Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1858 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.9e-130 469.2 230 100.0
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 4.0e-56 222.2 182 65.9
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 4.9e-14 82.4 188 34.0
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 1.2e-12 77.8 143 39.9
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 2.7e-12 76.6 140 36.4
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 4.6e-12 75.9 191 34.6
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 4.6e-12 75.9 164 34.8
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 3.9e-11 72.8 180 33.3
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 3.9e-11 72.8 140 36.4
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 5.1e-11 72.4 105 41.9
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 8.7e-11 71.6 138 34.8
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 1.9e-10 70.5 217 29.0
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 2.5e-10 70.1 144 36.1
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 3.3e-10 69.7 142 35.2
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 4.3e-10 69.3 180 31.7
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 5.6e-10 68.9 184 31.0
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 9.6e-10 68.2 140 35.7
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 9.6e-10 68.2 179 32.4
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 9.6e-10 68.2 179 32.4
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 1.6e-09 67.4 119 36.1
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 1.6e-09 67.4 141 34.0
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 2.1e-09 67.0 115 38.3
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 2.1e-09 67.0 138 35.5
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 2.8e-09 66.6 143 33.6
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 2.8e-09 66.6 155 33.5
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 2.8e-09 66.6 136 33.8
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 3.7e-09 66.2 167 31.1
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 4.8e-09 65.9 112 37.5
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 4.8e-09 65.9 102 39.2
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 4.8e-09 65.9 125 36.8
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 6.2e-09 65.5 119 36.1
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 6.2e-09 65.5 119 36.1
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 6.2e-09 65.5 152 33.6
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 8.1e-09 65.1 153 33.3
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 8.1e-09 65.1 146 34.2
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 8.1e-09 65.1 146 34.2
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 8.1e-09 65.1 115 38.3
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 8.1e-09 65.1 181 29.8
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 1.1e-08 64.7 118 38.1
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 1.1e-08 64.7 119 37.8
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 1.1e-08 64.7 141 34.8
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 1.4e-08 64.3 122 36.1
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.4e-08 64.3 168 30.4
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 1.4e-08 64.3 106 36.8
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 1.4e-08 64.3 159 34.0
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 1.8e-08 63.9 104 39.4
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 1.8e-08 63.9 80 46.2
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 1.8e-08 63.9 142 33.8
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 2.4e-08 63.5 125 34.4
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 2.4e-08 63.5 125 34.4
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 2.4e-08 63.5 141 33.3
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 2.4e-08 63.5 139 33.1
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 2.4e-08 63.5 141 35.5
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 3.1e-08 63.2 141 34.0
SEGI_07805 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 3.1e-08 63.2 129 34.1
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 4.0e-08 62.8 125 34.4
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 4.0e-08 62.8 125 34.4
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 4.0e-08 62.8 180 30.0
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.0e-08 62.8 146 34.9
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.0e-08 62.8 146 34.9
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 4.0e-08 62.8 146 34.9
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 5.3e-08 62.4 117 37.6
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 5.3e-08 62.4 142 31.7
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 5.3e-08 62.4 204 28.9
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 6.9e-08 62.0 127 32.3
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 9.0e-08 61.6 143 32.9
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 1.2e-07 61.2 70 50.0
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 1.5e-07 60.8 122 35.2
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 1.5e-07 60.8 194 29.9
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 2.0e-07 60.5 146 33.6
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 2.0e-07 60.5 102 38.2
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.0e-07 60.5 125 35.2
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 2.0e-07 60.5 188 30.9
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 2.0e-07 60.5 103 36.9
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 2.6e-07 60.1 117 36.8
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 2.6e-07 60.1 141 34.0
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 3.4e-07 59.7 104 36.5
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 5.8e-07 58.9 106 35.8
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 7.6e-07 58.5 142 32.4
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 1.0e-06 58.2 139 32.4
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 1.0e-06 58.2 178 29.2
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 1.3e-06 57.8 104 36.5
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.3e-06 57.8 106 36.8
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 1.7e-06 57.4 99 36.4
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 2.2e-06 57.0 129 31.8
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 2.2e-06 57.0 106 34.9
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 2.2e-06 57.0 162 29.6
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 2.9e-06 56.6 117 34.2
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 2.9e-06 56.6 173 29.5
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 3.8e-06 56.2 127 35.4
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 3.8e-06 56.2 103 35.9
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 4.9e-06 55.8 127 34.6
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 4.9e-06 55.8 127 33.1
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 4.9e-06 55.8 50 56.0
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 4.9e-06 55.8 113 32.7
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 8.4e-06 55.1 144 31.2


User provided reference genes

Program Settings