Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1687 Ceratophyllum demersum HOM05D007881 ORTHO05D009922 1.6e-29 132.1 67 100.0
Oeu034791.1 Olea europaea HOM05D007881 ORTHO05D009922 2.4e-09 65.1 58 58.6
vmacro10404 Vaccinium macrocarpon HOM05D007881 ORTHO05D009922 5.3e-09 63.9 67 46.3
HPP92_003553 Vanilla planifolia HOM05D007881 ORTHO05D009922 5.3e-09 63.9 61 49.2
Actinidia03288 Actinidia chinensis HOM05D007881 ORTHO05D009922 6.9e-09 63.5 58 55.2
ClCG03G010640 Citrullus lanatus HOM05D007881 ORTHO05D009922 6.9e-09 63.5 61 47.5
MBI17_g00966_MAGBIO Magnolia biondii HOM05D007881 ORTHO05D009922 6.9e-09 63.5 53 66.0
TAR362G1041 Trochodendron aralioides HOM05D007881 ORTHO05D009922 9.0e-09 63.2 67 52.2
CSS0004298 Camellia sinensis var. sinensis HOM05D007881 ORTHO05D009922 2.0e-08 62.0 60 50.0
Migut.F02122 Erythranthe guttata HOM05D007881 ORTHO05D009922 2.6e-08 61.6 50 62.0
SalBow1G5699 Salvia bowleyana HOM05D007881 ORTHO05D009922 1.0e-07 59.7 42 64.3
Cc09_g03690 Coffea canephora HOM05D007881 ORTHO05D009922 1.3e-07 59.3 42 64.3
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.3e-07 59.3 41 65.9
Eucgr.B01417 Eucalyptus grandis HOM05D007881 ORTHO05D009922 1.3e-07 59.3 40 67.5
Manes.12G005400 Manihot esculenta HOM05D007881 ORTHO05D009922 1.3e-07 59.3 66 48.5
Thecc.05G194300 Theobroma cacao HOM05D007881 ORTHO05D009922 1.3e-07 59.3 61 52.5
arahy.Tifrunner.gnm1.ann1.FFCC7D Arachis hypogaea HOM05D007881 ORTHO05D009922 1.7e-07 58.9 45 62.2
arahy.Tifrunner.gnm1.ann1.X7CW9T Arachis hypogaea HOM05D007881 ORTHO05D009922 1.7e-07 58.9 45 62.2
Ciclev10033256m.g Citrus clementina HOM05D007881 ORTHO05D009922 1.7e-07 58.9 66 48.5
THA.LOC109117253 Tarenaya hassleriana HOM05D007881 ORTHO05D009922 1.7e-07 58.9 73 42.5
Aqoxy3G03631 Aquilegia oxysepala HOM05D007881 ORTHO05D009922 2.2e-07 58.5 42 66.7
A08p36200 Brassica napus HOM05D007881 ORTHO05D009922 2.2e-07 58.5 66 43.9
BcaC07g36818 Brassica carinata HOM05D007881 ORTHO05D009922 2.9e-07 58.2 66 42.4
Lsat_1_v5_gn_1_127981 Lactuca sativa HOM05D007881 ORTHO05D009922 2.9e-07 58.2 53 52.8
Phvul.005G031800 Phaseolus vulgaris HOM05D007881 ORTHO05D009922 3.8e-07 57.8 45 62.2
BolC8t47025H Brassica oleracea HOM05D007881 ORTHO05D009922 4.9e-07 57.4 66 42.4
CiPaw.07G080900 Carya illinoinensis HOM05D007881 ORTHO05D009922 4.9e-07 57.4 67 47.8
Medtr3g032520 Medicago truncatula HOM05D007881 ORTHO05D009922 4.9e-07 57.4 39 61.5
Nitab4.5_0001435g0080 Nicotiana tabacum HOM05D007881 ORTHO05D009922 4.9e-07 57.4 67 44.8
BraA08t35524Z Brassica rapa HOM05D007881 ORTHO05D009922 6.5e-07 57.0 42 59.5
Prupe.6G361800 Prunus persica HOM05D007881 ORTHO05D009922 6.5e-07 57.0 72 47.2
MD12G1086700 Malus domestica HOM05D007881 ORTHO05D009922 8.4e-07 56.6 42 64.3
PGR119G1449 Punica granatum HOM05D007881 ORTHO05D009922 8.4e-07 56.6 42 61.9
Atru.chr6.1889 Acer truncatum HOM05D007881 ORTHO05D009922 1.1e-06 56.2 42 57.1
Peaxi162Scf00048g00055 Petunia axillaris HOM05D007881 ORTHO05D009922 1.1e-06 56.2 63 44.4
Psat5g210160 Pisum sativum HOM05D007881 ORTHO05D009922 1.1e-06 56.2 39 61.5
Sp1g04830 Schrenkiella parvula HOM05D007881 ORTHO05D009922 1.1e-06 56.2 69 42.0
CAN.G217.11 Capsicum annuum HOM05D007881 ORTHO05D009922 1.4e-06 55.8 42 59.5
Cpa.g.sc9.142 Carica papaya HOM05D007881 ORTHO05D009922 1.4e-06 55.8 42 59.5
Glyma.11G151200 Glycine max HOM05D007881 ORTHO05D009922 1.4e-06 55.8 38 68.4
HanXRQChr16g0510911 Helianthus annuus HOM05D007881 ORTHO05D009922 1.4e-06 55.8 40 62.5
Nitab4.5_0000083g0100 Nicotiana tabacum HOM05D007881 ORTHO05D009922 1.4e-06 55.8 42 59.5
RcHm_v2.0_Chr3g0447831 Rosa chinensis HOM05D007881 ORTHO05D009922 1.4e-06 55.8 40 62.5
C08p51460 Brassica napus HOM05D000559 ORTHO05D009922 1.9e-06 55.5 39 59.0
BolC8t52672H Brassica oleracea HOM05D007881 ORTHO05D009922 1.9e-06 55.5 39 59.0
DCAR_007684 Daucus carota HOM05D007881 ORTHO05D009922 1.9e-06 55.5 36 66.7
FAN02G0717 Fragaria x ananassa HOM05D007881 ORTHO05D009922 1.9e-06 55.5 52 53.8
Nn7g37671 Nelumbo nucifera HOM05D007881 ORTHO05D009922 1.9e-06 55.5 63 47.6
QL12p018644 Quercus lobata HOM05D007881 ORTHO05D009922 1.9e-06 55.5 73 41.1
Thhalv10009243m.g Eutrema salsugineum HOM05D007881 ORTHO05D009922 2.5e-06 55.1 45 51.1
FvH4_6g00460 Fragaria vesca HOM05D007881 ORTHO05D009922 2.5e-06 55.1 40 62.5
MD04G1245200 Malus domestica HOM05D007881 ORTHO05D009922 2.5e-06 55.1 42 61.9
Sc16g0010420 Simmondsia chinensis HOM05D003813 ORTHO05D004557 2.5e-06 55.1 67 44.8
arahy.Tifrunner.gnm1.ann1.FG2V1D Arachis hypogaea HOM05D007881 ORTHO05D009922 3.2e-06 54.7 42 66.7
A09p67190 Brassica napus HOM05D007881 ORTHO05D009922 3.2e-06 54.7 63 44.4
CARHR005530 Cardamine hirsuta HOM05D007881 ORTHO05D009922 3.2e-06 54.7 63 41.3
FAN09G3126 Fragaria x ananassa HOM05D007881 ORTHO05D009922 3.2e-06 54.7 40 62.5
Lalb_Chr25g0282841 Lupinus albus HOM05D007881 ORTHO05D009922 3.2e-06 54.7 65 44.6
BcaC07g42091 Brassica carinata HOM05D007881 ORTHO05D009922 4.2e-06 54.3 67 40.3
COL.COLO4_38031 Corchorus olitorius HOM05D007881 ORTHO05D009922 4.2e-06 54.3 66 45.5
AL1G15960 Arabidopsis lyrata HOM05D007881 ORTHO05D009922 5.5e-06 53.9 64 39.1
Potri.012G134200 Populus trichocarpa HOM05D007881 ORTHO05D009922 5.5e-06 53.9 42 54.8
GSVIVG01019086001 Vitis vinifera HOM05D007881 ORTHO05D009922 5.5e-06 53.9 69 44.9
AT1G06010 Arabidopsis thaliana HOM05D007881 ORTHO05D009922 7.1e-06 53.5 64 39.1
AUR62000305 Chenopodium quinoa HOM05D007881 ORTHO05D009922 7.1e-06 53.5 41 56.1
AUR62006650 Chenopodium quinoa HOM05D007881 ORTHO05D009922 7.1e-06 53.5 41 56.1
CsaV3_1G044490 Cucumis sativus L. HOM05D007881 ORTHO05D009922 7.1e-06 53.5 40 57.5
MELO3C010052.2 Cucumis melo HOM05D007881 ORTHO05D009922 9.3e-06 53.1 40 57.5
Gohir.A05G392600 Gossypium hirsutum HOM05D007881 ORTHO05D009922 9.3e-06 53.1 43 58.1
Gohir.D04G024500 Gossypium hirsutum HOM05D007881 ORTHO05D009922 9.3e-06 53.1 43 58.1
Gorai.012G027000 Gossypium raimondii HOM05D007881 ORTHO05D009922 9.3e-06 53.1 43 58.1
Psat5g211080 Pisum sativum HOM05D007881 ORTHO05D009922 9.3e-06 53.1 39 56.4
Potri.015G136500 Populus trichocarpa HOM05D007881 ORTHO05D009922 9.3e-06 53.1 42 54.8
Solyc04g056425.1 Solanum lycopersicum HOM05D007881 ORTHO05D009922 9.3e-06 53.1 67 40.3
Sopen04g025320 Solanum pennellii HOM05D000039 ORTHO05D000366 9.3e-06 53.1 67 40.3


User provided reference genes

Program Settings