Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1475 Ceratophyllum demersum HOM05D006752 ORTHO05D008597 5.3e-190 667.5 338 100.0
FAN28G1533 Fragaria x ananassa HOM05D006752 ORTHO05D008597 2.8e-82 309.7 353 49.3
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 3.6e-82 309.3 333 53.2
FvH4_1g04220 Fragaria vesca HOM05D006752 ORTHO05D008597 6.2e-82 308.5 355 49.0
FAN19G2061 Fragaria x ananassa HOM05D006752 ORTHO05D008597 6.2e-82 308.5 355 49.0
Nitab4.5_0001164g0060 Nicotiana tabacum HOM05D006752 ORTHO05D008597 1.4e-81 307.4 331 51.4
Nn8g39294 Nelumbo nucifera HOM05D006752 ORTHO05D008597 2.4e-81 306.6 332 52.7
FAN26G3101 Fragaria x ananassa HOM05D006752 ORTHO05D008597 3.1e-81 306.2 353 49.0
Sopen12g002660 Solanum pennellii HOM05D006752 ORTHO05D008597 6.9e-81 305.1 333 52.6
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 9.0e-81 304.7 330 52.7
Atru.chr7.1279 Acer truncatum HOM05D006752 ORTHO05D008597 5.8e-80 302.0 342 50.0
Nitab4.5_0005520g0050 Nicotiana tabacum HOM05D006752 ORTHO05D008597 7.6e-80 301.6 331 50.2
Solyc12g006710.3 Solanum lycopersicum HOM05D006752 ORTHO05D008597 1.3e-79 300.8 333 51.7
Aqoxy7G01881 Aquilegia oxysepala HOM05D006752 ORTHO05D008597 1.4e-78 297.4 331 52.0
PGSC0003DMG400020684 Solanum tuberosum HOM05D006752 ORTHO05D008597 1.9e-78 297.0 333 51.7
Actinidia20330 Actinidia chinensis HOM05D006752 ORTHO05D008597 2.4e-78 296.6 344 50.0
CAN.G377.33 Capsicum annuum HOM05D006752 ORTHO05D008597 5.4e-78 295.4 333 51.4
CSS0021299 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 7.1e-78 295.0 330 50.9
Phvul.009G200000 Phaseolus vulgaris HOM05D006752 ORTHO05D008597 1.6e-77 293.9 352 46.9
PSO782G3782 Papaver somniferum HOM05D006752 ORTHO05D008597 2.7e-77 293.1 339 51.3
Prupe.7G235200 Prunus persica HOM05D006752 ORTHO05D008597 2.7e-77 293.1 350 46.9
CANSAT56G2958 Cannabis sativa HOM05D006752 ORTHO05D008597 3.5e-77 292.7 338 48.8
MBI01_g13570_MAGBIO Magnolia biondii HOM05D006752 ORTHO05D008597 3.5e-77 292.7 410 43.2
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 7.9e-77 291.6 348 48.6
GSVIVG01015454001 Vitis vinifera HOM05D006752 ORTHO05D008597 1.8e-76 290.4 337 49.0
RcHm_v2.0_Chr2g0089761 Rosa chinensis HOM05D006752 ORTHO05D008597 1.5e-75 287.3 350 47.1
Sed0015690 Sechium edule HOM05D006752 ORTHO05D008597 3.3e-75 286.2 335 46.9
MD02G1061400 Malus domestica HOM05D006752 ORTHO05D008597 7.4e-75 285.0 343 46.1
Ah.14g081300 Amaranthus hybridus HOM05D006752 ORTHO05D008597 2.4e-73 280.0 331 45.9
Lalb_Chr11g0071961 Lupinus albus HOM05D006752 ORTHO05D008597 2.4e-73 280.0 334 46.7
TWI34G0637 Tripterygium wilfordii HOM05D006752 ORTHO05D008597 2.4e-73 280.0 341 47.2
Thecc.09G116900 Theobroma cacao HOM05D006752 ORTHO05D008597 4.0e-73 279.3 348 48.9
VMungo1309G1199 Vigna mungo HOM05D006752 ORTHO05D008597 6.9e-73 278.5 369 44.7
Glyma.06G211500 Glycine max HOM05D006752 ORTHO05D008597 1.5e-72 277.3 344 46.8
ClCG06G010500 Citrullus lanatus HOM05D006752 ORTHO05D008597 2.0e-72 276.9 338 47.3
HanXRQChr10g0317451 Helianthus annuus HOM05D006752 ORTHO05D008597 2.6e-72 276.6 340 46.2
Hund09171 Selenicereus undatus HOM05D006752 ORTHO05D008597 3.4e-72 276.2 331 48.0
arahy.Tifrunner.gnm1.ann1.CJP391 Arachis hypogaea HOM05D006752 ORTHO05D008597 4.5e-72 275.8 346 46.2
CiPaw.04G167500 Carya illinoinensis HOM05D006752 ORTHO05D008597 1.7e-71 273.9 395 41.3
Gohir.A06G059800 Gossypium hirsutum HOM05D006752 ORTHO05D008597 2.9e-71 273.1 337 47.5
Haze_25667 Corylus avellana HOM05D006752 ORTHO05D008597 4.9e-71 272.3 330 47.9
Lj1g0009545 Lotus japonicus HOM05D006752 ORTHO05D008597 8.4e-71 271.6 388 42.8
vmacro20678 Vaccinium macrocarpon HOM05D006752 ORTHO05D008597 1.4e-70 270.8 347 47.3
arahy.Tifrunner.gnm1.ann1.TG1F9L Arachis hypogaea HOM05D006752 ORTHO05D008597 1.9e-70 270.4 362 44.2
Gorai.010G068100 Gossypium raimondii HOM05D006752 ORTHO05D008597 7.1e-70 268.5 339 46.9
Os01g0178100 Oryza sativa ssp. japonica HOM05D006752 ORTHO05D008597 9.3e-70 268.1 328 46.6
Gohir.D06G058000 Gossypium hirsutum HOM05D006752 ORTHO05D008597 1.6e-69 267.3 339 46.6
ATR0815G047 Amborella trichopoda HOM05D006752 ORTHO05D008597 3.5e-69 266.2 349 45.3
Duzib168G0331 Durio zibethinus HOM05D006752 ORTHO05D008597 4.6e-69 265.8 349 45.0
Cc06_g09220 Coffea canephora HOM05D006752 ORTHO05D008597 7.9e-69 265.0 332 45.2
Rhsim01G0090500 Rhododendron simsii HOM05D006752 ORTHO05D008597 7.9e-69 265.0 337 46.3
Manes.03G066500 Manihot esculenta HOM05D006752 ORTHO05D008597 1.8e-68 263.8 396 42.7
A10p19780 Brassica napus HOM05D006752 ORTHO05D008597 8.7e-68 261.5 359 44.0
BraA10t44054Z Brassica rapa HOM05D006752 ORTHO05D008597 8.7e-68 261.5 359 44.0
ECA234G0120 Erigeron canadensis HOM05D006752 ORTHO05D008597 8.7e-68 261.5 349 44.7
EL10Ac8g18558 Beta vulgaris HOM05D006752 ORTHO05D008597 4.3e-67 259.2 328 45.1
Eucgr.C01084 Eucalyptus grandis HOM05D006752 ORTHO05D008597 4.3e-67 259.2 337 43.9
BcaC04g19401 Brassica carinata HOM05D006752 ORTHO05D008597 5.6e-67 258.8 361 44.9
C09p56100 Brassica napus HOM05D006752 ORTHO05D008597 5.6e-67 258.8 361 44.9
BolC9t58477H Brassica oleracea HOM05D006752 ORTHO05D008597 5.6e-67 258.8 361 44.9
Sc08g0007050 Simmondsia chinensis HOM05D006752 ORTHO05D008597 9.6e-67 258.1 330 45.8
MELO3C025306.2 Cucumis melo HOM05D006752 ORTHO05D008597 1.3e-66 257.7 400 40.2
AL6G31480 Arabidopsis lyrata HOM05D006752 ORTHO05D008597 3.7e-66 256.1 361 43.2
DCAR_010437 Daucus carota HOM05D006752 ORTHO05D008597 3.7e-66 256.1 343 46.4
PGR142G0135 Punica granatum HOM05D006752 ORTHO05D008597 3.7e-66 256.1 341 45.7
Medtr2g050180 Medicago truncatula HOM05D006752 ORTHO05D008597 6.2e-66 255.4 339 44.5
Sp6g24430 Schrenkiella parvula HOM05D006752 ORTHO05D008597 1.8e-65 253.8 359 42.9
AT5G19950 Arabidopsis thaliana HOM05D006752 ORTHO05D008597 3.1e-65 253.1 358 42.2
Lsat_1_v5_gn_5_99240 Lactuca sativa HOM05D006752 ORTHO05D008597 3.1e-65 253.1 304 47.4
Peaxi162Scf00984g00260 Petunia axillaris HOM05D006752 ORTHO05D008597 3.1e-65 253.1 335 47.2
CARHR192900 Cardamine hirsuta HOM05D006752 ORTHO05D008597 2.0e-64 250.4 353 42.8
Thhalv10013545m.g Eutrema salsugineum HOM05D006752 ORTHO05D008597 2.0e-64 250.4 360 43.9
Psat1g025400 Pisum sativum HOM05D006752 ORTHO05D008597 2.0e-64 250.4 338 44.4
Aa31LG8G9350 Aethionema arabicum HOM05D006752 ORTHO05D008597 2.6e-64 250.0 332 45.2
Potri.018G073100 Populus trichocarpa HOM05D006752 ORTHO05D008597 4.5e-64 249.2 418 39.2
HPP92_008698 Vanilla planifolia HOM05D006752 ORTHO05D008597 4.5e-64 249.2 341 45.5
Carub.0006s1832 Capsella rubella HOM05D006752 ORTHO05D008597 5.8e-64 248.8 363 41.9
Lj7C639G3 Lonicera japonica HOM05D006752 ORTHO05D008597 5.8e-64 248.8 407 41.8
THA.LOC104815109 Tarenaya hassleriana HOM05D006752 ORTHO05D008597 7.6e-64 248.4 349 42.4
SGA_v2.0_scaffold229G43313 Striga asiatica HOM05D006752 ORTHO05D008597 3.2e-62 243.0 344 43.0
TPR.G10362 Trifolium pratense HOM05D006752 ORTHO05D008597 9.3e-62 241.5 341 44.3
Sabra18G0063600 Salix brachista HOM05D006752 ORTHO05D008597 1.2e-61 241.1 400 39.8
QL02p086379 Quercus lobata HOM05D006752 ORTHO05D008597 2.1e-61 240.4 472 35.4
BcaB08g36551 Brassica carinata HOM05D006752 ORTHO05D008597 3.0e-60 236.5 353 44.8
Migut.J01179 Erythranthe guttata HOM05D006752 ORTHO05D008597 3.3e-59 233.0 347 43.8
Cpa.g.sc23.163 Carica papaya HOM05D006752 ORTHO05D008597 5.7e-59 232.3 371 41.0
AUR62033416 Chenopodium quinoa HOM05D006752 ORTHO05D008597 7.4e-59 231.9 348 40.5
MSTRG.19609 Avicennia marina HOM05D006752 ORTHO05D008597 2.6e-56 223.4 341 43.1
Hma1.2p1_0018F.1_g013060 Hydrangea macrophylla HOM05D006752 ORTHO05D008597 2.2e-55 220.3 187 58.8
Ca_05468_v3 Cicer arietinum L. HOM05D006752 ORTHO05D008597 1.4e-54 217.6 205 55.1
SalBow6G5676 Salvia bowleyana HOM05D006752 ORTHO05D008597 3.2e-54 216.5 340 43.2
Oeu018257.1 Olea europaea HOM05D006752 ORTHO05D008597 1.2e-53 214.5 299 44.8
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.0e-47 194.9 282 44.0
SEGI_05783 Sequoiadendron giganteum HOM05D006752 ORTHO05D008597 5.0e-47 192.6 428 34.1
Sc08g0007030 Simmondsia chinensis HOM05D006752 ORTHO05D008597 1.6e-45 187.6 192 52.1
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 8.2e-42 175.3 336 38.7
CsaV3_1G030960 Cucumis sativus L. HOM05D006752 ORTHO05D008597 7.0e-33 145.6 202 43.1
Mapoly0040s0028 Marchantia polymorpha HOM05D006752 ORTHO05D008597 1.2e-32 144.8 198 39.9
Cc08_g07650 Coffea canephora HOM05D006752 ORTHO05D008597 3.6e-29 133.3 128 53.9
MD00G1026200 Malus domestica HOM05D006752 ORTHO05D008597 2.8e-26 123.6 181 37.6
Pp3c9_1660 Physcomitrium patens HOM05D006752 ORTHO05D008597 4.1e-25 119.8 358 30.7
Pp3c9_1669 Physcomitrium patens HOM05D006752 ORTHO05D008597 4.1e-25 119.8 358 30.7
MD02G1041600 Malus domestica HOM05D006752 ORTHO05D008597 5.5e-22 109.4 138 44.2
CSS0032277 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 3.4e-19 100.1 73 61.6
CBR_g41660 Chara braunii HOM05D001740 ORTHO05D001468 7.5e-19 99.0 239 31.4
Zm00001eb336920 Zea mays HOM05D006752 ORTHO05D008597 7.5e-19 99.0 169 40.2
MD02G1038900 Malus domestica HOM05D006752 ORTHO05D008597 4.8e-18 96.3 77 58.4
MD00G1027300 Malus domestica HOM05D006752 ORTHO05D008597 3.1e-17 93.6 70 57.1
MCO09G826 Micromonas commoda HOM05D006752 ORTHO05D008597 1.7e-15 87.8 171 37.4
Cre16.g653000 Chlamydomonas reinhardtii HOM05D006752 ORTHO05D008597 1.0e-12 78.6 178 30.9
MD02G1040800 Malus domestica HOM05D006752 ORTHO05D008597 4.1e-09 66.6 72 41.7
MD02G1041100 Malus domestica HOM05D006752 ORTHO05D008597 2.0e-08 64.3 102 36.3
CSS0016306 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 1.0e-07 62.0 55 56.4
Sc08g0007040 Simmondsia chinensis HOM05D006752 ORTHO05D008597 1.0e-07 62.0 69 44.9
MD14G1152700 Malus domestica HOM05D005415 ORTHO05D006242 2.3e-07 60.8 122 33.6
Cc10_g14800 Coffea canephora HOM05D005415 ORTHO05D006242 3.8e-07 60.1 122 33.6
Ca_30697_v3 Cicer arietinum L. HOM05D006752 ORTHO05D008597 5.0e-07 59.7 61 49.2
MD02G1041500 Malus domestica HOM05D006752 ORTHO05D008597 5.0e-07 59.7 76 42.1
ECA232G0893 Erigeron canadensis HOM05D005415 ORTHO05D006242 1.9e-06 57.8 125 32.0
PGSC0003DMG400013896 Solanum tuberosum HOM05D005415 ORTHO05D006242 2.5e-06 57.4 127 32.3
Mapoly0147s0014 Marchantia polymorpha HOM05D005415 ORTHO05D006242 4.3e-06 56.6 122 30.3
Prupe.5G147700 Prunus persica HOM05D005415 ORTHO05D006242 4.3e-06 56.6 125 33.6
arahy.Tifrunner.gnm1.ann1.MQVT4E Arachis hypogaea HOM05D005415 ORTHO05D006242 5.6e-06 56.2 122 31.1
arahy.Tifrunner.gnm1.ann1.NCF6IW Arachis hypogaea HOM05D005415 ORTHO05D006242 5.6e-06 56.2 122 31.1
MD11G1046200 Malus domestica HOM05D006752 ORTHO05D008597 5.6e-06 56.2 63 41.3
SMO173G0041 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 5.6e-06 56.2 126 34.1
Atru.chr6.1849 Acer truncatum HOM05D005415 ORTHO05D006242 7.3e-06 55.8 149 29.5
SMO173G0006 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 7.3e-06 55.8 126 33.3
SMO146G0239 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 9.5e-06 55.5 126 34.1


User provided reference genes

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