Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1591 Ceratophyllum demersum HOM05D006883 ORTHO05D008624 8.8e-221 770.0 393 100.0
CDE11G0693 Ceratophyllum demersum HOM05D006883 ORTHO05D008624 8.5e-192 673.7 386 90.7
Aqoxy2G03105 Aquilegia oxysepala HOM05D006883 ORTHO05D008624 1.4e-157 560.1 421 71.3
arahy.Tifrunner.gnm1.ann1.WI0ZBZ Arachis hypogaea HOM05D006883 ORTHO05D008624 4.4e-156 555.1 409 71.6
arahy.Tifrunner.gnm1.ann1.GN2N7N Arachis hypogaea HOM05D006883 ORTHO05D008624 3.8e-155 552.0 409 71.1
CiPaw.02G086300 Carya illinoinensis HOM05D006883 ORTHO05D008624 1.9e-154 549.7 395 72.7
Sabra08G0157100 Salix brachista HOM05D006883 ORTHO05D008624 4.1e-154 548.5 392 72.4
Cfa015347 Carpinus fangiana HOM05D006883 ORTHO05D008624 1.2e-153 547.0 410 70.7
Ciclev10005043m.g Citrus clementina HOM05D006883 ORTHO05D008624 1.6e-153 546.6 355 77.7
Potri.008G204900 Populus trichocarpa HOM05D006883 ORTHO05D008624 2.1e-153 546.2 392 71.9
Manes.15G016500 Manihot esculenta HOM05D006883 ORTHO05D008624 4.6e-153 545.0 412 70.4
vmacro08200 Vaccinium macrocarpon HOM05D006883 ORTHO05D008624 1.0e-152 543.9 412 69.4
Haze_01264 Corylus avellana HOM05D006883 ORTHO05D008624 1.3e-152 543.5 410 70.2
QL06p007513 Quercus lobata HOM05D006883 ORTHO05D008624 1.3e-152 543.5 406 70.4
TAR633G1607 Trochodendron aralioides HOM05D006883 ORTHO05D008624 1.5e-151 540.0 398 69.8
Actinidia40226 Actinidia chinensis HOM05D006883 ORTHO05D008624 4.3e-151 538.5 390 71.5
Nitab4.5_0000829g0010 Nicotiana tabacum HOM05D006883 ORTHO05D008624 5.6e-151 538.1 389 71.5
Gorai.011G186200 Gossypium raimondii HOM05D006883 ORTHO05D008624 7.3e-151 537.7 345 79.1
CSS0008645 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 9.6e-151 537.3 380 72.4
DCAR_030562 Daucus carota HOM05D006883 ORTHO05D008624 2.1e-150 536.2 409 68.9
Gohir.A10G101275 Gossypium hirsutum HOM05D006883 ORTHO05D008624 2.1e-150 536.2 392 72.4
Nn4g26002 Nelumbo nucifera HOM05D006883 ORTHO05D008624 2.1e-150 536.2 388 71.9
Rhsim04G0216600 Rhododendron simsii HOM05D006883 ORTHO05D008624 2.1e-150 536.2 421 67.9
Sopen01g029090 Solanum pennellii HOM05D006883 ORTHO05D008624 2.1e-150 536.2 392 70.9
COL.COLO4_13924 Corchorus olitorius HOM05D006883 ORTHO05D008624 2.8e-150 535.8 408 71.1
PGSC0003DMG400022678 Solanum tuberosum HOM05D006883 ORTHO05D008624 2.8e-150 535.8 392 70.7
CAN.G556.8 Capsicum annuum HOM05D006883 ORTHO05D008624 6.2e-150 534.6 422 68.5
Eucgr.H03771 Eucalyptus grandis HOM05D006883 ORTHO05D008624 6.2e-150 534.6 394 70.8
Lj6P670T41 Lonicera japonica HOM05D006883 ORTHO05D008624 6.2e-150 534.6 410 69.0
Lalb_Chr15g0087031 Lupinus albus HOM05D006883 ORTHO05D008624 8.1e-150 534.3 350 76.9
Nitab4.5_0002986g0100 Nicotiana tabacum HOM05D006883 ORTHO05D008624 1.1e-149 533.9 389 71.0
Thecc.04G278100 Theobroma cacao HOM05D006883 ORTHO05D008624 1.4e-149 533.5 392 71.9
TWI53G1857 Tripterygium wilfordii HOM05D006883 ORTHO05D008624 3.1e-149 532.3 381 71.7
Actinidia23426 Actinidia chinensis HOM05D006883 ORTHO05D008624 6.9e-149 531.2 385 71.2
TWI53G0676 Tripterygium wilfordii HOM05D006883 ORTHO05D008624 6.9e-149 531.2 381 71.7
Psat1g187280 Pisum sativum HOM05D006883 ORTHO05D008624 8.9e-149 530.8 404 69.6
Lalb_Chr18g0055701 Lupinus albus HOM05D006883 ORTHO05D008624 1.5e-148 530.0 411 69.8
CANSAT78G0922 Cannabis sativa HOM05D006883 ORTHO05D008624 3.4e-148 528.9 354 76.0
Peaxi162Scf00386g00096 Petunia axillaris HOM05D006883 ORTHO05D008624 3.4e-148 528.9 362 73.8
Glyma.15G097700 Glycine max HOM05D006883 ORTHO05D008624 1.3e-147 526.9 407 68.3
Phvul.006G161600 Phaseolus vulgaris HOM05D006883 ORTHO05D008624 1.3e-147 526.9 408 68.9
HanXRQChr08g0208101 Helianthus annuus HOM05D006883 ORTHO05D008624 1.7e-147 526.6 384 70.6
Sc25g0004770 Simmondsia chinensis HOM05D006883 ORTHO05D008624 1.7e-147 526.6 418 66.5
CsaV3_3G014130 Cucumis sativus L. HOM05D006883 ORTHO05D008624 2.2e-147 526.2 416 66.6
PSO170G0113 Papaver somniferum HOM05D006883 ORTHO05D008624 3.8e-147 525.4 393 69.0
Cc03_g02320 Coffea canephora HOM05D006883 ORTHO05D008624 6.4e-147 524.6 420 66.2
PSO210G3900 Papaver somniferum HOM05D006883 ORTHO05D008624 6.4e-147 524.6 417 65.7
Prupe.1G141800 Prunus persica HOM05D006883 ORTHO05D008624 6.4e-147 524.6 414 67.6
Sp6g25680 Schrenkiella parvula HOM05D006883 ORTHO05D008624 6.4e-147 524.6 391 69.8
Ca_00572_v3 Cicer arietinum L. HOM05D006883 ORTHO05D008624 8.4e-147 524.2 406 67.7
Duzib052G0675 Durio zibethinus HOM05D006883 ORTHO05D008624 8.4e-147 524.2 393 70.0
Thhalv10013668m.g Eutrema salsugineum HOM05D006883 ORTHO05D008624 8.4e-147 524.2 393 69.5
CARHR194360 Cardamine hirsuta HOM05D006883 ORTHO05D008624 1.1e-146 523.9 417 67.6
AL6G29930 Arabidopsis lyrata HOM05D006883 ORTHO05D008624 2.4e-146 522.7 393 69.5
Glyma.13G215400 Glycine max HOM05D006883 ORTHO05D008624 2.4e-146 522.7 350 76.3
RcHm_v2.0_Chr4g0421151 Rosa chinensis HOM05D006883 ORTHO05D008624 2.4e-146 522.7 344 76.7
FAN17G0491 Fragaria x ananassa HOM05D006883 ORTHO05D008624 4.2e-146 521.9 359 74.1
Sed0024317 Sechium edule HOM05D006883 ORTHO05D008624 4.2e-146 521.9 424 65.6
Aa31LG11G10960 Aethionema arabicum HOM05D006883 ORTHO05D008624 5.4e-146 521.5 388 69.8
Carub.0006s1695 Capsella rubella HOM05D006883 ORTHO05D008624 7.1e-146 521.2 393 69.2
FvH4_4g17240 Fragaria vesca HOM05D006883 ORTHO05D008624 7.1e-146 521.2 359 73.8
FAN12G0993 Fragaria x ananassa HOM05D006883 ORTHO05D008624 7.1e-146 521.2 359 74.1
FAN12G3260 Fragaria x ananassa HOM05D006883 ORTHO05D008624 7.1e-146 521.2 359 73.8
LjContig00389g0025618 Lotus japonicus HOM05D006883 ORTHO05D008624 1.2e-145 520.4 379 69.9
AT5G18660 Arabidopsis thaliana HOM05D006883 ORTHO05D008624 1.6e-145 520.0 393 69.2
AUR62041764 Chenopodium quinoa HOM05D006883 ORTHO05D008624 1.6e-145 520.0 407 69.3
PGR004G1631 Punica granatum HOM05D006883 ORTHO05D008624 1.6e-145 520.0 394 69.0
Atru.BG.87.p Acer truncatum HOM05D006883 ORTHO05D008624 2.1e-145 519.6 349 76.2
FAN22G2222 Fragaria x ananassa HOM05D006883 ORTHO05D008624 2.1e-145 519.6 386 69.4
THA.LOC104802726 Tarenaya hassleriana HOM05D006883 ORTHO05D008624 2.1e-145 519.6 347 74.6
MBI19_g30852_MAGBIO Magnolia biondii HOM05D006883 ORTHO05D008624 3.5e-145 518.8 353 73.4
SalBow2G1088 Salvia bowleyana HOM05D006883 ORTHO05D008624 1.7e-144 516.5 412 64.6
Medtr2g020160 Medicago truncatula HOM05D006883 ORTHO05D008624 3.0e-144 515.8 355 73.2
BcaB08g36654 Brassica carinata HOM05D006883 ORTHO05D008624 3.9e-144 515.4 378 69.6
BcaC04g18657 Brassica carinata HOM05D006883 ORTHO05D008624 5.1e-144 515.0 378 70.1
BolC9t58650H Brassica oleracea HOM05D006883 ORTHO05D008624 5.1e-144 515.0 378 70.1
AUR62041032 Chenopodium quinoa HOM05D006883 ORTHO05D008624 5.1e-144 515.0 407 68.3
MSTRG.10057 Avicennia marina HOM05D006883 ORTHO05D008624 6.6e-144 514.6 358 73.5
ATR0706G234 Amborella trichopoda HOM05D006883 ORTHO05D008624 1.1e-143 513.8 373 71.3
A10p20920 Brassica napus HOM05D006883 ORTHO05D008624 1.5e-143 513.5 353 73.7
BraA10t44156Z Brassica rapa HOM05D006883 ORTHO05D008624 1.9e-143 513.1 349 73.6
C09p57810 Brassica napus HOM05D006883 ORTHO05D008624 2.5e-143 512.7 376 70.2
Migut.G00206 Erythranthe guttata HOM05D006883 ORTHO05D008624 2.5e-143 512.7 410 66.8
MD13G1173600 Malus domestica HOM05D006883 ORTHO05D008624 2.5e-143 512.7 405 67.2
Ah.06g192160 Amaranthus hybridus HOM05D006883 ORTHO05D008624 4.3e-143 511.9 361 72.3
ECA246G3623 Erigeron canadensis HOM05D006883 ORTHO05D008624 7.3e-143 511.1 345 73.9
Oeu044787.1 Olea europaea HOM05D006883 ORTHO05D008624 9.6e-143 510.8 382 70.2
Dinv38322 Davidia involucrata HOM05D006883 ORTHO05D008624 1.3e-142 510.4 403 67.0
Lsat_1_v5_gn_3_24840 Lactuca sativa HOM05D006883 ORTHO05D008624 2.1e-142 509.6 406 65.8
unitig_748.g8372 Utricularia gibba HOM05D006883 ORTHO05D008624 7.6e-140 501.1 419 64.0
EL10Ac4g09099 Beta vulgaris HOM05D006883 ORTHO05D008624 3.0e-136 489.2 380 67.9
TPR.G1530 Trifolium pratense HOM05D006883 ORTHO05D008624 1.1e-135 487.3 362 69.1
SEGI_20295 Sequoiadendron giganteum HOM05D006883 ORTHO05D008624 3.3e-135 485.7 387 64.3
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 7.4e-135 484.6 377 69.8
CSS0011936 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 5.3e-133 478.4 343 69.1
SGA_v2.0_scaffold973G53763 Striga asiatica HOM05D006883 ORTHO05D008624 3.4e-132 475.7 397 63.7
CSS0009780 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 4.5e-132 475.3 343 68.5
HPP92_006930 Vanilla planifolia HOM05D006883 ORTHO05D008624 6.2e-126 454.9 345 66.1
Mapoly0058s0049 Marchantia polymorpha HOM05D006883 ORTHO05D008624 6.9e-125 451.4 359 63.2
AagrBONN_evm.TU.Sc2ySwM_369.460 Anthoceros agrestis HOM05D006883 ORTHO05D008624 4.5e-124 448.7 357 63.9
Pp3c7_3620 Physcomitrium patens HOM05D006883 ORTHO05D008624 1.2e-116 424.1 418 55.0
CBR_g77624 Chara braunii HOM05D006883 ORTHO05D008624 1.2e-113 414.1 359 59.1
Os03g0351200 Oryza sativa ssp. japonica HOM05D006883 ORTHO05D008624 1.0e-112 411.0 343 61.5
Zm00001eb016830 Zea mays HOM05D006883 ORTHO05D008624 5.1e-112 408.7 397 55.4
Gohir.D10G166900 Gossypium hirsutum HOM05D006883 ORTHO05D008624 1.2e-105 387.5 254 77.2
SMO174G0102 Selaginella moellendorffii HOM05D006883 ORTHO05D008624 1.2e-97 360.9 343 56.0
Cre01.g042800 Chlamydomonas reinhardtii HOM05D006883 ORTHO05D008624 5.2e-96 355.5 343 51.9
MELO3C006606.2 Cucumis melo HOM05D006883 ORTHO05D008624 6.7e-96 355.1 207 83.1
Cpa.g.sc1008.1 Carica papaya HOM05D006883 ORTHO05D008624 1.5e-95 354.0 291 66.7
MCO03G528 Micromonas commoda HOM05D006883 ORTHO05D008624 2.9e-91 339.7 338 53.6
DCAR_030558 Daucus carota HOM05D006883 ORTHO05D008624 1.2e-89 334.3 192 84.4
Solyc01g067290.3 Solanum lycopersicum HOM05D006883 ORTHO05D008624 1.5e-87 327.4 192 81.8
DCAR_030560 Daucus carota HOM05D006883 ORTHO05D008624 2.4e-85 320.1 231 71.0
PRCOL_00006445 Prasinoderma coloniale HOM05D006883 ORTHO05D008624 6.6e-59 232.3 334 39.2
Oeu061954.1 Olea europaea HOM05D006883 ORTHO05D008624 2.6e-31 140.6 121 60.3
Migut.M00184 Erythranthe guttata HOM05D006883 ORTHO05D008624 6.2e-17 92.8 115 51.3
GSVIVG01017797001 Vitis vinifera HOM05D006883 ORTHO05D008624 8.1e-17 92.4 73 68.5
Nitab4.5_0000031g0370 Nicotiana tabacum HOM05D000342 ORTHO05D000217 3.1e-08 63.9 306 24.8
Cc02_g17380 Coffea canephora HOM05D000342 ORTHO05D000217 1.2e-07 62.0 233 24.0
Glyma.01G172900 Glycine max HOM05D000342 ORTHO05D000217 1.2e-07 62.0 232 23.7
Glyma.11G070200 Glycine max HOM05D000342 ORTHO05D000217 2.0e-07 61.2 232 23.3
Oeu023320.2 Olea europaea HOM05D000342 ORTHO05D000217 4.5e-07 60.1 222 26.1
Phvul.011G044700 Phaseolus vulgaris HOM05D000342 ORTHO05D000217 1.3e-06 58.5 247 25.9
Sopen10g023230 Solanum pennellii HOM05D000342 ORTHO05D000217 1.3e-06 58.5 239 24.3
Cpa.g.sc6.140 Carica papaya HOM05D000342 ORTHO05D000217 1.7e-06 58.2 243 23.9
FvH4_2g09120 Fragaria vesca HOM05D000342 ORTHO05D000217 2.2e-06 57.8 241 23.2
FAN24G0625 Fragaria x ananassa HOM05D000342 ORTHO05D000217 2.2e-06 57.8 241 23.2
Manes.18G022950 Manihot esculenta HOM05D000342 ORTHO05D000217 2.2e-06 57.8 248 25.0
QL06p046772 Quercus lobata HOM05D000342 ORTHO05D000217 2.2e-06 57.8 233 23.6
Eucgr.E00344 Eucalyptus grandis HOM05D000342 ORTHO05D000217 2.9e-06 57.4 240 24.6
TAR376G0292 Trochodendron aralioides HOM05D000342 ORTHO05D000217 2.9e-06 57.4 239 24.7
Ciclev10028904m.g Citrus clementina HOM05D000342 ORTHO05D000217 3.8e-06 57.0 240 24.2
Haze_15070 Corylus avellana HOM05D000342 ORTHO05D000217 3.8e-06 57.0 219 23.7
Dinv13504 Davidia involucrata HOM05D000342 ORTHO05D000217 3.8e-06 57.0 291 21.6
BraA07t31628Z Brassica rapa HOM05D000342 ORTHO05D000217 4.9e-06 56.6 320 23.8
Peaxi162Scf00003g01221 Petunia axillaris HOM05D000342 ORTHO05D000217 4.9e-06 56.6 282 26.2
QL06p046832 Quercus lobata HOM05D000342 ORTHO05D000217 4.9e-06 56.6 221 25.3
A07p40860 Brassica napus HOM05D000342 ORTHO05D000217 6.5e-06 56.2 270 25.6
MD08G1029600 Malus domestica HOM05D000342 ORTHO05D000217 6.5e-06 56.2 291 25.8
QL06p046794 Quercus lobata HOM05D000342 ORTHO05D000217 6.5e-06 56.2 244 23.4
Solyc10g052490.2 Solanum lycopersicum HOM05D000342 ORTHO05D000217 6.5e-06 56.2 244 26.2
Ca_15361_v3 Cicer arietinum L. HOM05D000342 ORTHO05D000217 8.4e-06 55.8 250 23.2
Dinv19546 Davidia involucrata HOM05D000101 ORTHO05D000089 8.4e-06 55.8 252 25.8
Nn6g31746 Nelumbo nucifera HOM05D006026 ORTHO05D007502 8.4e-06 55.8 340 24.4
Nitab4.5_0000884g0010 Nicotiana tabacum HOM05D000342 ORTHO05D000217 8.4e-06 55.8 204 27.0
QL06p046946 Quercus lobata HOM05D000342 ORTHO05D000217 8.4e-06 55.8 285 24.2
Sed0026601 Sechium edule HOM05D000342 ORTHO05D000217 8.4e-06 55.8 245 23.3
VMungo1127G1380 Vigna mungo HOM05D000342 ORTHO05D000217 8.4e-06 55.8 224 24.6


User provided reference genes

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