Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1919 Ceratophyllum demersum HOM05D006405 ORTHO05D007943 4.2e-43 177.6 85 100.0
CDE01G0658 Ceratophyllum demersum HOM05D006405 ORTHO05D007943 8.4e-20 100.1 202 36.1
Dinv41556 Davidia involucrata HOM05D006405 ORTHO05D007943 2.7e-10 68.6 41 75.6
ATR0083G066 Amborella trichopoda HOM05D006405 ORTHO05D007943 6.1e-10 67.4 41 75.6
PSO170G5697 Papaver somniferum HOM05D006405 ORTHO05D007943 6.1e-10 67.4 41 70.7
Nn2g11875 Nelumbo nucifera HOM05D006405 ORTHO05D007943 1.4e-09 66.2 41 73.2
HPP92_008701 Vanilla planifolia HOM05D006405 ORTHO05D007943 1.4e-09 66.2 45 64.4
Aqoxy7G01949 Aquilegia oxysepala HOM05D006405 ORTHO05D007943 1.8e-09 65.9 44 68.2
MSTRG.10623 Avicennia marina HOM05D006405 ORTHO05D007943 1.8e-09 65.9 41 73.2
TAR636G3075 Trochodendron aralioides HOM05D006405 ORTHO05D007943 3.0e-09 65.1 45 66.7
Dinv36586 Davidia involucrata HOM05D006405 ORTHO05D007943 3.9e-09 64.7 41 73.2
Nn8g39326 Nelumbo nucifera HOM05D006405 ORTHO05D007943 3.9e-09 64.7 41 70.7
Actinidia09391 Actinidia chinensis HOM05D006405 ORTHO05D007943 5.1e-09 64.3 41 65.9
vmacro23165 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 5.1e-09 64.3 41 65.9
vmacro23455 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 5.1e-09 64.3 41 65.9
Hma1.2p1_0018F.1_g012980 Hydrangea macrophylla HOM05D006405 ORTHO05D007943 8.8e-09 63.5 41 65.9
Nitab4.5_0000432g0020 Nicotiana tabacum HOM05D006405 ORTHO05D007943 8.8e-09 63.5 41 68.3
Cc06_g09130 Coffea canephora HOM05D006405 ORTHO05D007943 1.1e-08 63.2 41 70.7
SEGI_03053 Sequoiadendron giganteum HOM05D006405 ORTHO05D007943 1.1e-08 63.2 41 63.4
GSVIVG01015463001 Vitis vinifera HOM05D006405 ORTHO05D007943 1.5e-08 62.8 41 68.3
CiPaw.03G237400 Carya illinoinensis HOM05D006405 ORTHO05D007943 1.9e-08 62.4 41 65.9
Ca_21716_v3 Cicer arietinum L. HOM05D006405 ORTHO05D007943 1.9e-08 62.4 83 41.0
MBI04_g43150_MAGBIO Magnolia biondii HOM05D006405 ORTHO05D007943 1.9e-08 62.4 66 51.5
MBI04_g46125_MAGBIO Magnolia biondii HOM05D006405 ORTHO05D007943 1.9e-08 62.4 66 51.5
Actinidia26418 Actinidia chinensis HOM05D000063 ORTHO05D001671 2.5e-08 62.0 41 68.3
Migut.K00484 Erythranthe guttata HOM05D006405 ORTHO05D007943 2.5e-08 62.0 92 43.5
CSS0000400 Camellia sinensis var. sinensis HOM05D006405 ORTHO05D007943 3.3e-08 61.6 41 65.9
CSS0009020 Camellia sinensis var. sinensis HOM05D006405 ORTHO05D007943 3.3e-08 61.6 41 65.9
AUR62011052 Chenopodium quinoa HOM05D006405 ORTHO05D007943 3.3e-08 61.6 41 65.9
Glyma.17G119500 Glycine max HOM05D006405 ORTHO05D007943 3.3e-08 61.6 41 63.4
Lj4g0015100 Lotus japonicus HOM05D006405 ORTHO05D007943 3.3e-08 61.6 41 63.4
Hund09164 Selenicereus undatus HOM05D006405 ORTHO05D007943 3.3e-08 61.6 41 68.3
Gohir.A05G020600 Gossypium hirsutum HOM05D006405 ORTHO05D007943 4.3e-08 61.2 41 65.9
Gohir.D05G021700 Gossypium hirsutum HOM05D006405 ORTHO05D007943 4.3e-08 61.2 41 65.9
Gorai.009G022000 Gossypium raimondii HOM05D006405 ORTHO05D007943 4.3e-08 61.2 41 65.9
Nitab4.5_0001719g0050 Nicotiana tabacum HOM05D006405 ORTHO05D007943 4.3e-08 61.2 41 65.9
Psat4g042200 Pisum sativum HOM05D006405 ORTHO05D007943 4.3e-08 61.2 41 63.4
arahy.Tifrunner.gnm1.ann1.1782J0 Arachis hypogaea HOM05D006405 ORTHO05D007943 5.7e-08 60.8 41 61.0
MELO3C004534.2 Cucumis melo HOM05D006405 ORTHO05D007943 5.7e-08 60.8 41 68.3
CsaV3_2G002560 Cucumis sativus L. HOM05D006405 ORTHO05D007943 5.7e-08 60.8 41 68.3
Glyma.05G011400 Glycine max HOM05D006405 ORTHO05D007943 5.7e-08 60.8 41 63.4
Medtr4g113150 Medicago truncatula HOM05D006405 ORTHO05D007943 5.7e-08 60.8 41 63.4
Phvul.003G159900 Phaseolus vulgaris HOM05D006405 ORTHO05D007943 5.7e-08 60.8 41 63.4
Prupe.7G236000 Prunus persica HOM05D006405 ORTHO05D007943 5.7e-08 60.8 41 65.9
TPR.G26771 Trifolium pratense HOM05D006405 ORTHO05D007943 5.7e-08 60.8 41 63.4
VMungo1215G0522 Vigna mungo HOM05D006405 ORTHO05D007943 7.4e-08 60.5 41 63.4
EL10Ac8g18573 Beta vulgaris HOM05D006405 ORTHO05D007943 9.7e-08 60.1 41 63.4
Manes.14G127600 Manihot esculenta HOM05D006405 ORTHO05D007943 9.7e-08 60.1 40 67.5
AUR62033428 Chenopodium quinoa HOM05D006405 ORTHO05D007943 1.3e-07 59.7 44 61.4
Sc08g0006960 Simmondsia chinensis HOM05D006405 ORTHO05D007943 1.3e-07 59.7 41 63.4
Lsat_1_v5_gn_7_42660 Lactuca sativa HOM05D006405 ORTHO05D007943 1.7e-07 59.3 41 61.0
Potri.018G074100 Populus trichocarpa HOM05D006405 ORTHO05D007943 2.8e-07 58.5 41 61.0
QL02p086599 Quercus lobata HOM05D006405 ORTHO05D007943 2.8e-07 58.5 41 63.4
TWI32G1134 Tripterygium wilfordii HOM05D006405 ORTHO05D007943 2.8e-07 58.5 41 63.4
Ciclev10008764m.g Citrus clementina HOM05D006405 ORTHO05D007943 3.7e-07 58.2 40 62.5
Lalb_Chr23g0275181 Lupinus albus HOM05D006405 ORTHO05D007943 3.7e-07 58.2 99 34.3
SGA_v2.0_scaffold17G08036 Striga asiatica HOM05D006405 ORTHO05D007943 3.7e-07 58.2 98 34.7
HanXRQChr03g0062171 Helianthus annuus HOM05D006405 ORTHO05D007943 4.8e-07 57.8 41 58.5
DCAR_017855 Daucus carota HOM05D006405 ORTHO05D007943 6.3e-07 57.4 41 63.4
Peaxi162Scf00361g00115 Petunia axillaris HOM05D006405 ORTHO05D007943 6.3e-07 57.4 32 78.1
RcHm_v2.0_Chr2g0089591 Rosa chinensis HOM05D006405 ORTHO05D007943 6.3e-07 57.4 41 63.4
Thecc.09G118300 Theobroma cacao HOM05D006405 ORTHO05D007943 6.3e-07 57.4 72 44.4
Duzib150G0454 Durio zibethinus HOM05D006405 ORTHO05D007943 8.2e-07 57.0 75 42.7
ECA240G0175 Erigeron canadensis HOM05D006405 ORTHO05D007943 8.2e-07 57.0 41 56.1
Eucgr.L02381 Eucalyptus grandis HOM05D006405 ORTHO05D007943 8.2e-07 57.0 41 61.0
MELO3C030806.2 Cucumis melo HOM05D006405 ORTHO05D007943 1.1e-06 56.6 41 58.5
arahy.Tifrunner.gnm1.ann1.K7UYF7 Arachis hypogaea HOM05D006405 ORTHO05D007943 1.4e-06 56.2 41 58.5
Atru.chr7.1266 Acer truncatum HOM05D006405 ORTHO05D007943 1.8e-06 55.8 83 39.8
Cfa012812 Carpinus fangiana HOM05D006405 ORTHO05D007943 1.8e-06 55.8 39 66.7
Haze_25659 Corylus avellana HOM05D006405 ORTHO05D007943 1.8e-06 55.8 39 66.7
FAN23G2044 Fragaria x ananassa HOM05D006405 ORTHO05D007943 1.8e-06 55.8 41 61.0
FAN19G2606 Fragaria x ananassa HOM05D006405 ORTHO05D007943 2.4e-06 55.5 41 61.0
FAN26G0760 Fragaria x ananassa HOM05D006405 ORTHO05D007943 2.4e-06 55.5 41 61.0
FAN28G1406 Fragaria x ananassa HOM05D006405 ORTHO05D007943 2.4e-06 55.5 41 61.0
MD02G1039700 Malus domestica HOM05D006405 ORTHO05D007943 2.4e-06 55.5 41 63.4
PGR142G3933 Punica granatum HOM05D006405 ORTHO05D007943 2.4e-06 55.5 40 62.5
MD15G1180600 Malus domestica HOM05D006405 ORTHO05D007943 3.1e-06 55.1 41 63.4
vmacro20684 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 4.1e-06 54.7 35 60.0
Rhsim01G0089400 Rhododendron simsii HOM05D006405 ORTHO05D007943 5.3e-06 54.3 32 68.8
Sabra18G0062700 Salix brachista HOM05D006405 ORTHO05D007943 5.3e-06 54.3 41 58.5
Zm00001eb240430 Zea mays HOM05D006405 ORTHO05D007943 5.3e-06 54.3 44 56.8
Zm00001eb205490 Zea mays HOM05D006405 ORTHO05D007943 6.9e-06 53.9 44 54.5
ClCG11G002710 Citrullus lanatus HOM05D006405 ORTHO05D007943 9.1e-06 53.5 48 58.3


User provided reference genes

Program Settings