 1.5e-26 123.6 109 57.8
QL10p045366 Quercus lobata HOM05D004633 ORTHO05D005503 4.4e-26 122.1 64 84.4
CAN.G82.14 Capsicum annuum HOM05D004633 ORTHO05D005503 5.8e-26 121.7 65 80.0
Nn5g30384 Nelumbo nucifera HOM05D004633 ORTHO05D005503 5.4e-24 115.2 120 52.5
Nitab4.5_0003962g0040 Nicotiana tabacum HOM05D004633 ORTHO05D005503 4.3e-21 105.5 104 51.0
Nitab4.5_0007370g0010 Nicotiana tabacum HOM05D004633 ORTHO05D005503 7.3e-21 104.8 157 42.7
CBR_g36684 Chara braunii HOM05D004633 ORTHO05D005503 6.2e-20 101.7 62 74.2
Haze_26560 Corylus avellana HOM05D004633 ORTHO05D005503 1.8e-19 100.1 85 52.9
MD02G1177400 Malus domestica HOM05D004633 ORTHO05D005503 6.9e-19 98.2 149 38.9
Cfa023304 Carpinus fangiana HOM05D004633 ORTHO05D005503 2.2e-17 93.2 133 38.3
QL05p004270 Quercus lobata HOM05D004633 ORTHO05D005503 1.2e-15 87.4 44 88.6
QL03p029185 Quercus lobata HOM05D004633 ORTHO05D005503 1.6e-15 87.0 44 88.6
QL04p014325 Quercus lobata HOM05D004633 ORTHO05D005503 1.6e-15 87.0 44 88.6
QL11p046130 Quercus lobata HOM05D004633 ORTHO05D005503 1.6e-15 87.0 44 88.6
DCAR_010864 Daucus carota HOM05D004633 ORTHO05D005503 1.9e-13 80.1 39 84.6
CDE01G0097 Ceratophyllum demersum HOM05D001708 ORTHO05D001649 1.3e-12 77.4 36 97.2
TAR628G1022 Trochodendron aralioides HOM05D004633 ORTHO05D005503 4.5e-10 68.9 43 74.4
QL10p012961 Quercus lobata HOM05D004633 ORTHO05D005503 5.8e-10 68.6 36 86.1


User provided reference genes

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