Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1773 Ceratophyllum demersum HOM05D006248 ORTHO05D007896 5.6e-43 177.2 88 100.0
Zm00001eb220920 Zea mays HOM05D006248 ORTHO05D007896 4.5e-16 87.8 66 63.6
Os10g0497100 Oryza sativa ssp. japonica HOM05D006248 ORTHO05D007896 2.2e-15 85.5 64 64.1
HPP92_007369 Vanilla planifolia HOM05D006248 ORTHO05D007896 1.9e-14 82.4 64 62.5
ECA238G3803 Erigeron canadensis HOM05D006248 ORTHO05D007896 9.4e-14 80.1 63 61.9
Nn7g36251 Nelumbo nucifera HOM05D006248 ORTHO05D007896 2.7e-13 78.6 62 62.9
ATR0579G167 Amborella trichopoda HOM05D006248 ORTHO05D007896 3.6e-13 78.2 64 53.1
Aqoxy2G03376 Aquilegia oxysepala HOM05D006248 ORTHO05D007896 3.6e-13 78.2 62 61.3
Atru.chr7.37 Acer truncatum HOM05D006248 ORTHO05D007896 4.6e-13 77.8 63 61.9
Cpa.g.sc46.160 Carica papaya HOM05D006248 ORTHO05D007896 6.1e-13 77.4 59 62.7
MBI04_g39114_MAGBIO Magnolia biondii HOM05D006248 ORTHO05D007896 1.8e-12 75.9 64 59.4
TAR374G0826 Trochodendron aralioides HOM05D006248 ORTHO05D007896 2.3e-12 75.5 63 60.3
HanXRQChr15g0490751 Helianthus annuus HOM05D006248 ORTHO05D007896 5.1e-12 74.3 63 52.4
Carub.0007s0999 Capsella rubella HOM05D006248 ORTHO05D007896 1.1e-11 73.2 61 55.7
Cfa020823 Carpinus fangiana HOM05D006248 ORTHO05D007896 1.1e-11 73.2 59 62.7
Migut.K00321 Erythranthe guttata HOM05D006248 ORTHO05D007896 1.1e-11 73.2 60 58.3
Thecc.09G029500 Theobroma cacao HOM05D006248 ORTHO05D007896 1.1e-11 73.2 59 55.9
Haze_19202 Corylus avellana HOM05D006248 ORTHO05D007896 1.5e-11 72.8 59 62.7
THA.LOC104803540 Tarenaya hassleriana HOM05D006248 ORTHO05D007896 1.5e-11 72.8 61 59.0
AL7G21560 Arabidopsis lyrata HOM05D006248 ORTHO05D007896 2.0e-11 72.4 61 54.1
BcaNung04566 Brassica carinata HOM05D006248 ORTHO05D007896 2.5e-11 72.0 61 54.1
Ciclev10008803m.g Citrus clementina HOM05D006248 ORTHO05D007896 2.5e-11 72.0 59 55.9
Lj6g0025769 Lotus japonicus HOM05D006248 ORTHO05D007896 2.5e-11 72.0 59 59.3
Sp7g28450 Schrenkiella parvula HOM05D006248 ORTHO05D007896 2.5e-11 72.0 61 54.1
CSS0008954 Camellia sinensis var. sinensis HOM05D006248 ORTHO05D007896 4.3e-11 71.2 63 57.1
Cc06_g14900 Coffea canephora HOM05D006248 ORTHO05D007896 4.3e-11 71.2 66 50.0
HanXRQChr14g0448981 Helianthus annuus HOM05D006248 ORTHO05D007896 4.3e-11 71.2 60 53.3
PSO384G3884 Papaver somniferum HOM05D006248 ORTHO05D007896 4.3e-11 71.2 63 57.1
Potri.006G183700 Populus trichocarpa HOM05D006248 ORTHO05D007896 4.3e-11 71.2 59 57.6
QL02p093323 Quercus lobata HOM05D006248 ORTHO05D007896 4.3e-11 71.2 59 59.3
CARHR238450 Cardamine hirsuta HOM05D006248 ORTHO05D007896 5.7e-11 70.9 61 54.1
COL.COLO4_18812 Corchorus olitorius HOM05D006248 ORTHO05D007896 5.7e-11 70.9 59 52.5
Oeu054273.3 Olea europaea HOM05D006248 ORTHO05D007896 5.7e-11 70.9 64 51.6
RcHm_v2.0_Chr2g0085591 Rosa chinensis HOM05D006248 ORTHO05D007896 5.7e-11 70.9 63 54.0
Actinidia38318 Actinidia chinensis HOM05D006248 ORTHO05D007896 9.7e-11 70.1 60 53.3
Ca_03171_v3 Cicer arietinum L. HOM05D006248 ORTHO05D007896 9.7e-11 70.1 60 55.0
Sc06g0007960 Simmondsia chinensis HOM05D006248 ORTHO05D007896 9.7e-11 70.1 63 54.0
GSVIVG01023612001 Vitis vinifera HOM05D006248 ORTHO05D007896 9.7e-11 70.1 60 56.7
ClCG02G020550 Citrullus lanatus HOM05D006248 ORTHO05D007896 1.3e-10 69.7 62 53.2
TWI09G0649 Tripterygium wilfordii HOM05D006248 ORTHO05D007896 1.3e-10 69.7 59 55.9
Lj6g0015066 Lotus japonicus HOM05D001145 ORTHO05D001415 1.7e-10 69.3 59 57.6
AT4G30580 Arabidopsis thaliana HOM05D006248 ORTHO05D007896 2.2e-10 68.9 61 52.5
Prupe.7G263300 Prunus persica HOM05D006248 ORTHO05D007896 2.2e-10 68.9 63 54.0
BcaNung00567 Brassica carinata HOM05D006248 ORTHO05D007896 2.8e-10 68.6 61 52.5
BolC7t46261H Brassica oleracea HOM05D006248 ORTHO05D007896 2.8e-10 68.6 61 52.5
Sabra06G0139600 Salix brachista HOM05D006248 ORTHO05D007896 2.8e-10 68.6 59 54.2
Aa31LG2G19940 Aethionema arabicum HOM05D006248 ORTHO05D007896 3.7e-10 68.2 59 50.8
A03p60090 Brassica napus HOM05D006248 ORTHO05D007896 3.7e-10 68.2 61 52.5
BraA03t15055Z Brassica rapa HOM05D006248 ORTHO05D007896 3.7e-10 68.2 61 52.5
MELO3C008959.2 Cucumis melo HOM05D006248 ORTHO05D007896 3.7e-10 68.2 62 53.2
Lsat_1_v5_gn_4_165100 Lactuca sativa HOM05D006248 ORTHO05D007896 3.7e-10 68.2 60 50.0
Medtr5g043620 Medicago truncatula HOM05D006248 ORTHO05D007896 3.7e-10 68.2 59 57.6
CsaV3_4G030910 Cucumis sativus L. HOM05D006248 ORTHO05D007896 4.8e-10 67.8 63 52.4
DCAR_019396 Daucus carota HOM05D006248 ORTHO05D007896 4.8e-10 67.8 63 54.0
PSO339G1376 Papaver somniferum HOM05D006248 ORTHO05D007896 4.8e-10 67.8 63 55.6
Thhalv10025500m.g Eutrema salsugineum HOM05D006248 ORTHO05D007896 6.3e-10 67.4 61 50.8
CsaV3_2G008470 Cucumis sativus L. HOM05D006248 ORTHO05D007896 8.2e-10 67.0 59 54.2
Mapoly0168s0025 Marchantia polymorpha HOM05D006248 ORTHO05D007896 8.2e-10 67.0 63 47.6
Sed0021098 Sechium edule HOM05D006248 ORTHO05D007896 8.2e-10 67.0 59 55.9
CANSAT80G0015 Cannabis sativa HOM05D006248 ORTHO05D007896 1.1e-09 66.6 62 51.6
CANSAT80G1584 Cannabis sativa HOM05D006248 ORTHO05D007896 1.1e-09 66.6 62 51.6
CiPaw.16G110600 Carya illinoinensis HOM05D006248 ORTHO05D007896 1.1e-09 66.6 60 51.7
MD15G1144400 Malus domestica HOM05D006248 ORTHO05D007896 1.1e-09 66.6 63 54.0
arahy.Tifrunner.gnm1.ann1.35XGVT Arachis hypogaea HOM05D006248 ORTHO05D007896 1.4e-09 66.2 59 54.2
arahy.Tifrunner.gnm1.ann1.73F3S2 Arachis hypogaea HOM05D006248 ORTHO05D007896 1.4e-09 66.2 59 54.2
FvH4_1g00880 Fragaria vesca HOM05D006248 ORTHO05D007896 1.4e-09 66.2 63 52.4
FAN23G2094 Fragaria x ananassa HOM05D000238 ORTHO05D001043 1.4e-09 66.2 63 52.4
FAN26G2974 Fragaria x ananassa HOM05D000238 ORTHO05D007896 1.4e-09 66.2 63 52.4
Manes.14G143900 Manihot esculenta HOM05D006248 ORTHO05D007896 1.4e-09 66.2 59 52.5
SalBow1G5186 Salvia bowleyana HOM05D006248 ORTHO05D007896 1.4e-09 66.2 63 50.8
arahy.Tifrunner.gnm1.ann1.VIT8JQ Arachis hypogaea HOM05D006248 ORTHO05D007896 1.8e-09 65.9 59 54.2
Gohir.D06G098450 Gossypium hirsutum HOM05D006248 ORTHO05D007896 1.8e-09 65.9 59 52.5
Gorai.010G113400 Gossypium raimondii HOM05D006248 ORTHO05D007896 1.8e-09 65.9 59 52.5
Lj7A459G62 Lonicera japonica HOM05D006248 ORTHO05D007896 1.8e-09 65.9 63 54.0
Hund24368 Selenicereus undatus HOM05D006248 ORTHO05D007896 1.8e-09 65.9 59 54.2
Actinidia27193 Actinidia chinensis HOM05D006248 ORTHO05D007896 2.4e-09 65.5 60 55.0
EL10Ac3g05888 Beta vulgaris HOM05D006248 ORTHO05D007896 2.4e-09 65.5 59 55.9
CiPaw.15G168100 Carya illinoinensis HOM05D006248 ORTHO05D007896 2.4e-09 65.5 59 55.9
CBR_g21007 Chara braunii HOM05D006248 ORTHO05D007896 2.4e-09 65.5 63 47.6
Rhsim01G0033000 Rhododendron simsii HOM05D006248 ORTHO05D007896 2.4e-09 65.5 63 52.4
Solyc07g005580.4 Solanum lycopersicum HOM05D006248 ORTHO05D007896 2.4e-09 65.5 63 50.8
Sopen07g001690 Solanum pennellii HOM05D006248 ORTHO05D007896 2.4e-09 65.5 63 50.8
PGSC0003DMG402011138 Solanum tuberosum HOM05D006248 ORTHO05D007896 2.4e-09 65.5 63 49.2
Glyma.12G163500 Glycine max HOM05D006248 ORTHO05D007896 3.1e-09 65.1 59 54.2
Gohir.A06G097800 Gossypium hirsutum HOM05D006248 ORTHO05D007896 3.1e-09 65.1 59 54.2
Lalb_Chr08g0234181 Lupinus albus HOM05D006248 ORTHO05D007896 3.1e-09 65.1 59 54.2
Psat1g022520 Pisum sativum HOM05D006248 ORTHO05D007896 3.1e-09 65.1 72 44.4
Hma1.2p1_0222F.1_g093600 Hydrangea macrophylla HOM05D006248 ORTHO05D007896 5.3e-09 64.3 60 53.3
Phvul.007G037000 Phaseolus vulgaris HOM05D006248 ORTHO05D007896 5.3e-09 64.3 59 54.2
TPR.G3534 Trifolium pratense HOM05D006248 ORTHO05D007896 5.3e-09 64.3 60 50.0
Duzib168G1034 Durio zibethinus HOM05D006248 ORTHO05D007896 6.9e-09 63.9 59 52.5
Glyma.06G220300 Glycine max HOM05D006248 ORTHO05D007896 6.9e-09 63.9 59 52.5
Duzib187G1891 Durio zibethinus HOM05D006248 ORTHO05D007896 9.1e-09 63.5 63 52.4
MD02G1007100 Malus domestica HOM05D006248 ORTHO05D007896 9.1e-09 63.5 63 50.8
vmacro16799 Vaccinium macrocarpon HOM05D006248 ORTHO05D007896 9.1e-09 63.5 63 50.8
AUR62015459 Chenopodium quinoa HOM05D006248 ORTHO05D007896 1.2e-08 63.2 59 52.5
Lsat_1_v5_gn_2_85220 Lactuca sativa HOM05D006248 ORTHO05D007896 1.2e-08 63.2 54 53.7
Peaxi162Scf00401g00615 Petunia axillaris HOM05D006248 ORTHO05D007896 1.2e-08 63.2 63 47.6
VMungo0720G3169 Vigna mungo HOM05D006248 ORTHO05D007896 1.2e-08 63.2 59 52.5
Eucgr.C02495 Eucalyptus grandis HOM05D006248 ORTHO05D007896 1.5e-08 62.8 63 52.4
SHI18557 Sapria himalayana HOM05D006248 ORTHO05D007896 1.5e-08 62.8 63 50.8
SGA_v2.0_scaffold347G49562 Striga asiatica HOM05D006248 ORTHO05D007896 1.5e-08 62.8 59 50.8
CAN.G160.64 Capsicum annuum HOM05D006248 ORTHO05D007896 2.6e-08 62.0 63 46.0
Gohir.A05G053300 Gossypium hirsutum HOM05D006248 ORTHO05D007896 2.6e-08 62.0 63 50.8
Gohir.D05G054900 Gossypium hirsutum HOM05D006248 ORTHO05D007896 5.9e-08 60.8 61 52.5
Pp3c2_20500 Physcomitrium patens HOM05D006248 ORTHO05D007896 7.7e-08 60.5 63 44.4
Nitab4.5_0006523g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 1.0e-07 60.1 63 44.4
Gorai.009G056600 Gossypium raimondii HOM05D006248 ORTHO05D007896 1.3e-07 59.7 61 50.8
MSTRG.10698 Avicennia marina HOM05D006248 ORTHO05D007896 2.2e-07 58.9 63 50.8
Nitab4.5_0005147g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 2.9e-07 58.5 74 40.5
Sed0009955 Sechium edule HOM05D006248 ORTHO05D007896 3.8e-07 58.2 59 50.8
C07p58030 Brassica napus HOM05D002357 ORTHO05D007896 8.5e-07 57.0 45 57.8
PGR102G2393 Punica granatum HOM05D006248 ORTHO05D007896 1.1e-06 56.6 59 45.8
SMO367G0591 Selaginella moellendorffii HOM05D006248 ORTHO05D007896 1.9e-06 55.8 61 41.0


User provided reference genes

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