Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.6e-252 875.5 424 100.0
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 2.0e-122 443.4 419 53.9
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 2.1e-119 433.3 422 51.9
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 2.7e-119 433.0 433 49.4
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 8.8e-118 427.9 418 51.9
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.2e-117 427.6 419 51.3
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.6e-117 426.4 421 50.4
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 4.8e-116 422.2 429 50.6
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.8e-115 420.2 423 50.4
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 7.0e-115 418.3 419 52.5
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 9.1e-115 417.9 422 49.3
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 5.9e-114 415.2 421 48.5
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 5.9e-114 415.2 424 49.1
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.3e-113 414.1 418 49.3
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 1.7e-113 413.7 422 50.2
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 2.2e-113 413.3 425 49.6
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 3.8e-113 412.5 421 50.8
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 1.9e-112 410.2 412 50.2
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 1.0e-110 404.4 412 50.0
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 1.8e-110 403.7 425 47.5
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 8.8e-110 401.4 420 48.3
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 1.2e-109 401.0 372 51.6
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 1.2e-109 401.0 419 50.4
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 2.6e-109 399.8 410 48.3
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 3.4e-109 399.4 433 48.3
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 4.4e-109 399.1 414 49.0
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 5.7e-109 398.7 416 47.8
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 1.3e-108 397.5 419 47.5
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 2.2e-108 396.7 420 49.5
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 2.2e-108 396.7 425 46.6
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 2.2e-108 396.7 423 48.7
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 2.2e-108 396.7 417 49.9
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 3.7e-108 396.0 419 47.3
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 3.7e-108 396.0 426 48.4
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 3.7e-108 396.0 420 48.1
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 4.8e-108 395.6 452 45.6
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 6.3e-108 395.2 421 47.5
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 8.3e-108 394.8 425 48.9
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 8.3e-108 394.8 425 48.9
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 1.4e-107 394.0 435 47.8
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 5.4e-107 392.1 420 48.1
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 9.1e-107 391.3 426 47.9
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.2e-106 391.0 426 47.9
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.0e-106 390.2 435 47.4
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 3.5e-106 389.4 418 47.6
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 3.5e-106 389.4 418 47.6
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 5.0e-105 385.6 433 45.5
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 6.6e-105 385.2 422 46.9
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 8.6e-105 384.8 413 48.7
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.5e-104 384.0 424 47.4
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 7.2e-104 381.7 412 49.8
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 1.6e-103 380.6 417 47.2
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.8e-103 379.8 420 47.4
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 2.8e-103 379.8 418 46.7
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.6e-103 379.4 424 46.9
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 3.6e-103 379.4 390 48.7
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.8e-102 377.1 424 46.7
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 3.0e-102 376.3 425 46.4
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 5.2e-102 375.6 420 46.4
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 6.8e-102 375.2 421 47.3
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.5e-101 374.0 370 51.4
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 4.4e-101 372.5 427 47.5
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 4.9e-100 369.0 422 46.2
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 3.1e-99 366.3 419 46.3
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 4.1e-99 365.9 406 47.0
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 2.0e-98 363.6 425 44.2
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 2.7e-98 363.2 436 45.4
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 3.5e-98 362.8 421 45.8
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 1.5e-96 357.5 413 45.3
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 3.3e-96 356.3 423 44.9
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 9.5e-96 354.8 396 47.0
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 1.0e-94 351.3 517 39.7
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 1.4e-94 350.9 418 45.7
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 2.0e-93 347.1 425 43.5
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 3.4e-93 346.3 432 41.7
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 9.8e-93 344.7 419 42.5
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 2.2e-92 343.6 178 93.8
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 4.9e-92 342.4 358 48.0
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 2.5e-88 330.1 426 42.0
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 2.8e-87 326.6 429 42.0
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 2.8e-87 326.6 429 42.0
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 3.6e-87 326.2 428 42.1
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 1.8e-86 323.9 428 41.6
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 1.5e-85 320.9 390 44.4
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 3.4e-85 319.7 361 47.1
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 2.9e-84 316.6 411 42.3
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.1e-83 314.7 409 42.1
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 2.4e-83 313.5 422 40.3
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 3.2e-83 313.2 411 42.1
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 4.1e-83 312.8 427 40.5
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 2.7e-82 310.1 415 41.4
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 2.3e-81 307.0 375 43.5
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 5.8e-77 292.4 362 42.8
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 6.4e-76 288.9 647 29.8
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 4.7e-71 272.7 294 49.7
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.2e-69 268.1 240 56.7
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.8e-68 263.1 240 55.4
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 3.9e-65 253.1 238 51.7
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 4.3e-56 223.0 456 32.9
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 2.1e-55 220.7 460 30.9
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.6e-47 194.5 217 45.6
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 1.1e-46 191.8 248 41.9
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.2e-45 188.3 128 63.3
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 5.5e-43 179.5 220 43.2
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 1.9e-35 154.5 138 52.2
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 1.6e-34 151.4 138 48.6
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.9e-32 144.4 278 34.5
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 1.0e-20 105.5 104 52.9
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 2.2e-12 77.8 104 36.5
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.2e-11 73.9 47 66.0
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 2.8e-07 60.8 136 28.7
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 3.1e-06 57.4 50 54.0
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 7.0e-06 56.2 51 49.0


User provided reference genes

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