Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1862 Ceratophyllum demersum HOM05D003470 ORTHO05D004157 7.5e-97 357.5 218 100.0
TAR623G0591 Trochodendron aralioides HOM05D003470 ORTHO05D004157 2.1e-38 163.3 215 47.0
TAR369G0117 Trochodendron aralioides HOM05D003470 ORTHO05D004157 1.8e-37 160.2 185 50.8
CDE06G1109 Ceratophyllum demersum HOM05D003470 ORTHO05D004157 1.6e-35 153.7 186 51.1
Sabra08G0020000 Salix brachista HOM05D003470 ORTHO05D004157 6.3e-35 151.8 202 47.0
TAR633G0390 Trochodendron aralioides HOM05D003470 ORTHO05D004157 6.3e-35 151.8 210 46.2
Nn2g13883 Nelumbo nucifera HOM05D003470 ORTHO05D004157 8.2e-35 151.4 214 50.5
Potri.008G029800 Populus trichocarpa HOM05D003470 ORTHO05D004157 2.4e-34 149.8 183 49.7
Duzib114G1051 Durio zibethinus HOM05D003470 ORTHO05D004157 1.2e-33 147.5 219 44.7
Atru.chr12.915 Acer truncatum HOM05D003470 ORTHO05D004157 2.0e-33 146.7 209 47.4
Gohir.D10G208000 Gossypium hirsutum HOM05D003470 ORTHO05D004157 2.6e-33 146.4 219 44.7
Thecc.10G090100 Theobroma cacao HOM05D003470 ORTHO05D004157 5.9e-33 145.2 219 42.0
Ciclev10033678m.g Citrus clementina HOM05D003470 ORTHO05D004157 1.0e-32 144.4 184 46.7
Gorai.011G233700 Gossypium raimondii HOM05D003470 ORTHO05D004157 1.3e-32 144.1 220 44.1
Gohir.A10G200100 Gossypium hirsutum HOM05D003470 ORTHO05D004157 1.7e-32 143.7 217 44.2
Aqoxy1G01047 Aquilegia oxysepala HOM05D003470 ORTHO05D004157 2.2e-32 143.3 179 46.4
GSVIVG01033709001 Vitis vinifera HOM05D003470 ORTHO05D004157 6.5e-32 141.7 210 44.8
PSO063G0006 Papaver somniferum HOM05D003470 ORTHO05D004157 8.5e-32 141.4 204 43.6
PSO339G3515 Papaver somniferum HOM05D003470 ORTHO05D004157 5.5e-31 138.7 204 43.1
Actinidia18557 Actinidia chinensis HOM05D003470 ORTHO05D004157 1.6e-30 137.1 203 43.8
Cpa.g.sc53.171 Carica papaya HOM05D003470 ORTHO05D004157 2.7e-30 136.3 183 44.3
Rhsim03G0111500 Rhododendron simsii HOM05D003470 ORTHO05D004157 2.7e-30 136.3 188 44.7
vmacro07200 Vaccinium macrocarpon HOM05D003470 ORTHO05D004157 2.7e-30 136.3 182 46.7
CSS0002390 Camellia sinensis var. sinensis HOM05D003470 ORTHO05D004157 6.1e-30 135.2 191 46.6
COL.COLO4_32876 Corchorus olitorius HOM05D003470 ORTHO05D004157 1.0e-29 134.4 203 42.9
HanXRQChr08g0218281 Helianthus annuus HOM05D003470 ORTHO05D004157 1.0e-29 134.4 209 42.1
Duzib106G0260 Durio zibethinus HOM05D003470 ORTHO05D004157 6.7e-29 131.7 185 47.0
Eucgr.G02735 Eucalyptus grandis HOM05D003470 ORTHO05D004157 3.3e-28 129.4 184 44.0
Nn6g35185 Nelumbo nucifera HOM05D003470 ORTHO05D004157 5.7e-28 128.6 205 45.9
DCAR_006389 Daucus carota HOM05D003470 ORTHO05D004157 1.3e-27 127.5 194 42.3
GSVIVG01016161001 Vitis vinifera HOM05D003470 ORTHO05D004157 1.7e-27 127.1 191 46.6
ECA238G1102 Erigeron canadensis HOM05D003470 ORTHO05D004157 6.3e-27 125.2 212 40.1
CDE03G0074 Ceratophyllum demersum HOM05D003470 ORTHO05D004157 1.1e-26 124.4 149 52.3
QL07p041535 Quercus lobata HOM05D003470 ORTHO05D004157 1.8e-26 123.6 214 38.3
Potri.006G120400 Populus trichocarpa HOM05D003470 ORTHO05D004157 2.4e-26 123.2 203 38.9
Prupe.7G123700 Prunus persica HOM05D003470 ORTHO05D004157 3.1e-26 122.9 165 42.4
Sabra06G0094700 Salix brachista HOM05D003470 ORTHO05D004157 4.1e-26 122.5 203 38.9
Sc20g0001480 Simmondsia chinensis HOM05D003470 ORTHO05D004157 5.3e-26 122.1 206 38.8
MD12G1103600 Malus domestica HOM05D003470 ORTHO05D004157 3.4e-25 119.4 206 37.4
MD14G1098000 Malus domestica HOM05D003470 ORTHO05D004157 4.5e-25 119.0 200 37.0
Gohir.A09G143900 Gossypium hirsutum HOM05D003470 ORTHO05D004157 1.0e-24 117.9 180 38.3
CiPaw.10G002200 Carya illinoinensis HOM05D003470 ORTHO05D004157 2.2e-24 116.7 215 36.7
Zm00001eb404310 Zea mays HOM05D003470 ORTHO05D004157 2.2e-24 116.7 194 38.1
TWI38G0957 Tripterygium wilfordii HOM05D003470 ORTHO05D004157 2.9e-24 116.3 184 41.3
TWI74G0295 Tripterygium wilfordii HOM05D003470 ORTHO05D004157 3.8e-24 115.9 184 39.7
Actinidia28929 Actinidia chinensis HOM05D003470 ORTHO05D004157 5.0e-24 115.5 207 44.0
Hund06764 Selenicereus undatus HOM05D003470 ORTHO05D004157 5.0e-24 115.5 206 38.8
CSS0012208 Camellia sinensis var. sinensis HOM05D003470 ORTHO05D004157 1.4e-23 114.0 185 44.9
CSS0007947 Camellia sinensis var. sinensis HOM05D003470 ORTHO05D004157 1.9e-23 113.6 185 44.9
PGR142G1299 Punica granatum HOM05D003470 ORTHO05D004157 2.5e-23 113.2 207 38.6
Haze_16780 Corylus avellana HOM05D003470 ORTHO05D004157 3.2e-23 112.8 183 39.9
Lsat_1_v5_gn_2_103301 Lactuca sativa HOM05D003470 ORTHO05D004157 7.2e-23 111.7 206 36.9
Manes.10G053000 Manihot esculenta HOM05D003470 ORTHO05D004157 7.2e-23 111.7 201 39.8
Manes.08G016800 Manihot esculenta HOM05D003470 ORTHO05D004157 9.4e-23 111.3 153 43.8
Thecc.05G074600 Theobroma cacao HOM05D003470 ORTHO05D004157 1.2e-22 110.9 180 36.1
Dinv37350 Davidia involucrata HOM05D003470 ORTHO05D004157 1.6e-22 110.5 185 45.4
Haze_19469 Corylus avellana HOM05D003470 ORTHO05D004157 3.6e-22 109.4 214 38.3
HanXRQChr14g0456131 Helianthus annuus HOM05D003470 ORTHO05D004157 3.6e-22 109.4 218 33.5
RcHm_v2.0_Chr3g0471201 Rosa chinensis HOM05D003470 ORTHO05D004157 3.6e-22 109.4 170 41.2
HPP92_008497 Vanilla planifolia HOM05D003470 ORTHO05D004157 3.6e-22 109.4 196 35.7
Nitab4.5_0000593g0330 Nicotiana tabacum HOM05D003470 ORTHO05D004157 4.7e-22 109.0 218 35.8
Actinidia26639 Actinidia chinensis HOM05D003470 ORTHO05D004157 7.9e-22 108.2 184 47.3
Zm00001eb000590 Zea mays HOM05D003470 ORTHO05D004157 1.0e-21 107.8 160 39.4
MSTRG.19203 Avicennia marina HOM05D003470 ORTHO05D004157 1.4e-21 107.5 185 43.2
Nitab4.5_0000255g0010 Nicotiana tabacum HOM05D003470 ORTHO05D004157 2.3e-21 106.7 207 35.7
Solyc09g008530.3 Solanum lycopersicum HOM05D003470 ORTHO05D004157 3.9e-21 105.9 180 38.3
CAN.G135.27 Capsicum annuum HOM05D003470 ORTHO05D004157 5.2e-21 105.5 206 37.4
Atru.chr8.1716 Acer truncatum HOM05D003470 ORTHO05D004157 8.8e-21 104.8 209 34.9
ATR0043G047 Amborella trichopoda HOM05D003470 ORTHO05D004157 1.1e-20 104.4 192 38.5
Nitab4.5_0004731g0020 Nicotiana tabacum HOM05D003470 ORTHO05D004157 1.5e-20 104.0 177 39.0
Oeu026700.1 Olea europaea HOM05D003470 ORTHO05D004157 2.6e-20 103.2 190 40.5
SalBow3G0781 Salvia bowleyana HOM05D003470 ORTHO05D004157 3.3e-20 102.8 191 38.7
Sopen09g003360 Solanum pennellii HOM05D003470 ORTHO05D004157 5.7e-20 102.1 185 37.3
Gorai.006G160300 Gossypium raimondii HOM05D003470 ORTHO05D004157 1.7e-19 100.5 213 33.8
Migut.J00469 Erythranthe guttata HOM05D003470 ORTHO05D004157 2.8e-19 99.8 188 34.0
FvH4_6g17113 Fragaria vesca HOM05D003470 ORTHO05D004157 3.7e-19 99.4 200 34.5
FAN14G5641 Fragaria x ananassa HOM05D003470 ORTHO05D004157 6.3e-19 98.6 200 34.0
AUR62035493 Chenopodium quinoa HOM05D003470 ORTHO05D004157 8.2e-19 98.2 165 38.2
ClCG08G007930 Citrullus lanatus HOM05D003470 ORTHO05D004157 8.2e-19 98.2 188 35.6
Gohir.D09G139850 Gossypium hirsutum HOM05D003470 ORTHO05D004157 1.1e-18 97.8 180 34.4
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 1.8e-18 97.1 179 38.0
Lalb_Chr02g0151131 Lupinus albus HOM05D003470 ORTHO05D004157 1.8e-18 97.1 204 34.3
Lsat_1_v5_gn_6_28040 Lactuca sativa HOM05D003470 ORTHO05D004157 2.4e-18 96.7 203 32.0
Os10g0547000 Oryza sativa ssp. japonica HOM05D003470 ORTHO05D004157 2.4e-18 96.7 204 34.3
Nitab4.5_0003906g0030 Nicotiana tabacum HOM05D003470 ORTHO05D004157 3.1e-18 96.3 214 33.6
FAN05G4328 Fragaria x ananassa HOM05D003470 ORTHO05D004157 4.1e-18 95.9 200 34.0
Sopen11g003760 Solanum pennellii HOM05D003470 ORTHO05D004157 4.1e-18 95.9 207 34.8
PGSC0003DMG400003903 Solanum tuberosum HOM05D003470 ORTHO05D004157 5.3e-18 95.5 160 39.4
Solyc11g007900.3 Solanum lycopersicum HOM05D003470 ORTHO05D004157 7.0e-18 95.1 183 36.1
Sed0009504 Sechium edule HOM05D003470 ORTHO05D004157 9.1e-18 94.7 192 31.2
Phvul.007G145600 Phaseolus vulgaris HOM05D003470 ORTHO05D004157 1.2e-17 94.4 184 36.4
FAN05G3818 Fragaria x ananassa HOM05D003470 ORTHO05D004157 1.6e-17 94.0 200 33.5
CiPaw.09G004500 Carya illinoinensis HOM05D003470 ORTHO05D004157 2.6e-17 93.2 162 35.8
Glyma.10G062800 Glycine max HOM05D003470 ORTHO05D004157 2.6e-17 93.2 185 37.8
AUR62019445 Chenopodium quinoa HOM05D002464 ORTHO05D002530 4.5e-17 92.4 192 34.9
Sc06g0002130 Simmondsia chinensis HOM05D003470 ORTHO05D004157 4.5e-17 92.4 177 35.0
Eucgr.A01602 Eucalyptus grandis HOM05D003470 ORTHO05D004157 7.7e-17 91.7 185 36.2
Lj3C994T12 Lonicera japonica HOM05D003470 ORTHO05D004157 7.7e-17 91.7 180 40.6
FAN09G0366 Fragaria x ananassa HOM05D003470 ORTHO05D004157 1.0e-16 91.3 200 34.0
Ca_10457_v3 Cicer arietinum L. HOM05D003470 ORTHO05D004157 1.7e-16 90.5 186 35.5
ECA233G0686 Erigeron canadensis HOM05D003470 ORTHO05D004157 1.7e-16 90.5 194 33.5
Duzib128G1576 Durio zibethinus HOM05D003470 ORTHO05D004157 2.9e-16 89.7 181 34.3
Psat6g173600 Pisum sativum HOM05D003470 ORTHO05D004157 5.0e-16 89.0 177 36.7
Rhsim03G0087000 Rhododendron simsii HOM05D003470 ORTHO05D004157 5.0e-16 89.0 181 36.5
Glyma.13G147300 Glycine max HOM05D003470 ORTHO05D004157 6.5e-16 88.6 185 42.2
VMungo0720G1037 Vigna mungo HOM05D003470 ORTHO05D004157 1.9e-15 87.0 183 35.5
Haze_16781 Corylus avellana HOM05D003470 ORTHO05D004157 2.5e-15 86.7 191 35.1
Lj5g0020068 Lotus japonicus HOM05D003470 ORTHO05D004157 2.5e-15 86.7 185 37.3
Zm00001eb391920 Zea mays HOM05D003470 ORTHO05D004157 1.6e-14 84.0 197 34.0
PSO478G4813 Papaver somniferum HOM05D003470 ORTHO05D004157 2.1e-14 83.6 167 44.3
Phvul.007G226600 Phaseolus vulgaris HOM05D003470 ORTHO05D004157 2.1e-14 83.6 200 36.0
HanXRQChr13g0400491 Helianthus annuus HOM05D003470 ORTHO05D004157 8.0e-14 81.6 180 35.0
Glyma.10G198700 Glycine max HOM05D003470 ORTHO05D004157 5.2e-13 79.0 146 37.0
SalBow6G0046 Salvia bowleyana HOM05D003470 ORTHO05D004157 1.5e-12 77.4 212 29.2
Cpa.g.sc5.136 Carica papaya HOM05D003470 ORTHO05D004157 2.0e-12 77.0 191 34.6
COL.COLO4_22242 Corchorus olitorius HOM05D003470 ORTHO05D004157 5.7e-12 75.5 181 32.0
Cc06_g04710 Coffea canephora HOM05D003470 ORTHO05D004157 9.7e-12 74.7 153 42.5
Lj5g0018822 Lotus japonicus HOM05D003470 ORTHO05D004157 1.7e-11 73.9 211 29.4
Medtr1g090807 Medicago truncatula HOM05D003470 ORTHO05D004157 1.7e-11 73.9 154 34.4
Migut.F01673 Erythranthe guttata HOM05D003470 ORTHO05D004157 4.8e-11 72.4 184 32.1
TPR.G37812 Trifolium pratense HOM05D003470 ORTHO05D004157 8.2e-11 71.6 161 34.2
SEGI_27097 Sequoiadendron giganteum HOM05D003470 ORTHO05D004157 1.1e-10 71.2 187 35.8
Duzib093G1940 Durio zibethinus HOM05D003470 ORTHO05D004157 2.4e-10 70.1 97 39.2
ECA233G4972 Erigeron canadensis HOM05D003470 ORTHO05D004157 2.4e-10 70.1 136 36.8
Peaxi162Scf00543g00019 Petunia axillaris HOM05D003470 ORTHO05D004157 9.1e-10 68.2 186 29.6
Ca_11537_v3 Cicer arietinum L. HOM05D003470 ORTHO05D004157 1.0e-08 64.7 185 36.2
Lsat_1_v5_gn_8_17720 Lactuca sativa HOM05D003470 ORTHO05D004157 3.8e-08 62.8 152 30.3
Psat6g076760 Pisum sativum HOM05D003470 ORTHO05D004157 3.8e-08 62.8 134 35.1
arahy.Tifrunner.gnm1.ann1.8W3QW7 Arachis hypogaea HOM05D003470 ORTHO05D004157 8.5e-08 61.6 86 39.5
arahy.Tifrunner.gnm1.ann1.FKX1H2 Arachis hypogaea HOM05D003470 ORTHO05D004157 8.5e-08 61.6 86 39.5
Medtr1g062200 Medicago truncatula HOM05D003470 ORTHO05D004157 1.5e-07 60.8 86 41.9
VMungo0720G2647 Vigna mungo HOM05D003470 ORTHO05D000001 1.5e-07 60.8 213 30.0
Dinv31268 Davidia involucrata HOM05D003470 ORTHO05D004157 1.9e-07 60.5 76 46.1
Medtr6g014000 Medicago truncatula HOM05D000027 ORTHO05D004157 1.2e-06 57.8 80 40.0
Lj3A935T49 Lonicera japonica HOM05D003470 ORTHO05D004157 4.7e-06 55.8 155 30.3
CANSAT78G0551 Cannabis sativa HOM05D003470 ORTHO05D004157 8.0e-06 55.1 81 37.0


User provided reference genes

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