Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1570 Ceratophyllum demersum HOM05D000290 ORTHO05D007415 2.9e-73 278.5 141 100.0
CDE08G1592 Ceratophyllum demersum HOM05D000290 ORTHO05D007415 4.9e-57 224.6 138 84.8
Nn2g10759 Nelumbo nucifera HOM05D000290 ORTHO05D007415 1.7e-20 103.2 148 39.9
Cfa001614 Carpinus fangiana HOM05D000290 ORTHO05D007415 3.4e-18 95.5 146 37.7
Ciclev10030711m.g Citrus clementina HOM05D000290 ORTHO05D007415 1.3e-17 93.6 148 39.2
Oeu034811.1 Olea europaea HOM05D000290 ORTHO05D007415 6.5e-17 91.3 126 42.1
PSO339G6283 Papaver somniferum HOM05D000290 ORTHO05D007415 6.5e-17 91.3 152 36.2
TAR636G1312 Trochodendron aralioides HOM05D000290 ORTHO05D007415 6.5e-17 91.3 150 35.3
Prupe.8G142600 Prunus persica HOM05D000290 ORTHO05D007415 8.5e-17 90.9 146 38.4
Glyma.20G179100 Glycine max HOM05D000290 ORTHO05D007415 1.4e-16 90.1 133 37.6
Peaxi162Scf00272g00222 Petunia axillaris HOM05D000290 ORTHO05D007415 1.4e-16 90.1 124 43.5
GSVIVG01016296001 Vitis vinifera HOM05D000290 ORTHO05D007415 2.5e-16 89.4 148 33.8
Hma1.2p1_0063F.1_g034380 Hydrangea macrophylla HOM05D000290 ORTHO05D007415 3.2e-16 89.0 146 33.6
Aqoxy1G01252 Aquilegia oxysepala HOM05D000290 ORTHO05D007415 4.2e-16 88.6 127 38.6
Glyma.10G212000 Glycine max HOM05D000290 ORTHO05D007415 7.2e-16 87.8 137 37.2
Haze_16906 Corylus avellana HOM05D000290 ORTHO05D007415 1.6e-15 86.7 146 38.4
Dinv11786 Davidia involucrata HOM05D001952 ORTHO05D007415 2.7e-15 85.9 134 40.3
PGR142G4180 Punica granatum HOM05D000290 ORTHO05D007415 2.7e-15 85.9 140 37.1
Cpa.g.sc53.63 Carica papaya HOM05D000290 ORTHO05D007415 6.1e-15 84.7 149 36.9
Nitab4.5_0001448g0010 Nicotiana tabacum HOM05D000290 ORTHO05D007415 6.1e-15 84.7 141 37.6
PSO063G6866 Papaver somniferum HOM05D000290 ORTHO05D007415 6.1e-15 84.7 148 35.1
Sabra10G0170700 Salix brachista HOM05D000290 ORTHO05D007415 6.1e-15 84.7 127 37.0
Eucgr.G02820 Eucalyptus grandis HOM05D000290 ORTHO05D007415 1.0e-14 84.0 151 37.7
Nitab4.5_0000233g0060 Nicotiana tabacum HOM05D000290 ORTHO05D007415 1.0e-14 84.0 141 37.6
SGA_v2.0_scaffold341G49361 Striga asiatica HOM05D000290 ORTHO05D007415 1.0e-14 84.0 141 35.5
Thecc.10G071500 Theobroma cacao HOM05D000290 ORTHO05D007415 1.0e-14 84.0 148 35.1
CiPaw.02G174700 Carya illinoinensis HOM05D000290 ORTHO05D007415 1.8e-14 83.2 149 35.6
Manes.07G104400 Manihot esculenta HOM05D000290 ORTHO05D007415 1.8e-14 83.2 139 33.8
Medtr1g095480 Medicago truncatula HOM05D000290 ORTHO05D007415 2.3e-14 82.8 134 36.6
QL08p056306 Quercus lobata HOM05D000290 ORTHO05D007415 2.3e-14 82.8 134 35.1
SalBow3G1677 Salvia bowleyana HOM05D000290 ORTHO05D007415 3.0e-14 82.4 120 40.8
Ah.16g106370 Amaranthus hybridus HOM05D000290 ORTHO05D007415 3.9e-14 82.0 118 37.3
Cc09_g02000 Coffea canephora HOM05D000290 ORTHO05D007415 5.2e-14 81.6 126 36.5
Potri.010G221000 Populus trichocarpa HOM05D000290 ORTHO05D007415 5.2e-14 81.6 127 37.8
VMungo0720G0458 Vigna mungo HOM05D000290 ORTHO05D007415 6.7e-14 81.3 133 36.1
arahy.Tifrunner.gnm1.ann1.IU7X6X Arachis hypogaea HOM05D000290 ORTHO05D007415 8.8e-14 80.9 143 34.3
MSTRG.369 Avicennia marina HOM05D000290 ORTHO05D007415 1.1e-13 80.5 118 39.0
arahy.Tifrunner.gnm1.ann1.AS9ABP Arachis hypogaea HOM05D000290 ORTHO05D007415 1.5e-13 80.1 143 33.6
FvH4_7g19760 Fragaria vesca HOM05D000290 ORTHO05D007415 5.7e-13 78.2 134 37.3
FAN06G5088 Fragaria x ananassa HOM05D000290 ORTHO05D007415 5.7e-13 78.2 134 37.3
Duzib106G1672 Durio zibethinus HOM05D000290 ORTHO05D007415 9.7e-13 77.4 150 32.0
Migut.F01770 Erythranthe guttata HOM05D000290 ORTHO05D007415 9.7e-13 77.4 117 41.0
HanXRQChr09g0246431 Helianthus annuus HOM05D000290 ORTHO05D007415 9.7e-13 77.4 139 34.5
Lj5g0003555 Lotus japonicus HOM05D000290 ORTHO05D007415 9.7e-13 77.4 138 36.2
RcHm_v2.0_Chr1g0363651 Rosa chinensis HOM05D000290 ORTHO05D007415 9.7e-13 77.4 134 36.6
CsaV3_5G036380 Cucumis sativus L. HOM05D000290 ORTHO05D007415 1.3e-12 77.0 152 30.9
FAN03G2244 Fragaria x ananassa HOM05D000290 ORTHO05D007415 1.3e-12 77.0 147 33.3
Gorai.011G240500 Gossypium raimondii HOM05D000290 ORTHO05D007415 1.3e-12 77.0 150 34.0
MD07G1176000 Malus domestica HOM05D000290 ORTHO05D007415 1.7e-12 76.6 125 36.0
Gohir.D10G215000 Gossypium hirsutum HOM05D000290 ORTHO05D007415 2.8e-12 75.9 150 34.0
CSS0015563 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007415 3.7e-12 75.5 129 35.7
CSS0025800 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007415 3.7e-12 75.5 129 35.7
CANSAT56G0046 Cannabis sativa HOM05D000290 ORTHO05D007415 3.7e-12 75.5 148 28.4
MELO3C012436.2 Cucumis melo HOM05D000290 ORTHO05D007415 3.7e-12 75.5 148 31.8
Gohir.A10G206900 Gossypium hirsutum HOM05D000290 ORTHO05D007415 3.7e-12 75.5 150 34.0
Solyc04g049390.3 Solanum lycopersicum HOM05D000290 ORTHO05D007415 4.8e-12 75.1 123 38.2
CAN.G29.6 Capsicum annuum HOM05D000290 ORTHO05D007415 6.3e-12 74.7 123 38.2
TPR.G1810 Trifolium pratense HOM05D000290 ORTHO05D007415 6.3e-12 74.7 130 34.6
EL10Ac2g03246 Beta vulgaris HOM05D000290 ORTHO05D007415 8.2e-12 74.3 125 35.2
ECA232G0301 Erigeron canadensis HOM05D000290 ORTHO05D007415 1.1e-11 73.9 125 37.6
Sopen04g019370 Solanum pennellii HOM05D000290 ORTHO05D007415 1.1e-11 73.9 123 37.4
Lj1A916G22 Lonicera japonica HOM05D000290 ORTHO05D007415 1.4e-11 73.6 141 34.0
Sed0009428 Sechium edule HOM05D000290 ORTHO05D007415 2.4e-11 72.8 131 35.1
ATR0115G028 Amborella trichopoda HOM05D000290 ORTHO05D007415 4.1e-11 72.0 126 34.9
Rhsim03G0124000 Rhododendron simsii HOM05D000290 ORTHO05D007415 9.1e-11 70.9 121 33.9
Rhsim03G0124100 Rhododendron simsii HOM05D000290 ORTHO05D007415 9.1e-11 70.9 121 33.9
DCAR_006445 Daucus carota HOM05D000290 ORTHO05D007415 1.2e-10 70.5 129 32.6
TWI63G0995 Tripterygium wilfordii HOM05D000290 ORTHO05D007415 1.2e-10 70.5 146 30.8
Rhsim09G0040800 Rhododendron simsii HOM05D000290 ORTHO05D007415 2.6e-10 69.3 120 34.2
Ca_10576_v3 Cicer arietinum L. HOM05D000290 ORTHO05D007415 4.5e-10 68.6 124 33.1
COL.COLO4_23704 Corchorus olitorius HOM05D000290 ORTHO05D007415 5.9e-10 68.2 152 30.9
Atru.chr12.734 Acer truncatum HOM05D000290 ORTHO05D007415 7.7e-10 67.8 147 34.0
AT2G39190 Arabidopsis thaliana HOM05D000290 ORTHO05D007415 7.7e-10 67.8 127 34.6
Os02g0805800 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D007415 7.7e-10 67.8 138 29.0
Thhalv10016257m.g Eutrema salsugineum HOM05D000290 ORTHO05D007415 1.0e-09 67.4 127 33.9
Sp4g21520 Schrenkiella parvula HOM05D000290 ORTHO05D007415 1.0e-09 67.4 127 34.6
Zm00001eb258280 Zea mays HOM05D000290 ORTHO05D007415 1.0e-09 67.4 116 32.8
AUR62037660 Chenopodium quinoa HOM05D000290 ORTHO05D007415 1.3e-09 67.0 118 35.6
Phvul.007G093900 Phaseolus vulgaris HOM05D000290 ORTHO05D007415 1.7e-09 66.6 124 33.1
C03p25970 Brassica napus HOM05D000290 ORTHO05D007415 3.8e-09 65.5 127 34.6
Aa31LG5G20180 Aethionema arabicum HOM05D000290 ORTHO05D007415 5.0e-09 65.1 118 32.2
A03p21900 Brassica napus HOM05D000290 ORTHO05D007415 8.5e-09 64.3 127 33.9
BraA03t11426Z Brassica rapa HOM05D000290 ORTHO05D007415 8.5e-09 64.3 127 33.9
Sc20g0001930 Simmondsia chinensis HOM05D000290 ORTHO05D007415 1.1e-08 63.9 118 33.9
unitig_22.g5127 Utricularia gibba HOM05D000290 ORTHO05D007415 1.1e-08 63.9 123 32.5
AL4G36490 Arabidopsis lyrata HOM05D000290 ORTHO05D007415 1.5e-08 63.5 125 32.8
BcaB01g03651 Brassica carinata HOM05D000290 ORTHO05D007415 1.5e-08 63.5 128 34.4
BolC3t14982H Brassica oleracea HOM05D000290 ORTHO05D007415 1.5e-08 63.5 128 34.4
Lsat_1_v5_gn_9_68761 Lactuca sativa HOM05D000290 ORTHO05D007415 1.5e-08 63.5 141 30.5
Actinidia03052 Actinidia chinensis HOM05D000290 ORTHO05D007415 3.2e-08 62.4 140 28.6
BcaB01g03617 Brassica carinata HOM05D000290 ORTHO05D007415 3.2e-08 62.4 125 33.6
THA.LOC104809972 Tarenaya hassleriana HOM05D000290 ORTHO05D007415 4.2e-08 62.0 121 33.9
Carub.0004s2123 Capsella rubella HOM05D000290 ORTHO05D007415 9.4e-08 60.8 125 32.0
Psat6g185080 Pisum sativum HOM05D000290 ORTHO05D007415 1.6e-07 60.1 134 29.9
Lalb_Chr06g0162261 Lupinus albus HOM05D000290 ORTHO05D007415 4.0e-06 55.5 124 29.0


User provided reference genes

Program Settings