Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 3.8e-207 724.5 355 100.0
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 7.9e-96 354.8 392 47.4
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 3.3e-94 349.4 402 46.3
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 5.7e-94 348.6 404 46.8
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 7.4e-94 348.2 402 46.8
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 1.3e-93 347.4 371 49.3
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 2.8e-93 346.3 403 49.1
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 6.3e-93 345.1 388 47.2
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 6.3e-93 345.1 404 47.5
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.1e-92 344.4 397 46.6
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 1.1e-92 344.4 394 46.4
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.8e-92 343.6 401 46.9
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 2.4e-92 343.2 404 45.5
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 5.3e-92 342.0 392 47.2
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 9.1e-92 341.3 394 46.4
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 1.5e-91 340.5 414 44.7
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 8.5e-90 334.7 403 45.4
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 1.1e-89 334.3 357 48.2
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 1.1e-89 334.3 400 47.0
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 1.5e-89 334.0 402 46.0
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 5.5e-89 332.0 403 44.9
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 7.2e-89 331.6 398 45.5
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 1.2e-88 330.9 404 44.1
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 1.2e-88 330.9 406 46.8
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 1.2e-88 330.9 386 46.4
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 1.6e-88 330.5 404 45.3
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 2.1e-88 330.1 404 45.3
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 4.7e-88 328.9 400 45.2
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 4.7e-88 328.9 405 45.9
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 6.1e-88 328.6 423 44.0
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 6.1e-88 328.6 405 44.2
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 8.0e-88 328.2 405 43.2
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 3.0e-87 326.2 427 43.3
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 3.0e-87 326.2 427 43.3
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 3.9e-87 325.9 404 46.0
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 3.9e-87 325.9 400 45.0
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 2.0e-86 323.6 400 44.8
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 5.7e-86 322.0 404 45.0
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 1.3e-85 320.9 404 43.3
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 1.7e-85 320.5 405 44.7
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.2e-85 320.1 429 42.4
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 2.8e-85 319.7 399 45.9
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 4.8e-85 318.9 398 45.2
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 6.3e-85 318.5 409 41.8
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 8.2e-85 318.2 410 44.1
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 1.1e-84 317.8 408 44.9
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 3.1e-84 316.2 398 45.0
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 2.6e-83 313.2 401 43.9
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 3.5e-83 312.8 397 43.1
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 4.5e-83 312.4 400 43.2
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 1.0e-82 311.2 390 43.6
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 1.0e-82 311.2 387 43.4
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 1.0e-82 311.2 418 42.1
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 1.7e-82 310.5 396 44.2
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 3.8e-82 309.3 373 45.6
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 3.8e-82 309.3 391 43.2
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 6.5e-82 308.5 402 44.0
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 8.5e-82 308.1 387 43.9
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 1.1e-81 307.8 404 42.3
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 1.9e-81 307.0 388 43.0
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 2.5e-81 306.6 401 41.6
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 5.5e-81 305.4 405 42.2
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 1.2e-80 304.3 387 43.7
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.6e-80 303.9 381 45.4
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 2.1e-80 303.5 386 43.0
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 2.7e-80 303.1 386 43.8
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 2.7e-80 303.1 400 43.0
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 6.1e-80 302.0 387 43.7
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 8.0e-80 301.6 394 43.9
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 1.8e-79 300.4 406 42.4
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 4.0e-79 299.3 364 46.2
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 6.8e-79 298.5 400 42.8
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.2e-78 297.7 397 43.6
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.2e-78 297.7 384 44.0
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 2.0e-78 297.0 410 41.5
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 2.6e-78 296.6 391 42.7
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 1.3e-77 294.3 400 41.2
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 1.7e-77 293.9 516 35.7
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 4.8e-77 292.4 399 41.9
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 6.3e-77 292.0 396 42.2
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 3.1e-76 289.7 387 40.8
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 9.1e-76 288.1 454 40.5
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 1.6e-75 287.3 397 42.3
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 3.6e-72 276.2 421 38.7
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 1.4e-71 274.2 386 40.2
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 2.0e-70 270.4 341 44.6
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 4.4e-70 269.2 308 47.7
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 5.7e-70 268.9 376 41.2
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.8e-69 266.5 283 47.3
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 1.8e-68 263.8 404 41.3
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 3.5e-67 259.6 401 39.2
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 2.1e-64 250.4 338 42.9
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 3.6e-64 249.6 348 38.8
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 6.3e-61 238.8 352 41.8
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 8.3e-61 238.4 355 40.8
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 2.3e-55 220.3 260 45.0
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 5.0e-50 202.6 339 35.4
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 7.3e-49 198.7 167 55.7
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 3.5e-43 179.9 240 42.9
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 3.0e-42 176.8 112 69.6
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 9.9e-38 161.8 106 67.0
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 5.4e-28 129.4 71 90.1
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 1.0e-26 125.2 168 45.2
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 3.9e-26 123.2 87 58.6
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 5.6e-25 119.4 161 41.6
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 4.8e-24 116.3 158 44.3
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 3.8e-21 106.7 162 44.4
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.9e-12 77.8 157 33.8
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 5.6e-09 66.2 35 77.1
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.3e-08 65.1 179 29.1
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 4.8e-08 63.2 96 41.7


User provided reference genes

Program Settings