Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 5.9e-172 607.4 309 100.0
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 6.2e-129 464.5 315 80.0
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 5.4e-125 451.4 316 75.9
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.2e-119 433.7 295 77.3
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 8.4e-118 427.6 326 69.3
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 2.4e-117 426.0 322 69.6
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 4.2e-117 425.2 322 68.9
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 2.1e-116 422.9 323 69.3
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 2.1e-116 422.9 314 71.0
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 3.9e-115 418.7 318 70.8
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 6.6e-115 417.9 324 69.4
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-114 417.2 264 81.1
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 2.5e-114 416.0 315 70.8
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 7.3e-114 414.5 319 70.2
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.3e-113 413.7 325 68.0
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 4.8e-113 411.8 318 68.2
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 6.2e-113 411.4 321 67.9
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 1.4e-112 410.2 321 68.5
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.8e-112 409.8 259 81.5
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.8e-112 409.8 314 70.1
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 2.4e-112 409.5 320 68.8
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 3.1e-112 409.1 324 68.5
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 3.1e-112 409.1 316 70.9
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 6.9e-112 407.9 286 74.5
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.2e-111 407.1 260 78.8
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 1.2e-111 407.1 325 68.0
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 4.5e-111 405.2 249 83.5
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 4.5e-111 405.2 327 67.3
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 7.6e-111 404.4 319 69.9
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.3e-110 403.7 264 76.9
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.2e-110 402.9 267 78.3
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.2e-110 402.9 319 69.6
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 2.9e-110 402.5 323 66.9
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 3.8e-110 402.1 335 66.0
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 4.9e-110 401.7 263 77.6
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.9e-110 401.7 319 69.3
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 6.4e-110 401.4 270 77.8
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.1e-109 400.6 290 74.1
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 1.4e-109 400.2 263 77.6
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 1.9e-109 399.8 289 72.3
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 1.9e-109 399.8 315 67.9
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.4e-109 399.4 261 79.7
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 5.4e-109 398.3 261 76.6
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 5.4e-109 398.3 261 76.6
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 5.4e-109 398.3 263 77.2
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 5.4e-109 398.3 261 76.6
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 7.1e-109 397.9 236 87.3
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 1.2e-108 397.1 261 76.2
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.2e-108 397.1 274 74.8
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.6e-108 396.7 325 67.1
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 2.7e-108 396.0 259 79.5
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 3.5e-108 395.6 264 76.5
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 3.5e-108 395.6 261 77.0
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 1.3e-107 393.7 270 75.9
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.8e-107 393.3 259 79.2
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 6.7e-107 391.3 299 70.2
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.1e-106 390.6 309 68.3
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 1.5e-106 390.2 281 71.5
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.1e-105 386.3 294 68.4
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 2.1e-105 386.3 310 68.1
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.8e-105 386.0 304 69.7
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 3.7e-105 385.6 261 76.6
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 4.8e-105 385.2 325 64.9
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.1e-104 384.0 261 75.9
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 1.4e-104 383.6 250 79.2
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.4e-104 383.6 304 69.1
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 1.8e-104 383.3 290 71.0
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 1.8e-104 383.3 316 67.1
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 9.0e-104 380.9 298 66.8
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.0e-102 377.5 300 68.7
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.0e-102 377.5 259 73.7
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.0e-102 377.5 299 66.6
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 1.7e-102 376.7 299 66.6
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 2.2e-102 376.3 292 70.2
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 4.9e-102 375.2 293 67.9
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.1e-101 374.0 313 66.5
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.1e-101 374.0 253 76.3
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.4e-101 373.6 260 73.1
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 2.5e-101 372.9 332 63.3
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 2.5e-101 372.9 238 79.8
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 4.2e-101 372.1 312 63.8
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.5e-101 371.7 322 64.3
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 7.1e-101 371.3 288 68.4
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 1.6e-100 370.2 292 68.5
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 7.9e-100 367.9 321 62.9
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 3.0e-99 365.9 321 62.9
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 7.4e-98 361.3 321 63.6
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 6.2e-97 358.2 274 69.7
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.2e-95 354.0 250 73.6
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.0e-94 350.9 238 75.6
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 9.7e-90 334.3 235 71.9
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 5.3e-88 328.6 220 74.5
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.4e-87 325.9 290 61.7
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 6.1e-84 315.1 216 69.4
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.2e-81 306.6 188 82.4
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.8e-80 303.5 225 70.2
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 4.1e-80 302.4 254 65.7
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 2.5e-77 293.1 260 57.3
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 1.6e-76 290.4 209 70.8
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 2.6e-74 283.1 260 55.4
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 2.6e-74 283.1 187 78.6
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 3.7e-73 279.3 268 53.0
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 2.1e-68 263.5 259 57.1
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.6e-63 247.3 251 53.4
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 4.5e-63 245.7 253 52.6
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.8e-62 242.7 269 48.7
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.6e-60 237.3 249 53.0
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 9.8e-58 228.0 254 49.6
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.4e-51 207.6 129 81.4
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.4e-51 207.6 250 44.8
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.7e-47 193.4 249 46.2
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-40 171.4 107 82.2
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 2.4e-40 170.2 246 38.2
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 1.6e-39 167.5 123 70.7
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 3.7e-25 119.8 319 35.7
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 6.4e-25 119.0 244 30.7
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 3.6e-20 103.2 235 31.1
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 5.4e-08 62.8 52 59.6
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 2.7e-07 60.5 52 65.4
SEGI_14321 Sequoiadendron giganteum HOM05D006532 ORTHO05D385294 3.9e-06 56.6 46 63.0


User provided reference genes

Program Settings