Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1631 Ceratophyllum demersum HOM05D004175 ORTHO05D004664 1.7e-121 439.9 330 100.0
PSO210G6864 Papaver somniferum HOM05D004175 ORTHO05D004664 7.4e-80 301.6 325 68.9
PSO210G7624 Papaver somniferum HOM05D004175 ORTHO05D004664 9.7e-80 301.2 325 72.9
TAR383G0226 Trochodendron aralioides HOM05D004175 ORTHO05D004664 3.7e-79 299.3 322 71.1
CiPaw.03G226400 Carya illinoinensis HOM05D004175 ORTHO05D004664 6.3e-79 298.5 323 76.8
Thecc.09G102700 Theobroma cacao HOM05D004175 ORTHO05D004664 1.4e-78 297.4 327 77.4
Gohir.A13G195800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 4.1e-78 295.8 330 75.2
Nn2g11614 Nelumbo nucifera HOM05D004175 ORTHO05D004664 3.4e-77 292.7 315 77.8
Gohir.D13G201000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 4.5e-77 292.4 330 75.2
Dinv36699 Davidia involucrata HOM05D004175 ORTHO05D004664 5.9e-77 292.0 318 73.6
BraA10t44078Z Brassica rapa HOM05D004175 ORTHO05D004664 7.7e-77 291.6 323 69.7
Thhalv10014089m.g Eutrema salsugineum HOM05D004175 ORTHO05D004664 7.7e-77 291.6 316 69.9
HanXRQChr10g0318361 Helianthus annuus HOM05D004175 ORTHO05D004664 7.7e-77 291.6 318 75.2
A10p20040 Brassica napus HOM05D004175 ORTHO05D004664 1.7e-76 290.4 323 69.7
BolC9t58515H Brassica oleracea HOM05D004175 ORTHO05D004664 1.7e-76 290.4 323 69.0
Ciclev10008855m.g Citrus clementina HOM05D004175 ORTHO05D004664 1.7e-76 290.4 326 69.0
Carub.0006s1803 Capsella rubella HOM05D004175 ORTHO05D004664 5.0e-76 288.9 323 69.0
Duzib187G1630 Durio zibethinus HOM05D004175 ORTHO05D004664 5.0e-76 288.9 326 76.1
THA.LOC104811087 Tarenaya hassleriana HOM05D004175 ORTHO05D004664 5.0e-76 288.9 323 75.9
BcaC04g19365 Brassica carinata HOM05D004175 ORTHO05D004664 1.9e-75 287.0 323 69.0
C09p56500 Brassica napus HOM05D004175 ORTHO05D004664 1.9e-75 287.0 323 69.0
Sp6g24700 Schrenkiella parvula HOM05D004175 ORTHO05D004664 2.5e-75 286.6 316 74.4
GSVIVG01015319001 Vitis vinifera HOM05D004175 ORTHO05D004664 2.5e-75 286.6 329 76.3
BcaC03g13699 Brassica carinata HOM05D004175 ORTHO05D004664 3.2e-75 286.2 316 75.6
Sopen05g014800 Solanum pennellii HOM05D004175 ORTHO05D004664 3.2e-75 286.2 329 67.8
vmacro10860 Vaccinium macrocarpon HOM05D004175 ORTHO05D004664 3.2e-75 286.2 307 78.5
Aqoxy7G03896 Aquilegia oxysepala HOM05D004175 ORTHO05D004664 4.2e-75 285.8 318 67.3
Prupe.7G222100 Prunus persica HOM05D004175 ORTHO05D004664 4.2e-75 285.8 328 66.2
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus HOM05D004175 ORTHO05D004664 9.4e-75 284.6 316 69.0
Cc06_g10300 Coffea canephora HOM05D004175 ORTHO05D004664 9.4e-75 284.6 310 69.7
Actinidia09442 Actinidia chinensis HOM05D001936 ORTHO05D002296 1.2e-74 284.3 314 77.4
AT5G19680 Arabidopsis thaliana HOM05D004175 ORTHO05D004664 1.2e-74 284.3 324 68.5
Solyc05g018150.3 Solanum lycopersicum HOM05D004175 ORTHO05D004664 2.1e-74 283.5 329 67.8
A02p05730 Brassica napus HOM05D004175 ORTHO05D004664 2.7e-74 283.1 316 74.7
BraA02t05525Z Brassica rapa HOM05D004175 ORTHO05D004664 2.7e-74 283.1 316 74.7
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 2.7e-74 283.1 303 72.6
Peaxi162Scf00001g00131 Petunia axillaris HOM05D004175 ORTHO05D004664 2.7e-74 283.1 310 71.9
Hund09241 Selenicereus undatus HOM05D004175 ORTHO05D004664 2.7e-74 283.1 326 58.9
BcaB05g23410 Brassica carinata HOM05D004175 ORTHO05D004664 4.7e-74 282.3 322 68.9
CSS0007429 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 6.1e-74 282.0 328 65.9
CSS0045871 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 6.1e-74 282.0 328 65.9
CANSAT56G2035 Cannabis sativa HOM05D004175 ORTHO05D004664 7.9e-74 281.6 320 67.2
Gohir.D06G065000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 7.9e-74 281.6 330 70.6
AL6G31190 Arabidopsis lyrata HOM05D004175 ORTHO05D004664 1.0e-73 281.2 324 68.5
Manes.16G110500 Manihot esculenta HOM05D004175 ORTHO05D004664 1.4e-73 280.8 316 76.9
Lsat_1_v5_gn_5_143861 Lactuca sativa HOM05D004175 ORTHO05D004664 1.8e-73 280.4 330 69.1
Ah.14g083210 Amaranthus hybridus HOM05D004175 ORTHO05D004664 2.3e-73 280.0 318 75.8
Gohir.A06G066500 Gossypium hirsutum HOM05D004175 ORTHO05D004664 3.0e-73 279.6 330 71.5
Atru.chr7.1440 Acer truncatum HOM05D004175 ORTHO05D004664 3.9e-73 279.3 314 70.4
FAN26G0873 Fragaria x ananassa HOM05D004175 ORTHO05D004664 6.7e-73 278.5 318 74.2
FAN26G2762 Fragaria x ananassa HOM05D004175 ORTHO05D004664 6.7e-73 278.5 318 74.2
Oeu000358.1 Olea europaea HOM05D004175 ORTHO05D004664 6.7e-73 278.5 310 75.5
Glyma.08G034700 Glycine max HOM05D004175 ORTHO05D004664 8.8e-73 278.1 319 67.4
Aa31LG1G8760 Aethionema arabicum HOM05D004175 ORTHO05D004664 1.1e-72 277.7 327 72.5
FvH4_1g05880 Fragaria vesca HOM05D004175 ORTHO05D004664 1.5e-72 277.3 318 74.2
VMungo0251G2778 Vigna mungo HOM05D004175 ORTHO05D004664 1.5e-72 277.3 320 60.9
CAN.G274.4 Capsicum annuum HOM05D004175 ORTHO05D004664 2.6e-72 276.6 317 65.3
FAN28G2614 Fragaria x ananassa HOM05D004175 ORTHO05D004664 3.3e-72 276.2 318 73.3
CARHR193230 Cardamine hirsuta HOM05D004175 ORTHO05D004664 7.4e-72 275.0 323 67.5
DCAR_012049 Daucus carota HOM05D004175 ORTHO05D004664 7.4e-72 275.0 318 67.9
FAN23G2598 Fragaria x ananassa HOM05D004175 ORTHO05D004664 9.7e-72 274.6 318 73.6
CAN.G525.1 Capsicum annuum HOM05D004175 ORTHO05D004664 1.3e-71 274.2 317 73.8
Medtr8g102770 Medicago truncatula HOM05D004175 ORTHO05D004664 1.3e-71 274.2 330 57.9
Oeu017825.1 Olea europaea HOM05D004175 ORTHO05D004664 1.3e-71 274.2 327 74.9
MD15G1194400 Malus domestica HOM05D004175 ORTHO05D004664 1.7e-71 273.9 318 70.1
TWI32G1108 Tripterygium wilfordii HOM05D004175 ORTHO05D004664 1.7e-71 273.9 334 68.0
Os02g0230100 Oryza sativa ssp. japonica HOM05D004175 ORTHO05D004664 2.8e-71 273.1 317 74.8
ECA234G4006 Erigeron canadensis HOM05D004175 ORTHO05D004664 4.8e-71 272.3 307 77.5
Lj3g0019618 Lotus japonicus HOM05D004175 ORTHO05D004664 6.3e-71 271.9 310 64.5
ATR0705G211 Amborella trichopoda HOM05D004175 ORTHO05D004664 1.4e-70 270.8 318 72.0
CsaV3_2G001990 Cucumis sativus L. HOM05D004175 ORTHO05D004664 1.4e-70 270.8 329 72.0
Sed0003540 Sechium edule HOM05D004175 ORTHO05D004664 1.4e-70 270.8 325 72.9
SGA_v2.0_scaffold10G05161 Striga asiatica HOM05D004175 ORTHO05D004664 1.4e-70 270.8 309 70.6
Zm00001eb204970 Zea mays HOM05D004175 ORTHO05D004664 1.4e-70 270.8 310 74.5
Haze_25808 Corylus avellana HOM05D004175 ORTHO05D004664 1.8e-70 270.4 318 64.2
Nn8g39121 Nelumbo nucifera HOM05D004175 ORTHO05D004664 5.3e-70 268.9 297 77.4
MELO3C004581.2 Cucumis melo HOM05D004175 ORTHO05D004664 7.0e-70 268.5 329 71.7
MD02G1060900 Malus domestica HOM05D004175 ORTHO05D004664 2.0e-69 266.9 318 64.5
Migut.J01107 Erythranthe guttata HOM05D004175 ORTHO05D004664 3.5e-69 266.2 310 75.2
Cpa.g.sc40.51 Carica papaya HOM05D004175 ORTHO05D004664 4.5e-69 265.8 302 78.8
Cfa003199 Carpinus fangiana HOM05D004175 ORTHO05D004664 5.9e-69 265.4 318 66.0
Eucgr.C03782 Eucalyptus grandis HOM05D004175 ORTHO05D004664 7.7e-69 265.0 318 69.2
SGA_v2.0_scaffold62G21556 Striga asiatica HOM05D004175 ORTHO05D004664 1.0e-68 264.6 327 64.8
Psat7g016360 Pisum sativum HOM05D004175 ORTHO05D004664 1.7e-68 263.8 334 65.9
Glyma.05G227700 Glycine max HOM05D004175 ORTHO05D004664 2.9e-68 263.1 319 65.2
Sc08g0007900 Simmondsia chinensis HOM05D004175 ORTHO05D004664 5.0e-68 262.3 326 65.6
ClCG11G002240 Citrullus lanatus HOM05D004175 ORTHO05D004664 1.1e-67 261.2 356 54.2
Lalb_Chr05g0223141 Lupinus albus HOM05D004175 ORTHO05D004664 1.5e-67 260.8 325 61.2
MBI04_g40471_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 1.9e-67 260.4 306 77.8
Gorai.010G076100 Gossypium raimondii HOM05D004175 ORTHO05D004664 4.2e-67 259.2 330 67.3
MSTRG.6019 Avicennia marina HOM05D004175 ORTHO05D004664 1.2e-66 257.7 310 74.2
Gorai.013G229800 Gossypium raimondii HOM05D004175 ORTHO05D004664 1.0e-65 254.6 304 76.0
Phvul.002G310000 Phaseolus vulgaris HOM05D004175 ORTHO05D004664 5.2e-65 252.3 320 59.7
Sabra18G0074500 Salix brachista HOM05D004175 ORTHO05D004664 1.5e-64 250.8 289 79.6
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea HOM05D004175 ORTHO05D004664 4.4e-64 249.2 337 60.2
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea HOM05D004175 ORTHO05D004664 4.4e-64 249.2 337 61.7
BcaC04g19363 Brassica carinata HOM05D004175 ORTHO05D004664 4.4e-64 249.2 296 67.6
Potri.018G086200 Populus trichocarpa HOM05D004175 ORTHO05D004664 4.4e-64 249.2 291 78.4
Potri.006G163900 Populus trichocarpa HOM05D004175 ORTHO05D004664 7.4e-64 248.4 316 70.6
Ca_17354_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 1.7e-63 247.3 313 59.1
Ca_29618_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 1.7e-63 247.3 313 59.1
RcHm_v2.0_Chr2g0091621 Rosa chinensis HOM05D004175 ORTHO05D004664 1.2e-61 241.1 293 77.1
BcaC04g19364 Brassica carinata HOM05D004175 ORTHO05D004664 2.0e-61 240.4 233 68.2
ECA247G2452 Erigeron canadensis HOM05D004175 ORTHO05D004664 5.9e-61 238.8 290 69.3
SHI11434 Sapria himalayana HOM05D004175 ORTHO05D004664 2.7e-58 229.9 352 51.1
Hund26252 Selenicereus undatus HOM05D004175 ORTHO05D004664 8.0e-58 228.4 310 63.9
Duzib168G0201 Durio zibethinus HOM05D004175 ORTHO05D004664 1.4e-57 227.6 252 63.9
RcHm_v2.0_Chr2g0091541 Rosa chinensis HOM05D004175 ORTHO05D004664 9.8e-56 221.5 303 67.3
C02p31840 Brassica napus HOM05D004175 ORTHO05D004664 1.3e-55 221.1 217 78.8
BolC2t08664H Brassica oleracea HOM05D004175 ORTHO05D004664 1.7e-55 220.7 216 66.7
QL02p042164 Quercus lobata HOM05D004175 ORTHO05D004664 2.8e-55 219.9 309 55.3
BcaC01g02078 Brassica carinata HOM05D004175 ORTHO05D004664 1.8e-54 217.2 217 60.8
COL.COLO4_34774 Corchorus olitorius HOM05D004175 ORTHO05D004664 1.3e-52 211.1 144 73.6
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.3e-52 211.1 318 56.3
C09p49510 Brassica napus HOM05D004175 ORTHO05D004664 7.2e-51 205.3 174 73.0
C07p36980 Brassica napus HOM05D004175 ORTHO05D004664 1.2e-50 204.5 174 72.4
Rhsim05G0041300 Rhododendron simsii HOM05D004175 ORTHO05D004664 4.7e-50 202.6 293 55.3
C05p31230 Brassica napus HOM05D004175 ORTHO05D004664 4.0e-49 199.5 174 60.3
C03p72980 Brassica napus HOM05D004175 ORTHO05D004664 5.2e-49 199.1 174 60.3
SEGI_33191 Sequoiadendron giganteum HOM05D004175 ORTHO05D004664 4.4e-48 196.1 326 58.0
TPR.G23501 Trifolium pratense HOM05D004175 ORTHO05D004664 4.9e-47 192.6 328 51.2
SMO337G0008 Selaginella moellendorffii HOM05D004175 ORTHO05D004664 6.3e-47 192.2 308 66.2
Mapoly0051s0012 Marchantia polymorpha HOM05D004175 ORTHO05D004664 1.8e-46 190.7 306 59.2
Lalb_Chr09g0331471 Lupinus albus HOM05D004175 ORTHO05D004664 4.1e-46 189.5 295 59.0
C03p57560 Brassica napus HOM05D004175 ORTHO05D004664 5.4e-46 189.1 174 66.1
unitig_26.g8970 Utricularia gibba HOM05D004175 ORTHO05D004664 9.1e-46 188.3 320 57.8
BcaC06g33783 Brassica carinata HOM05D004175 ORTHO05D004664 8.6e-44 181.8 183 77.0
BolC3t18031H Brassica oleracea HOM05D004175 ORTHO05D004664 8.6e-44 181.8 134 70.1
EL10Ac8g18403 Beta vulgaris HOM05D004175 ORTHO05D004664 9.5e-43 178.3 303 59.7
Pp3c1_38690 Physcomitrium patens HOM05D004175 ORTHO05D004664 5.2e-41 172.6 308 50.6
MBI04_g06580_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 1.5e-40 171.0 139 67.6
BcaC03g15042 Brassica carinata HOM05D004175 ORTHO05D004664 7.0e-38 162.2 185 63.2
C04p04320 Brassica napus HOM05D004175 ORTHO05D004664 7.0e-38 162.2 185 58.4
Nitab4.5_0000012g0030 Nicotiana tabacum HOM05D004175 ORTHO05D004664 7.0e-38 162.2 144 59.7
AagrBONN_evm.TU.Sc2ySwM_117.1201 Anthoceros agrestis HOM05D004175 ORTHO05D004664 2.0e-37 160.6 312 48.7
BolC7t44210H Brassica oleracea HOM05D004175 ORTHO05D004664 2.0e-37 160.6 113 70.8
C01p01530 Brassica napus HOM05D004175 ORTHO05D004664 3.5e-37 159.8 148 59.5
CBR_g36965 Chara braunii HOM05D004175 ORTHO05D004664 5.9e-37 159.1 320 55.9
Lj7A662T62 Lonicera japonica HOM05D004175 ORTHO05D004664 2.3e-36 157.1 213 83.1
Nitab4.5_0003199g0020 Nicotiana tabacum HOM05D004175 ORTHO05D004664 4.3e-35 152.9 113 67.3
BcaC01g02978 Brassica carinata HOM05D004175 ORTHO05D004664 1.2e-34 151.4 217 50.7
Pp3c2_9120 Physcomitrium patens HOM05D004175 ORTHO05D004664 4.0e-33 146.4 321 43.6
Gorai.001G184800 Gossypium raimondii HOM05D004175 ORTHO05D004664 4.9e-31 139.4 156 58.3
BolC3t19136H Brassica oleracea HOM05D004175 ORTHO05D004664 6.4e-31 139.0 152 60.5
Gorai.009G408400 Gossypium raimondii HOM05D004175 ORTHO05D004664 1.7e-28 131.0 207 73.9
Glyma.08G276800 Glycine max HOM05D004175 ORTHO05D004664 3.3e-27 126.7 153 51.6
A07p01400 Brassica napus HOM05D004175 ORTHO05D004664 7.3e-27 125.6 157 59.2
MD03G1179500 Malus domestica HOM05D004175 ORTHO05D004664 7.3e-27 125.6 151 53.0
BraA03t14262Z Brassica rapa HOM05D004175 ORTHO05D004664 4.7e-26 122.9 151 66.2
Cre05.g234655 Chlamydomonas reinhardtii HOM05D004175 ORTHO05D004664 8.6e-20 102.1 144 44.4
Gohir.D04G104800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.2e-18 98.2 183 68.9
FAN10G1780 Fragaria x ananassa HOM05D004175 ORTHO05D004664 8.1e-18 95.5 84 58.3
FAN10G3383 Fragaria x ananassa HOM05D004175 ORTHO05D004664 8.1e-18 95.5 84 58.3
FAN10G3778 Fragaria x ananassa HOM05D004175 ORTHO05D004664 5.2e-17 92.8 84 57.1
FAN10G2625 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.4e-14 84.0 77 57.1
COL.COLO4_34775 Corchorus olitorius HOM05D004175 ORTHO05D004664 7.1e-14 82.4 96 47.9
PRCOL_00004941 Prasinoderma coloniale HOM05D004175 ORTHO05D004664 8.6e-12 75.5 170 35.3
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 3.3e-11 73.6 66 57.6
FAN28G1141 Fragaria x ananassa HOM05D004175 ORTHO05D004664 4.3e-11 73.2 77 51.9
BolC9t58072H Brassica oleracea HOM05D004175 ORTHO05D004664 7.3e-11 72.4 96 42.7
FvH4_5g23601 Fragaria vesca HOM05D004175 ORTHO05D045656 7.3e-11 72.4 66 57.6
C09p52070 Brassica napus HOM05D004175 ORTHO05D004664 1.8e-09 67.8 102 40.2
FAN20G2587 Fragaria x ananassa HOM05D000366 ORTHO05D000437 1.2e-08 65.1 61 55.7
FvH4_3g18060 Fragaria vesca HOM05D004175 ORTHO05D004664 7.6e-08 62.4 47 61.7
HPP92_002875 Vanilla planifolia HOM05D004175 ORTHO05D004664 4.2e-06 56.6 83 39.8
MBI04_g44954_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 7.1e-06 55.8 159 53.5


User provided reference genes

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