Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 4.8e-194 681.0 349 100.0
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 3.0e-132 475.7 254 94.1
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 3.0e-111 406.0 394 59.1
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 1.3e-103 380.6 400 55.5
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.2e-101 374.0 328 61.3
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 2.1e-101 373.2 318 62.3
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 4.7e-101 372.1 286 65.0
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 2.3e-100 369.8 391 52.9
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 4.0e-100 369.0 395 53.4
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 4.0e-100 369.0 316 61.7
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 5.2e-100 368.6 390 53.3
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 5.2e-100 368.6 286 64.7
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 1.2e-99 367.5 390 53.6
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 3.4e-99 365.9 316 60.8
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 5.8e-99 365.2 325 59.7
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 1.3e-98 364.0 321 60.4
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 3.7e-98 362.5 357 56.0
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 4.9e-98 362.1 325 59.4
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 4.9e-98 362.1 389 51.9
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 4.9e-98 362.1 391 50.9
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 8.3e-98 361.3 336 59.2
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 1.1e-97 360.9 389 52.7
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 2.4e-97 359.8 325 58.8
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 3.2e-97 359.4 321 59.5
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 5.4e-97 358.6 321 58.3
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 9.2e-97 357.8 321 57.9
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 1.6e-96 357.1 325 59.7
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 2.1e-96 356.7 389 51.9
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 2.7e-96 356.3 314 60.8
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 3.5e-96 355.9 321 57.6
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 4.6e-96 355.5 350 56.3
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 6.0e-96 355.1 368 54.3
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 1.3e-95 354.0 325 58.8
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 1.3e-95 354.0 360 55.3
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 1.7e-95 353.6 357 56.3
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 3.9e-95 352.4 320 57.2
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 6.6e-95 351.7 325 56.9
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 6.6e-95 351.7 325 58.5
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 1.1e-94 350.9 325 59.4
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 1.1e-94 350.9 321 59.2
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 1.9e-94 350.1 317 60.3
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 2.5e-94 349.7 316 59.2
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 4.3e-94 349.0 324 58.3
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 4.3e-94 349.0 324 59.6
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 1.2e-93 347.4 325 58.8
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 1.2e-93 347.4 334 58.1
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 2.1e-93 346.7 324 58.6
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 2.8e-93 346.3 394 50.3
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 3.6e-93 345.9 422 48.6
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 3.6e-93 345.9 319 58.6
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 4.7e-93 345.5 325 57.2
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 6.2e-93 345.1 327 56.9
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 1.1e-92 344.4 385 50.6
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 2.3e-92 343.2 384 51.0
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 3.1e-92 342.8 383 51.2
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 5.2e-92 342.0 347 54.8
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 1.2e-91 340.9 324 56.8
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 2.0e-91 340.1 319 57.1
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 2.6e-91 339.7 324 55.9
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 2.6e-91 339.7 315 58.7
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 3.4e-91 339.3 322 56.5
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 4.4e-91 339.0 322 56.2
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 4.4e-91 339.0 332 53.9
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 7.6e-91 338.2 322 56.2
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 7.6e-91 338.2 391 49.1
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 9.9e-91 337.8 381 52.0
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 9.9e-91 337.8 381 52.0
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 1.3e-90 337.4 310 58.1
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 4.9e-90 335.5 321 57.6
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 6.4e-90 335.1 386 49.0
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 1.1e-89 334.3 322 55.9
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 1.1e-89 334.3 322 56.2
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 1.4e-89 334.0 327 53.8
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 3.2e-89 332.8 293 60.4
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 5.4e-89 332.0 357 52.1
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 1.2e-88 330.9 325 56.0
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 1.2e-88 330.9 320 56.6
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 2.7e-88 329.7 346 54.6
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 3.9e-87 325.9 322 55.3
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 6.6e-87 325.1 320 54.1
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 8.6e-87 324.7 322 55.0
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 8.6e-87 324.7 320 54.1
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 1.9e-86 323.6 319 55.5
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 7.3e-86 321.6 320 53.4
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 2.8e-85 319.7 339 53.4
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 4.7e-85 318.9 285 60.7
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 1.1e-84 317.8 343 51.0
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 1.2e-83 314.3 382 47.9
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 3.4e-83 312.8 219 70.8
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 4.4e-83 312.4 226 71.2
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 5.4e-81 305.4 274 59.1
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 1.6e-80 303.9 302 53.6
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 2.5e-78 296.6 236 66.1
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 1.6e-69 267.3 304 47.7
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 3.1e-68 263.1 307 46.6
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 2.0e-67 260.4 302 46.4
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 5.8e-67 258.8 262 54.2
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 1.3e-66 257.7 309 45.0
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 8.4e-66 255.0 232 59.9
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 3.9e-63 246.1 275 51.3
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 3.9e-63 246.1 235 55.3
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 5.1e-63 245.7 285 48.4
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 4.3e-62 242.7 219 58.0
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.8e-60 237.3 307 42.7
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 6.0e-56 222.2 200 59.5
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 1.8e-55 220.7 160 68.1
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 1.5e-54 217.6 253 51.8
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 3.7e-53 213.0 202 58.4
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 2.6e-51 206.8 232 54.7
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 9.7e-46 188.3 144 67.4
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 1.3e-45 188.0 164 59.1
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 1.8e-39 167.5 296 35.5
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 2.3e-39 167.2 140 62.9
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 1.2e-35 154.8 249 34.1
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 5.5e-33 146.0 280 38.9
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 4.7e-32 142.9 200 39.0
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 1.2e-27 128.3 226 40.3
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 2.6e-27 127.1 123 54.5
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.8e-23 114.4 82 73.2
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 8.2e-21 105.5 82 68.3
Psat2g070960 Pisum sativum HOM05D006658 ORTHO05D008515 3.2e-17 93.6 220 35.0
HPP92_001340 Vanilla planifolia HOM05D006658 ORTHO05D008515 2.1e-16 90.9 64 65.6
HanXRQChr09g0256171 Helianthus annuus HOM05D006658 ORTHO05D008515 2.8e-13 80.5 62 59.7
Oeu037664.1 Olea europaea HOM05D006658 ORTHO05D008515 1.2e-11 75.1 74 52.7
HanXRQChr04g0123631 Helianthus annuus HOM05D034347 ORTHO05D227534 6.8e-07 59.3 46 60.9


User provided reference genes

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