Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 1.4e-93 346.3 181 100.0
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 2.3e-38 162.9 129 65.9
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 5.2e-35 151.8 130 62.3
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 8.9e-35 151.0 128 60.2
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 7.5e-34 147.9 128 59.4
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 1.3e-33 147.1 130 59.2
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 2.2e-33 146.4 130 59.2
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 3.7e-33 145.6 130 57.7
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 6.4e-33 144.8 130 58.5
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.1e-32 144.1 114 64.9
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 1.1e-32 144.1 130 59.2
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 1.4e-32 143.7 139 56.8
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 1.9e-32 143.3 132 59.1
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 2.4e-32 142.9 130 57.7
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 3.2e-32 142.5 130 60.8
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 4.1e-32 142.1 130 58.5
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 4.1e-32 142.1 132 58.3
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.4e-32 141.7 130 58.5
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.4e-32 141.7 130 57.7
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.4e-32 141.7 130 57.7
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 7.0e-32 141.4 130 56.2
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 7.0e-32 141.4 128 60.9
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 9.2e-32 141.0 130 58.5
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 9.2e-32 141.0 130 56.9
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 9.2e-32 141.0 130 58.5
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 9.2e-32 141.0 130 58.5
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 1.2e-31 140.6 128 57.8
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 1.6e-31 140.2 119 61.3
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 1.6e-31 140.2 128 59.4
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 2.0e-31 139.8 130 57.7
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 2.7e-31 139.4 130 56.9
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.7e-31 139.4 130 56.2
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 2.7e-31 139.4 122 59.0
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 3.5e-31 139.0 130 56.2
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 3.5e-31 139.0 130 56.9
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 6.0e-31 138.3 124 58.9
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 7.8e-31 137.9 130 55.4
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 1.7e-30 136.7 115 60.9
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 1.7e-30 136.7 130 54.6
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 1.7e-30 136.7 131 55.0
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 2.3e-30 136.3 130 55.4
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 2.3e-30 136.3 130 55.4
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 3.0e-30 136.0 120 55.8
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 3.0e-30 136.0 128 56.2
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 3.0e-30 136.0 131 58.8
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 5.0e-30 135.2 136 50.7
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 5.0e-30 135.2 135 52.6
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 5.0e-30 135.2 133 51.1
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 5.0e-30 135.2 130 56.9
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 6.6e-30 134.8 130 53.8
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 6.6e-30 134.8 130 56.9
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 1.1e-29 134.0 129 54.3
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 1.5e-29 133.7 133 56.4
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 1.5e-29 133.7 130 56.2
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 1.5e-29 133.7 135 51.9
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 1.5e-29 133.7 133 57.1
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.9e-29 133.3 123 55.3
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 2.5e-29 132.9 131 51.9
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 2.5e-29 132.9 131 51.9
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 3.3e-29 132.5 123 55.3
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 3.3e-29 132.5 130 59.2
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 4.3e-29 132.1 136 51.5
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 5.6e-29 131.7 120 54.2
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 5.6e-29 131.7 120 54.2
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 1.2e-28 130.6 132 50.8
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 1.6e-28 130.2 119 53.8
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 1.6e-28 130.2 118 53.4
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 2.1e-28 129.8 135 49.6
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 2.8e-28 129.4 135 53.3
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 3.6e-28 129.0 131 53.4
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 3.6e-28 129.0 131 53.4
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 6.2e-28 128.3 130 50.8
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 1.1e-27 127.5 118 55.9
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.1e-27 127.5 136 50.7
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.1e-27 127.5 136 50.7
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 1.8e-27 126.7 118 52.5
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 3.1e-27 125.9 120 52.5
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 3.1e-27 125.9 134 50.0
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 4.0e-27 125.6 136 49.3
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 6.8e-27 124.8 133 51.9
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 8.9e-27 124.4 114 52.6
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 1.2e-26 124.0 125 53.6
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 4.4e-26 122.1 132 49.2
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 4.4e-26 122.1 123 52.0
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 2.2e-25 119.8 128 49.2
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 4.9e-25 118.6 118 53.4
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 8.3e-25 117.9 102 55.9
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 1.1e-24 117.5 128 50.0
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 1.9e-24 116.7 112 55.4
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 1.9e-24 116.7 133 48.9
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 2.4e-24 116.3 137 47.4
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 7.8e-23 111.3 131 49.6
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 6.6e-22 108.2 127 48.8
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.3e-19 99.8 126 46.8
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 8.9e-19 97.8 128 41.4
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 4.4e-18 95.5 133 42.9
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 5.8e-18 95.1 132 41.7
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 1.4e-16 90.5 93 49.5
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 3.5e-15 85.9 120 40.0
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 3.5e-15 85.9 110 46.4
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 6.0e-07 58.5 50 60.0
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 2.3e-06 56.6 70 48.6


User provided reference genes

Program Settings