Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1443 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 7.5e-58 227.3 140 100.0
CDE04G0407 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 7.3e-45 184.1 140 87.9
MSTRG.6293 Avicennia marina HOM05D005060 ORTHO05D005975 5.1e-14 81.6 147 55.8
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 1.1e-13 80.5 144 56.2
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 3.3e-13 79.0 145 60.0
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 1.3e-12 77.0 147 52.4
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 1.3e-12 77.0 133 58.6
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 1.3e-12 77.0 133 58.6
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 2.1e-12 76.3 141 57.4
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 6.3e-12 74.7 145 53.8
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 6.3e-12 74.7 135 45.9
Peaxi162Scf00153g01321 Petunia axillaris HOM05D005060 ORTHO05D005975 1.4e-11 73.6 146 51.4
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 1.8e-11 73.2 135 45.9
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 3.1e-11 72.4 132 47.0
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 4.1e-11 72.0 154 51.3
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 5.3e-11 71.6 151 49.7
Actinidia24546 Actinidia chinensis HOM05D005060 ORTHO05D005975 6.9e-11 71.2 124 57.3
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 9.0e-11 70.9 150 38.7
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 9.0e-11 70.9 127 59.1
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 1.2e-10 70.5 145 38.6
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 1.2e-10 70.5 78 73.1
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 1.2e-10 70.5 78 53.8
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 1.5e-10 70.1 138 54.3
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 1.5e-10 70.1 137 40.9
Cc06_g22810 Coffea canephora HOM05D005060 ORTHO05D005975 2.0e-10 69.7 134 53.0
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 5.9e-10 68.2 69 68.1
MBI19_g25016_MAGBIO Magnolia biondii HOM05D005060 ORTHO05D005975 1.3e-09 67.0 160 53.1
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 1.7e-09 66.6 127 37.0
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 1.7e-09 66.6 112 45.5
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 2.2e-09 66.2 143 40.6
Aqoxy1G00045 Aquilegia oxysepala HOM05D005060 ORTHO05D005975 6.5e-09 64.7 144 52.8
Cpa.g.sc33.198 Carica papaya HOM05D005060 ORTHO05D005975 8.5e-09 64.3 149 50.3
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 8.5e-09 64.3 144 49.3
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 1.4e-08 63.5 134 41.8
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 1.9e-08 63.2 161 39.8
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 3.2e-08 62.4 116 44.8
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 4.2e-08 62.0 152 40.8
Hund24512 Selenicereus undatus HOM05D005060 ORTHO05D005975 4.2e-08 62.0 145 51.7
CAN.G959.26 Capsicum annuum HOM05D005060 ORTHO05D005975 5.5e-08 61.6 115 53.0
FAN03G0591 Fragaria x ananassa HOM05D005060 ORTHO05D005975 5.5e-08 61.6 140 38.6
Gohir.A01G192800 Gossypium hirsutum HOM05D005060 ORTHO05D005975 5.5e-08 61.6 146 42.5
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 5.5e-08 61.6 129 43.4
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 5.5e-08 61.6 152 44.7
Duzib128G1851 Durio zibethinus HOM05D005060 ORTHO05D005975 7.2e-08 61.2 147 49.0
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 9.3e-08 60.8 146 42.5
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 9.3e-08 60.8 146 42.5
CSS0016899 Camellia sinensis var. sinensis HOM05D005060 ORTHO05D005975 1.2e-07 60.5 157 47.1
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 2.7e-07 59.3 70 47.1
Atru.chr1.1518 Acer truncatum HOM05D005060 ORTHO05D005975 3.6e-07 58.9 144 48.6
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 3.6e-07 58.9 141 44.0
FAN01G1650 Fragaria x ananassa HOM05D005060 ORTHO05D005975 3.6e-07 58.9 143 41.3
Gohir.A13G001200 Gossypium hirsutum HOM05D005060 ORTHO05D005975 3.6e-07 58.9 143 36.4
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 7.9e-07 57.8 77 46.8
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 7.9e-07 57.8 149 41.6
ATR0787G086 Amborella trichopoda HOM05D005060 ORTHO05D005975 1.0e-06 57.4 74 75.7
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 1.0e-06 57.4 119 42.0
Duzib093G0151 Durio zibethinus HOM05D005060 ORTHO05D005975 1.0e-06 57.4 146 41.8
PGSC0003DMG400007184 Solanum tuberosum HOM05D005060 ORTHO05D005975 1.0e-06 57.4 65 83.1
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 1.0e-06 57.4 150 34.0
Sc13g0000780 Simmondsia chinensis HOM05D005060 ORTHO05D005975 1.3e-06 57.0 69 63.8
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 1.8e-06 56.6 62 77.4
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 2.3e-06 56.2 76 52.6
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 3.9e-06 55.5 147 34.7
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 3.9e-06 55.5 146 47.3
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 3.9e-06 55.5 143 40.6
Glyma.19G124900 Glycine max HOM05D005060 ORTHO05D005975 3.9e-06 55.5 138 39.9
Sopen10g028770 Solanum pennellii HOM05D005060 ORTHO05D005975 3.9e-06 55.5 65 81.5
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 5.1e-06 55.1 147 37.4
Ah.13g077380 Amaranthus hybridus HOM05D005060 ORTHO05D005975 6.7e-06 54.7 108 46.3
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 6.7e-06 54.7 148 39.2
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 8.7e-06 54.3 137 48.9


User provided reference genes

Program Settings