Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1627 Ceratophyllum demersum HOM05D016689 ORTHO05D043916 2.8e-167 592.0 314 100.0
CDE02G1007 Ceratophyllum demersum HOM05D016689 ORTHO05D043916 1.2e-64 251.1 135 94.1
CDE08G0100 Ceratophyllum demersum HOM05D016689 ORTHO05D010071 4.8e-26 122.9 131 68.7
CDE02G0819 Ceratophyllum demersum HOM05D016689 ORTHO05D010071 5.0e-23 112.8 116 73.3
TAR623G0760 Trochodendron aralioides HOM05D001312 ORTHO05D001832 1.8e-12 77.8 113 36.3
Nn7g36465 Nelumbo nucifera HOM05D001312 ORTHO05D001832 6.8e-12 75.9 119 36.1
PSO339G2353 Papaver somniferum HOM05D001312 ORTHO05D001832 6.8e-12 75.9 79 48.1
PSO384G1094 Papaver somniferum HOM05D001312 ORTHO05D001832 6.8e-12 75.9 79 48.1
Hma1.2p1_1920F.1_g307540 Hydrangea macrophylla HOM05D001312 ORTHO05D001832 2.2e-10 70.9 118 33.9
AUR62000168 Chenopodium quinoa HOM05D001312 ORTHO05D001832 6.3e-10 69.3 98 37.8
Manes.06G161100 Manihot esculenta HOM05D001312 ORTHO05D001832 8.3e-10 68.9 128 32.8
Sabra09G0035800 Salix brachista HOM05D001312 ORTHO05D001832 8.3e-10 68.9 130 34.6
AUR62039843 Chenopodium quinoa HOM05D001312 ORTHO05D001832 1.4e-09 68.2 98 37.8
Hund21993 Selenicereus undatus HOM05D001312 ORTHO05D001832 2.4e-09 67.4 90 40.0
Gohir.A07G122400 Gossypium hirsutum HOM05D001312 ORTHO05D001832 5.4e-09 66.2 118 37.3
Gohir.D07G126400 Gossypium hirsutum HOM05D001312 ORTHO05D001832 9.1e-09 65.5 118 36.4
CiPaw.13G153400 Carya illinoinensis HOM05D001312 ORTHO05D001832 1.2e-08 65.1 118 35.6
Manes.14G005800 Manihot esculenta HOM05D001312 ORTHO05D001832 1.2e-08 65.1 172 30.2
Prupe.4G257200 Prunus persica HOM05D001312 ORTHO05D001832 1.6e-08 64.7 118 36.4
MD11G1187100 Malus domestica HOM05D001312 ORTHO05D001832 2.7e-08 63.9 116 33.6
TWI39G0267 Tripterygium wilfordii HOM05D001312 ORTHO05D001832 2.7e-08 63.9 118 32.2
Gohir.A07G122300 Gossypium hirsutum HOM05D001312 ORTHO05D001832 3.5e-08 63.5 118 35.6
Thecc.09G241500 Theobroma cacao HOM05D001312 ORTHO05D001832 5.9e-08 62.8 130 32.3
Gorai.001G136300 Gossypium raimondii HOM05D001312 ORTHO05D001832 7.7e-08 62.4 118 35.6
Gohir.D07G126500 Gossypium hirsutum HOM05D001312 ORTHO05D001832 1.3e-07 61.6 118 35.6
Ah.06g194370 Amaranthus hybridus HOM05D001312 ORTHO05D001832 2.2e-07 60.8 120 30.8
Cc01_g05990 Coffea canephora HOM05D001312 ORTHO05D001832 2.9e-07 60.5 118 36.4
CAN.G992.22 Capsicum annuum HOM05D016597 ORTHO05D018539 3.8e-07 60.1 62 59.7
Gorai.001G136400 Gossypium raimondii HOM05D001312 ORTHO05D001832 3.8e-07 60.1 118 34.7
HanXRQChr07g0198711 Helianthus annuus HOM05D013051 ORTHO05D010071 3.8e-07 60.1 68 57.4
ClCG03G012960 Citrullus lanatus HOM05D001312 ORTHO05D001832 8.5e-07 58.9 126 34.1
Hma1.2p1_0353F.1_g133180 Hydrangea macrophylla HOM05D008698 ORTHO05D010072 1.1e-06 58.5 56 66.1
MD03G1169900 Malus domestica HOM05D001312 ORTHO05D001832 1.1e-06 58.5 116 32.8
SEGI_08770 Sequoiadendron giganteum HOM05D001312 ORTHO05D001832 1.1e-06 58.5 115 34.8
EL10Ac4g10179 Beta vulgaris HOM05D001312 ORTHO05D001832 1.5e-06 58.2 122 29.5
Dinv22150 Davidia involucrata HOM05D001312 ORTHO05D001832 1.9e-06 57.8 130 33.1
Haze_23185 Corylus avellana HOM05D001312 ORTHO05D001832 2.5e-06 57.4 121 32.2
Potri.001G254300 Populus trichocarpa HOM05D001312 ORTHO05D001832 2.5e-06 57.4 129 30.2
Actinidia01252 Actinidia chinensis HOM05D016621 ORTHO05D010071 4.2e-06 56.6 63 55.6
CiPaw.14G115800 Carya illinoinensis HOM05D001312 ORTHO05D001832 4.2e-06 56.6 118 33.9
CDE06G0640 Ceratophyllum demersum HOM05D016689 ORTHO05D010071 4.2e-06 56.6 103 54.4
Rhsim13G0217000 Rhododendron simsii HOM05D001312 ORTHO05D001832 4.2e-06 56.6 121 33.1
Sabra16G0155000 Salix brachista HOM05D001312 ORTHO05D001832 4.2e-06 56.6 129 30.2
Cfa009825 Carpinus fangiana HOM05D001312 ORTHO05D001832 5.5e-06 56.2 118 33.9
CSS0034120 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D001832 7.2e-06 55.8 112 32.1
TWI23G1095 Tripterygium wilfordii HOM05D001312 ORTHO05D001832 9.5e-06 55.5 118 31.4


User provided reference genes

Program Settings