Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 7.0e-101 370.5 177 100.0
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 4.0e-88 328.2 165 93.3
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 4.6e-52 208.4 130 70.0
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 3.9e-51 205.3 144 62.5
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 2.5e-50 202.6 130 70.8
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 3.3e-50 202.2 137 62.8
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 4.3e-50 201.8 168 56.0
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 7.3e-50 201.1 157 58.0
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 9.6e-50 200.7 143 64.3
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 2.8e-49 199.1 136 63.2
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 2.8e-49 199.1 135 64.4
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 2.8e-49 199.1 143 64.3
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 3.6e-49 198.7 141 67.4
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 8.1e-49 197.6 141 61.0
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 8.1e-49 197.6 129 69.0
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 8.1e-49 197.6 139 62.6
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.4e-48 196.8 152 57.2
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 1.8e-48 196.4 168 56.5
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 2.4e-48 196.1 167 57.5
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 4.0e-48 195.3 135 64.4
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 4.0e-48 195.3 130 67.7
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 5.2e-48 194.9 141 59.6
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 5.2e-48 194.9 128 65.6
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 5.2e-48 194.9 141 61.0
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 5.2e-48 194.9 129 65.1
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 6.8e-48 194.5 136 63.2
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 6.8e-48 194.5 144 63.9
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 8.9e-48 194.1 141 59.6
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 8.9e-48 194.1 133 62.4
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 1.2e-47 193.7 141 58.9
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.2e-47 193.7 137 61.3
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 1.2e-47 193.7 129 65.1
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 1.5e-47 193.4 139 67.6
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 2.0e-47 193.0 134 61.2
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 2.0e-47 193.0 140 62.1
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 2.6e-47 192.6 128 64.8
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 2.6e-47 192.6 136 61.8
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.6e-47 192.6 135 63.7
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 2.6e-47 192.6 136 64.7
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 3.4e-47 192.2 138 61.6
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 4.4e-47 191.8 134 63.4
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 4.4e-47 191.8 139 63.3
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 5.8e-47 191.4 124 68.5
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 5.8e-47 191.4 132 65.9
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 7.6e-47 191.0 137 64.2
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 9.9e-47 190.7 141 58.9
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 1.3e-46 190.3 134 60.4
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.2e-46 189.5 135 63.0
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 2.2e-46 189.5 123 66.7
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 2.9e-46 189.1 149 57.7
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 3.8e-46 188.7 141 58.9
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 4.9e-46 188.3 137 59.9
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 6.4e-46 188.0 128 63.3
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 1.1e-45 187.2 135 60.0
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 1.1e-45 187.2 135 60.0
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 2.4e-45 186.0 167 54.5
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 4.2e-45 185.3 138 61.6
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 4.2e-45 185.3 135 61.5
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 4.2e-45 185.3 135 61.5
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 5.4e-45 184.9 142 58.5
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 9.3e-45 184.1 129 62.8
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.2e-44 183.7 129 62.8
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 1.6e-44 183.3 137 60.6
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 2.1e-44 183.0 165 52.7
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 2.7e-44 182.6 134 61.2
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 2.7e-44 182.6 163 55.8
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 3.5e-44 182.2 121 64.5
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 4.6e-44 181.8 123 63.4
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 1.0e-43 180.6 129 64.3
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 3.0e-43 179.1 121 66.1
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 5.1e-43 178.3 152 55.9
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 6.6e-43 177.9 127 63.8
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 8.7e-43 177.6 184 52.2
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 1.1e-42 177.2 98 75.5
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.9e-42 176.4 98 74.5
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.9e-42 176.4 114 68.4
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 4.3e-42 175.3 98 73.5
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 5.6e-42 174.9 127 62.2
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 2.1e-41 172.9 128 63.3
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 4.8e-41 171.8 156 51.9
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 6.2e-41 171.4 168 48.8
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 8.1e-41 171.0 99 72.7
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 1.1e-40 170.6 183 45.9
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.8e-40 169.9 154 54.5
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 1.8e-40 169.9 98 71.4
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.3e-38 163.7 122 58.2
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 6.4e-38 161.4 116 61.2
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 8.4e-38 161.0 99 67.7
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.3e-35 153.7 95 69.5
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 1.7e-35 153.3 91 72.5
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 4.8e-33 145.2 98 64.3
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 1.1e-32 144.1 111 58.6
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 2.6e-31 139.4 94 62.8
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 8.4e-30 134.4 133 51.1
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 2.4e-29 132.9 107 57.9
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 4.2e-29 132.1 142 54.2
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 1.8e-27 126.7 103 53.4
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 3.7e-25 119.0 89 56.2
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 9.0e-24 114.4 89 52.8
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 1.2e-23 114.0 120 45.8
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 2.0e-23 113.2 128 46.9
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 2.7e-20 102.8 56 76.8
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 4.6e-20 102.1 60 73.3
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 1.3e-19 100.5 106 47.2
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 1.3e-17 94.0 95 46.3
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 1.8e-11 73.6 65 52.3
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 6.5e-06 55.1 42 57.1


User provided reference genes

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