Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1866 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 1.0e-92 343.6 193 100.0
Nn4g23335 Nelumbo nucifera HOM05D003853 ORTHO05D004171 2.0e-24 116.7 123 66.7
Hma1.2p1_0354F.1_g133590 Hydrangea macrophylla HOM05D003853 ORTHO05D004171 6.0e-21 105.1 130 62.3
CiPaw.05G127700 Carya illinoinensis HOM05D003853 ORTHO05D004171 7.8e-21 104.8 134 44.8
Manes.01G030100 Manihot esculenta HOM05D003853 ORTHO05D004171 1.0e-20 104.4 124 61.3
Gohir.A03G103000 Gossypium hirsutum HOM05D003853 ORTHO05D004171 2.3e-20 103.2 122 48.4
Gohir.D02G128200 Gossypium hirsutum HOM05D003853 ORTHO05D004171 8.6e-20 101.3 116 49.1
Nitab4.5_0000014g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 1.5e-19 100.5 117 49.6
Gorai.005G143900 Gossypium raimondii HOM05D003853 ORTHO05D004171 2.5e-19 99.8 116 48.3
Haze_11978 Corylus avellana HOM05D003853 ORTHO05D004171 3.3e-19 99.4 135 52.6
Thecc.02G335500 Theobroma cacao HOM05D003853 ORTHO05D004171 9.5e-19 97.8 128 46.9
Cfa008902 Carpinus fangiana HOM05D003853 ORTHO05D004171 1.6e-18 97.1 135 45.9
Sopen04g001500 Solanum pennellii HOM05D003853 ORTHO05D004171 2.8e-18 96.3 119 46.2
Solyc04g005480.1 Solanum lycopersicum HOM05D003853 ORTHO05D004171 3.6e-18 95.9 118 46.6
Nitab4.5_0002806g0050 Nicotiana tabacum HOM05D003853 ORTHO05D004171 4.7e-18 95.5 139 51.8
TAR622G0811 Trochodendron aralioides HOM05D003853 ORTHO05D004171 4.7e-18 95.5 128 48.4
Duzib251G0928 Durio zibethinus HOM05D003853 ORTHO05D004171 6.2e-18 95.1 128 54.7
Dinv16707 Davidia involucrata HOM05D003853 ORTHO05D004171 1.4e-17 94.0 117 54.7
CiPaw.05G127600 Carya illinoinensis HOM05D003853 ORTHO05D004171 1.8e-17 93.6 134 50.0
Oeu048150.1 Olea europaea HOM05D003853 ORTHO05D004171 3.1e-17 92.8 125 48.0
TWI75G0276 Tripterygium wilfordii HOM05D003853 ORTHO05D004171 4.0e-17 92.4 137 43.1
PGR102G0417 Punica granatum HOM05D003853 ORTHO05D004171 6.8e-17 91.7 123 59.3
PGR102G3239 Punica granatum HOM05D003853 ORTHO05D004171 6.8e-17 91.7 123 59.3
Sc04g0007740 Simmondsia chinensis HOM05D003853 ORTHO05D004171 6.8e-17 91.7 129 42.6
PGSC0003DMG400035643 Solanum tuberosum HOM05D003853 ORTHO05D004171 6.8e-17 91.7 117 44.4
Potri.008G093200 Populus trichocarpa HOM05D003853 ORTHO05D004171 1.5e-16 90.5 78 60.3
Actinidia12318 Actinidia chinensis HOM05D003853 ORTHO05D004171 2.6e-16 89.7 81 59.3
ClCG05G023860 Citrullus lanatus HOM05D003853 ORTHO05D004171 2.6e-16 89.7 138 53.6
Ah.03g139150 Amaranthus hybridus HOM05D003853 ORTHO05D004171 3.4e-16 89.4 125 43.2
CDE02G2907 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 3.4e-16 89.4 106 46.2
Peaxi162Scf00930g00051 Petunia axillaris HOM05D003853 ORTHO05D004171 4.4e-16 89.0 116 50.9
Cpa.g.sc1.96 Carica papaya HOM05D003853 ORTHO05D004171 5.8e-16 88.6 110 48.2
Duzib251G0287 Durio zibethinus HOM05D003853 ORTHO05D004171 5.8e-16 88.6 116 46.6
Ah.03g139160 Amaranthus hybridus HOM05D003853 ORTHO05D004171 1.3e-15 87.4 70 64.3
Lj6P782T102 Lonicera japonica HOM05D003853 ORTHO05D004171 1.3e-15 87.4 118 50.8
CsaV3_5G033160 Cucumis sativus L. HOM05D003853 ORTHO05D004171 1.7e-15 87.0 129 51.9
AUR62003133 Chenopodium quinoa HOM05D003853 ORTHO05D004171 2.9e-15 86.3 72 59.7
Sabra08G0070000 Salix brachista HOM05D003853 ORTHO05D004171 2.9e-15 86.3 78 57.7
Thecc.02G335600 Theobroma cacao HOM05D003853 ORTHO05D004171 2.9e-15 86.3 122 44.3
ATR0111G024 Amborella trichopoda HOM05D003853 ORTHO05D004171 3.7e-15 85.9 120 42.5
SEGI_33923 Sequoiadendron giganteum HOM05D003853 ORTHO05D004171 3.7e-15 85.9 134 47.8
Manes.01G030000 Manihot esculenta HOM05D003853 ORTHO05D004171 1.1e-14 84.3 78 57.7
AUR62003132 Chenopodium quinoa HOM05D003853 ORTHO05D004171 1.4e-14 84.0 135 51.9
MELO3C012136.2 Cucumis melo HOM05D003853 ORTHO05D004171 1.9e-14 83.6 84 57.1
SGA_v2.0_scaffold16G07759 Striga asiatica HOM05D003853 ORTHO05D004171 2.4e-14 83.2 130 43.1
MSTRG.7763 Avicennia marina HOM05D003853 ORTHO05D004171 4.1e-14 82.4 117 42.7
Cpa.g.sc1.97 Carica papaya HOM05D003853 ORTHO05D004171 4.1e-14 82.4 69 65.2
Ciclev10033000m.g Citrus clementina HOM05D003853 ORTHO05D004171 4.1e-14 82.4 121 42.1
QL03p070993 Quercus lobata HOM05D003853 ORTHO05D004171 4.1e-14 82.4 119 41.2
CSS0028215 Camellia sinensis var. sinensis HOM05D003853 ORTHO05D004171 5.4e-14 82.0 133 54.1
CSS0045101 Camellia sinensis var. sinensis HOM05D003853 ORTHO05D004171 7.1e-14 81.6 138 52.2
COL.COLO4_27925 Corchorus olitorius HOM05D003853 ORTHO05D004171 7.1e-14 81.6 138 50.7
Actinidia28167 Actinidia chinensis HOM05D003853 ORTHO05D004171 9.2e-14 81.3 81 56.8
Eucgr.B03178 Eucalyptus grandis HOM05D003853 ORTHO05D004171 1.6e-13 80.5 73 53.4
AUR62007952 Chenopodium quinoa HOM05D003853 ORTHO05D004171 2.1e-13 80.1 66 60.6
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.7e-13 79.7 85 48.2
Potri.010G161200 Populus trichocarpa HOM05D003853 ORTHO05D004171 2.7e-13 79.7 79 55.7
AT2G03440 Arabidopsis thaliana HOM05D003853 ORTHO05D004171 4.6e-13 79.0 121 48.8
BcaC06g31183 Brassica carinata HOM05D003853 ORTHO05D004171 6.0e-13 78.6 130 37.7
Thhalv10004968m.g Eutrema salsugineum HOM05D003853 ORTHO05D004171 6.0e-13 78.6 85 47.1
Sp1g12030 Schrenkiella parvula HOM05D003853 ORTHO05D004171 6.0e-13 78.6 82 51.2
BcaB07g30301 Brassica carinata HOM05D003853 ORTHO05D004171 7.8e-13 78.2 128 44.5
CARHR014300 Cardamine hirsuta HOM05D003853 ORTHO05D004171 7.8e-13 78.2 119 46.2
Sed0005785 Sechium edule HOM05D003853 ORTHO05D004171 7.8e-13 78.2 118 44.1
BcaC06g33998 Brassica carinata HOM05D003853 ORTHO05D004171 1.0e-12 77.8 75 53.3
C07p33870 Brassica napus HOM05D003853 ORTHO05D004171 1.0e-12 77.8 75 53.3
BolC7t43901H Brassica oleracea HOM05D003853 ORTHO05D004171 1.0e-12 77.8 75 53.3
BraA06t27202Z Brassica rapa HOM05D003853 ORTHO05D004171 1.0e-12 77.8 75 53.3
QL03p071009 Quercus lobata HOM05D003853 ORTHO05D004171 1.3e-12 77.4 69 55.1
A02p33450 Brassica napus HOM05D003853 ORTHO05D004171 1.7e-12 77.0 124 43.5
CARHR145780 Cardamine hirsuta HOM05D003853 ORTHO05D004171 1.7e-12 77.0 134 46.3
AL5G13190 Arabidopsis lyrata HOM05D003853 ORTHO05D004171 2.3e-12 76.6 75 53.3
MBI16_g00500_MAGBIO Magnolia biondii HOM05D003853 ORTHO05D004171 2.3e-12 76.6 124 52.4
A06p43140 Brassica napus HOM05D003853 ORTHO05D004171 3.0e-12 76.3 75 53.3
Migut.E00060 Erythranthe guttata HOM05D003853 ORTHO05D004171 3.0e-12 76.3 76 52.6
QL03p071021 Quercus lobata HOM05D003853 ORTHO05D004171 3.0e-12 76.3 72 52.8
Sed0019389 Sechium edule HOM05D003853 ORTHO05D004171 3.9e-12 75.9 123 53.7
BcaC03g17214 Brassica carinata HOM05D003853 ORTHO05D004171 5.1e-12 75.5 124 46.0
C02p51440 Brassica napus HOM05D003853 ORTHO05D004171 5.1e-12 75.5 124 46.0
BolC2t11232H Brassica oleracea HOM05D003853 ORTHO05D004171 5.1e-12 75.5 124 46.0
Sp2g14360 Schrenkiella parvula HOM05D003853 ORTHO05D004171 5.1e-12 75.5 70 55.7
Aa31LG4G16180 Aethionema arabicum HOM05D003853 ORTHO05D004171 6.6e-12 75.1 123 50.4
Carub.0005s0241 Capsella rubella HOM05D003853 ORTHO05D004171 6.6e-12 75.1 70 55.7
AL1G25770 Arabidopsis lyrata HOM05D003853 ORTHO05D004171 8.6e-12 74.7 123 44.7
Thhalv10008975m.g Eutrema salsugineum HOM05D003853 ORTHO05D004171 1.1e-11 74.3 78 48.7
Cc11_g12330 Coffea canephora HOM05D003853 ORTHO05D004171 1.9e-11 73.6 132 50.8
Sabra10G0122600 Salix brachista HOM05D003853 ORTHO05D004171 1.9e-11 73.6 121 39.7
Sabra10G0122700 Salix brachista HOM05D003853 ORTHO05D004171 1.9e-11 73.6 121 39.7
AT1G13930 Arabidopsis thaliana HOM05D003853 ORTHO05D004171 2.5e-11 73.2 85 45.9
Migut.L01216 Erythranthe guttata HOM05D003853 ORTHO05D004171 2.5e-11 73.2 102 46.1
MSTRG.2322 Avicennia marina HOM05D003853 ORTHO05D004171 3.3e-11 72.8 74 50.0
BcaB03g13120 Brassica carinata HOM05D003853 ORTHO05D004171 7.3e-11 71.6 123 43.9
BraA02t08366Z Brassica rapa HOM05D003853 ORTHO05D004171 7.3e-11 71.6 124 40.3
BraA08t35142Z Brassica rapa HOM05D003853 ORTHO05D004171 7.3e-11 71.6 75 49.3
Sopen05g007400 Solanum pennellii HOM05D003853 ORTHO05D004171 7.3e-11 71.6 73 52.1
BcaB03g13123 Brassica carinata HOM05D003853 ORTHO05D004171 9.5e-11 71.2 75 49.3
BolC8t49263H Brassica oleracea HOM05D003853 ORTHO05D004171 9.5e-11 71.2 123 49.6
Ah.03g139140 Amaranthus hybridus HOM05D003853 ORTHO05D004171 1.2e-10 70.9 88 45.5
Carub.0001s1363 Capsella rubella HOM05D003853 ORTHO05D004171 1.2e-10 70.9 75 48.0
QL03p070977 Quercus lobata HOM05D003853 ORTHO05D004171 1.2e-10 70.9 121 52.1
BcaC07g38709 Brassica carinata HOM05D003853 ORTHO05D004171 1.6e-10 70.5 75 48.0
C08p16390 Brassica napus HOM05D003853 ORTHO05D004171 1.6e-10 70.5 75 48.0
SGA_v2.0_scaffold36G14434 Striga asiatica HOM05D003853 ORTHO05D004171 3.6e-10 69.3 72 51.4
MSTRG.735 Avicennia marina HOM05D003853 ORTHO05D004171 8.1e-10 68.2 73 52.1
DCAR_027453 Daucus carota HOM05D003853 ORTHO05D004171 8.1e-10 68.2 77 53.2
BcaC07g38710 Brassica carinata HOM05D003853 ORTHO05D004171 1.1e-09 67.8 79 45.6
C08p16400 Brassica napus HOM05D003853 ORTHO05D004171 1.4e-09 67.4 74 47.3
BolC8t49264H Brassica oleracea HOM05D003853 ORTHO05D004171 1.4e-09 67.4 74 47.3
unitig_699.g19910 Utricularia gibba HOM05D003853 ORTHO05D004171 1.4e-09 67.4 96 38.5
MD16G1064200 Malus domestica HOM05D003853 ORTHO05D004171 2.3e-09 66.6 76 47.4
Peaxi162Scf00314g00022 Petunia axillaris HOM05D003853 ORTHO05D004171 2.3e-09 66.6 81 45.7
SalBow2G1975 Salvia bowleyana HOM05D003853 ORTHO05D004171 2.3e-09 66.6 71 47.9
Zm00001eb334140 Zea mays HOM05D003853 ORTHO05D004171 2.3e-09 66.6 73 52.1
Zm00001eb007060 Zea mays HOM05D003853 ORTHO05D004171 3.1e-09 66.2 67 56.7
FAN17G1589 Fragaria x ananassa HOM05D003853 ORTHO05D004171 5.2e-09 65.5 69 47.8
Glyma.07G226567 Glycine max HOM05D003853 ORTHO05D004171 5.2e-09 65.5 80 43.8
Glyma.07G226633 Glycine max HOM05D003853 ORTHO05D004171 5.2e-09 65.5 80 43.8
MD13G1065700 Malus domestica HOM05D003853 ORTHO05D004171 5.2e-09 65.5 73 49.3
SGA_v2.0_scaffold287G47154 Striga asiatica HOM05D003853 ORTHO05D004171 5.2e-09 65.5 72 44.4
Phvul.002G168000 Phaseolus vulgaris HOM05D003853 ORTHO05D004171 6.8e-09 65.1 70 50.0
SEGI_07999 Sequoiadendron giganteum HOM05D003853 ORTHO05D004171 6.8e-09 65.1 158 41.1
PSO017G6890 Papaver somniferum HOM05D003853 ORTHO05D004171 8.9e-09 64.7 73 50.7
FAN12G3704 Fragaria x ananassa HOM05D002141 ORTHO05D002119 1.2e-08 64.3 69 46.4
A08p32180 Brassica napus HOM05D003853 ORTHO05D004171 1.5e-08 63.9 68 48.5
PGSC0003DMG400028384 Solanum tuberosum HOM05D003853 ORTHO05D004171 1.5e-08 63.9 79 43.0
Nitab4.5_0015741g0010 Nicotiana tabacum HOM05D003853 ORTHO05D004171 2.0e-08 63.5 78 44.9
CDE02G3795 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 2.6e-08 63.2 47 70.2
COL.COLO4_27926 Corchorus olitorius HOM05D003853 ORTHO05D004171 2.6e-08 63.2 80 45.0
Rhsim03G0019300 Rhododendron simsii HOM05D003853 ORTHO05D004171 2.6e-08 63.2 72 47.2
SalBow2G1698 Salvia bowleyana HOM05D003853 ORTHO05D004171 2.6e-08 63.2 127 38.6
Solyc05g012570.3 Solanum lycopersicum HOM05D003853 ORTHO05D004171 2.6e-08 63.2 74 45.9
Ah.02g126530 Amaranthus hybridus HOM05D003853 ORTHO05D004171 3.4e-08 62.8 81 45.7
PSO478G4998 Papaver somniferum HOM05D003853 ORTHO05D004171 3.4e-08 62.8 73 49.3
ECA234G0349 Erigeron canadensis HOM05D003853 ORTHO05D004171 4.4e-08 62.4 70 48.6
VMungo0251G2653 Vigna mungo HOM05D003853 ORTHO05D004171 4.4e-08 62.4 80 45.0
CANSAT64G1198 Cannabis sativa HOM05D003853 ORTHO05D004171 5.8e-08 62.0 107 53.3
CAN.G1340.8 Capsicum annuum HOM05D003853 ORTHO05D004171 5.8e-08 62.0 74 41.9
Lsat_1_v5_gn_4_11980 Lactuca sativa HOM05D003853 ORTHO05D004171 5.8e-08 62.0 85 43.5
Sopen05g007410 Solanum pennellii HOM05D003853 ORTHO05D004171 7.6e-08 61.6 75 45.3
Glyma.20G027200 Glycine max HOM05D003853 ORTHO05D004171 9.9e-08 61.2 80 43.8
Nitab4.5_0000334g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 9.9e-08 61.2 74 41.9
vmacro22355 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 1.3e-07 60.8 70 47.1
ECA246G1290 Erigeron canadensis HOM05D003853 ORTHO05D004171 1.7e-07 60.5 74 47.3
HanXRQChr10g0308121 Helianthus annuus HOM05D003853 ORTHO05D004171 2.2e-07 60.1 84 41.7
Os10g0330000 Oryza sativa ssp. japonica HOM05D003853 ORTHO05D004171 2.2e-07 60.1 69 46.4
Lalb_Chr05g0215091 Lupinus albus HOM05D003853 ORTHO05D004171 4.9e-07 58.9 70 48.6
Prupe.1G282500 Prunus persica HOM05D003853 ORTHO05D004171 4.9e-07 58.9 72 48.6
A08p32170 Brassica napus HOM05D003853 ORTHO05D004171 6.4e-07 58.5 73 37.0
BraA08t35141Z Brassica rapa HOM05D003853 ORTHO05D004171 6.4e-07 58.5 73 37.0
TPR.G2267 Trifolium pratense HOM05D003853 ORTHO05D004171 8.4e-07 58.2 71 47.9
ATR0579G128 Amborella trichopoda HOM05D003853 ORTHO05D004171 1.4e-06 57.4 49 61.2
Sc04g0007730 Simmondsia chinensis HOM05D003853 ORTHO05D004171 1.9e-06 57.0 112 44.6
vmacro22354 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 1.9e-06 57.0 64 50.0
Lj4g0005239 Lotus japonicus HOM05D003853 ORTHO05D004171 2.4e-06 56.6 69 43.5
Lalb_Chr17g0341041 Lupinus albus HOM05D003853 ORTHO05D004171 2.4e-06 56.6 72 44.4
AUR62003131 Chenopodium quinoa HOM05D003853 ORTHO05D004171 4.1e-06 55.8 84 38.1
Lsat_1_v5_gn_3_56161 Lactuca sativa HOM05D003853 ORTHO05D004171 4.1e-06 55.8 77 40.3
Psat7g135240 Pisum sativum HOM05D003853 ORTHO05D004171 4.1e-06 55.8 77 42.9
Psat7g135200 Pisum sativum HOM05D003853 ORTHO05D004171 5.4e-06 55.5 79 45.6
AUR62007951 Chenopodium quinoa HOM05D003853 ORTHO05D004171 7.1e-06 55.1 84 38.1
HanXRQChr15g0477051 Helianthus annuus HOM05D003853 ORTHO05D004171 7.1e-06 55.1 80 41.2
Ca_18813_v3 Cicer arietinum L. HOM05D003853 ORTHO05D004171 9.2e-06 54.7 75 42.7


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