Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 2.4e-90 335.9 224 100.0
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 3.6e-78 295.4 216 93.5
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 7.6e-44 181.4 217 63.6
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 3.8e-43 179.1 217 63.6
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 1.1e-42 177.6 216 65.3
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 1.4e-42 177.2 218 61.5
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 1.4e-42 177.2 217 65.4
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 2.4e-42 176.4 217 56.2
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 3.2e-42 176.0 218 62.4
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 5.4e-42 175.3 222 65.3
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 7.1e-42 174.9 218 64.2
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 7.1e-42 174.9 218 63.3
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 1.2e-41 174.1 221 65.2
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 2.1e-41 173.3 220 63.6
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 2.7e-41 172.9 230 62.2
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 6.0e-41 171.8 220 61.8
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 1.0e-40 171.0 220 61.4
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 1.0e-40 171.0 219 66.2
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 1.0e-40 171.0 219 65.8
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 1.0e-40 171.0 219 66.2
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 1.0e-40 171.0 216 65.3
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 1.3e-40 170.6 217 61.8
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 1.7e-40 170.2 218 61.5
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 2.3e-40 169.9 217 63.1
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 2.3e-40 169.9 219 66.7
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 2.3e-40 169.9 221 61.5
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 3.0e-40 169.5 215 61.9
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 3.9e-40 169.1 219 65.8
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 6.6e-40 168.3 216 61.6
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 8.7e-40 167.9 218 64.7
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 1.1e-39 167.5 222 63.1
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 1.9e-39 166.8 216 62.0
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 1.9e-39 166.8 223 62.8
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 1.9e-39 166.8 221 64.3
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 2.5e-39 166.4 216 62.0
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 3.3e-39 166.0 216 64.4
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 4.3e-39 165.6 219 65.3
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 4.3e-39 165.6 220 60.0
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 5.6e-39 165.2 217 59.9
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 5.6e-39 165.2 217 59.0
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 7.4e-39 164.9 217 59.0
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 7.4e-39 164.9 217 61.3
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 9.6e-39 164.5 219 66.2
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 2.1e-38 163.3 216 61.6
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 3.6e-38 162.5 219 67.1
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 3.6e-38 162.5 219 65.8
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 4.8e-38 162.2 217 65.0
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 4.8e-38 162.2 219 59.8
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 6.2e-38 161.8 152 80.9
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 8.1e-38 161.4 219 64.8
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 1.1e-37 161.0 218 56.9
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 1.4e-37 160.6 219 64.8
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 1.8e-37 160.2 225 58.7
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 2.4e-37 159.8 218 59.6
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 2.4e-37 159.8 218 61.5
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 4.0e-37 159.1 213 64.8
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 1.2e-36 157.5 219 64.8
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.2e-36 157.5 215 65.6
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 1.2e-36 157.5 224 64.3
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 2.0e-36 156.8 219 62.1
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 2.6e-36 156.4 230 59.6
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 2.6e-36 156.4 221 60.2
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 3.4e-36 156.0 215 62.8
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 5.8e-36 155.2 147 76.2
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 1.7e-35 153.7 215 62.3
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 4.9e-35 152.1 216 63.4
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 8.4e-35 151.4 229 57.2
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 1.1e-34 151.0 162 78.4
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 1.4e-34 150.6 222 59.9
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 1.9e-34 150.2 223 58.7
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 1.9e-34 150.2 223 59.2
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 5.5e-34 148.7 141 60.3
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 1.2e-33 147.5 161 55.3
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 1.2e-33 147.5 223 58.7
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 2.7e-33 146.4 165 67.9
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 1.0e-32 144.4 166 55.4
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 1.3e-32 144.1 223 58.3
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 8.7e-32 141.4 224 59.8
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 1.5e-31 140.6 211 58.8
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 4.3e-31 139.0 223 54.3
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 1.6e-30 137.1 216 45.4
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 1.6e-30 137.1 172 54.1
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 2.8e-30 136.3 222 59.0
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 1.0e-27 127.9 157 68.8
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 1.3e-27 127.5 122 69.7
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 1.7e-27 127.1 219 51.1
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 3.8e-27 125.9 218 56.0
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 3.8e-27 125.9 84 79.8
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.1e-26 124.4 122 83.6
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 3.2e-26 122.9 95 69.5
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 9.3e-26 121.3 164 50.6
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 5.1e-24 115.5 198 59.6
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 3.4e-20 102.8 74 74.3
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 1.0e-19 101.3 85 63.5
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 6.5e-19 98.6 163 43.6
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 1.1e-18 97.8 165 50.3
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 1.9e-18 97.1 108 53.7
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 4.2e-18 95.9 103 85.4
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 9.3e-18 94.7 98 58.2
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 2.1e-17 93.6 103 77.7
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 2.1e-17 93.6 103 68.9
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.1e-17 93.6 125 47.2
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 6.1e-17 92.0 103 72.8
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 7.9e-17 91.7 113 49.6
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 1.3e-16 90.9 125 47.2
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 5.7e-15 85.5 160 33.8
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 2.2e-14 83.6 60 70.0
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 1.8e-13 80.5 85 47.1
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 4.1e-13 79.3 95 50.5
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 3.2e-10 69.7 69 58.0
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 1.7e-06 57.4 97 45.4


User provided reference genes

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