Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1408 Ceratophyllum demersum HOM05D005167 ORTHO05D006312 3.7e-76 288.1 143 100.0
Nn5g27095 Nelumbo nucifera HOM05D005167 ORTHO05D006312 8.9e-38 160.6 127 60.6
Nn3g20631 Nelumbo nucifera HOM05D005167 ORTHO05D006312 7.5e-37 157.5 126 59.5
HPP92_025056 Vanilla planifolia HOM05D005167 ORTHO05D006312 9.8e-37 157.1 141 57.4
ATR0782G113 Amborella trichopoda HOM05D005167 ORTHO05D006312 1.1e-35 153.7 140 57.9
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 4.1e-35 151.8 131 59.5
CAN.G1379.23 Capsicum annuum HOM05D005167 ORTHO05D006312 1.2e-34 150.2 139 57.6
SalBow3G4053 Salvia bowleyana HOM05D005167 ORTHO05D006312 2.7e-34 149.1 143 53.1
Cpa.g.sc15.42 Carica papaya HOM05D005167 ORTHO05D006312 3.5e-34 148.7 126 57.9
Migut.N00879 Erythranthe guttata HOM05D005167 ORTHO05D006312 4.5e-34 148.3 131 55.0
Atru.chr9.69 Acer truncatum HOM05D005167 ORTHO05D006312 5.9e-34 147.9 129 56.6
Sopen01g045080 Solanum pennellii HOM05D005167 ORTHO05D006312 1.3e-33 146.7 134 56.0
Nitab4.5_0001085g0040 Nicotiana tabacum HOM05D005167 ORTHO05D006312 3.8e-33 145.2 132 57.6
SGA_v2.0_scaffold401G50971 Striga asiatica HOM05D005167 ORTHO05D006312 5.0e-33 144.8 135 54.8
Thecc.07G187300 Theobroma cacao HOM05D005167 ORTHO05D006312 5.0e-33 144.8 128 56.2
Duzib116G0260 Durio zibethinus HOM05D005167 ORTHO05D006312 6.6e-33 144.4 126 55.6
PSO170G3824 Papaver somniferum HOM05D005167 ORTHO05D006312 6.6e-33 144.4 130 58.5
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea HOM05D005167 ORTHO05D006312 8.6e-33 144.1 130 57.7
Oeu000168.1 Olea europaea HOM05D005167 ORTHO05D006312 8.6e-33 144.1 134 56.7
Lj9C241G5 Lonicera japonica HOM05D005167 ORTHO05D006312 1.1e-32 143.7 133 57.1
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea HOM05D005167 ORTHO05D006312 2.5e-32 142.5 130 57.7
Aqoxy4G01544 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 4.3e-32 141.7 145 52.4
PGSC0003DMG400018222 Solanum tuberosum HOM05D005167 ORTHO05D006312 4.3e-32 141.7 134 56.0
TWI15G0790 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 4.3e-32 141.7 129 54.3
Solyc01g102670.3 Solanum lycopersicum HOM05D005167 ORTHO05D006312 5.6e-32 141.4 134 55.2
Nitab4.5_0004176g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 7.3e-32 141.0 133 56.4
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla HOM05D005167 ORTHO05D006312 1.2e-31 140.2 129 57.4
DCAR_029460 Daucus carota HOM05D005167 ORTHO05D006312 2.1e-31 139.4 138 52.9
QL01p052835 Quercus lobata HOM05D005167 ORTHO05D006312 4.7e-31 138.3 127 56.7
Hund15261 Selenicereus undatus HOM05D005167 ORTHO05D006312 4.7e-31 138.3 125 56.0
QL93p1868_0064 Quercus lobata HOM05D005167 ORTHO05D006312 1.4e-30 136.7 127 55.9
ClCG04G000020 Citrullus lanatus HOM05D005167 ORTHO05D006312 1.8e-30 136.3 124 53.2
Manes.18G143300 Manihot esculenta HOM05D005167 ORTHO05D006312 2.3e-30 136.0 127 52.0
CiPaw.15G107300 Carya illinoinensis HOM05D005167 ORTHO05D006312 3.0e-30 135.6 135 51.1
Os07g0657600 Oryza sativa ssp. japonica HOM05D005167 ORTHO05D006312 3.0e-30 135.6 133 54.9
Gohir.D09G002700 Gossypium hirsutum HOM05D005167 ORTHO05D006312 4.0e-30 135.2 126 55.6
MD00G1096100 Malus domestica HOM05D005167 ORTHO05D006312 8.9e-30 134.0 126 54.0
Manes.06G015900 Manihot esculenta HOM05D005167 ORTHO05D006312 8.9e-30 134.0 137 53.3
SpUn0422_0010 Schrenkiella parvula HOM05D005167 ORTHO05D006312 8.9e-30 134.0 125 56.8
Sc07g0003350 Simmondsia chinensis HOM05D005167 ORTHO05D006312 8.9e-30 134.0 140 50.0
Sc07g0003360 Simmondsia chinensis HOM05D005167 ORTHO05D006312 8.9e-30 134.0 140 50.0
Carub.0003s3540 Capsella rubella HOM05D005167 ORTHO05D006312 2.0e-29 132.9 127 54.3
ClCG08G000010 Citrullus lanatus HOM05D005167 ORTHO05D006312 2.0e-29 132.9 125 52.8
Ah.02g128610 Amaranthus hybridus HOM05D005167 ORTHO05D006312 2.6e-29 132.5 142 50.0
ECA248G1565 Erigeron canadensis HOM05D005167 ORTHO05D006312 2.6e-29 132.5 147 49.0
Thhalv10028036m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 2.6e-29 132.5 128 53.1
A03p66890 Brassica napus HOM05D005167 ORTHO05D006312 5.8e-29 131.3 136 55.1
C07p02160 Brassica napus HOM05D005167 ORTHO05D006312 5.8e-29 131.3 136 55.1
BolC7t40625H Brassica oleracea HOM05D005167 ORTHO05D006312 5.8e-29 131.3 136 55.1
BraA01t02792Z Brassica rapa HOM05D005167 ORTHO05D006312 5.8e-29 131.3 136 55.1
CARHR046110 Cardamine hirsuta HOM05D005167 ORTHO05D006312 7.5e-29 131.0 136 53.7
CiPaw.09G096800 Carya illinoinensis HOM05D005167 ORTHO05D006312 1.7e-28 129.8 140 53.6
Glyma.13G026000 Glycine max HOM05D005167 ORTHO05D006312 1.7e-28 129.8 126 50.8
CANSAT64G2797 Cannabis sativa HOM05D005167 ORTHO05D006312 2.2e-28 129.4 124 45.2
PGR042G3689 Punica granatum HOM05D005167 ORTHO05D006312 2.2e-28 129.4 157 49.0
CiPaw.15G107200 Carya illinoinensis HOM05D005167 ORTHO05D006312 2.9e-28 129.0 135 49.6
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 3.7e-28 128.6 127 51.2
QL02p104239 Quercus lobata HOM05D005167 ORTHO05D006312 6.4e-28 127.9 141 51.1
Sed0010261 Sechium edule HOM05D005167 ORTHO05D006312 6.4e-28 127.9 128 53.9
EL10Ac6g13938 Beta vulgaris HOM05D005167 ORTHO05D006312 8.3e-28 127.5 129 48.8
BcaB03g16877 Brassica carinata HOM05D005167 ORTHO05D006312 8.3e-28 127.5 123 56.9
Atru.chr6.56 Acer truncatum HOM05D005167 ORTHO05D006312 1.1e-27 127.1 163 47.2
Actinidia12290 Actinidia chinensis HOM05D005167 ORTHO05D006312 1.4e-27 126.7 135 51.1
Cc02_g36800 Coffea canephora HOM05D005167 ORTHO05D006312 1.8e-27 126.3 121 57.0
Gorai.009G128100 Gossypium raimondii HOM05D005167 ORTHO05D006312 2.4e-27 125.9 140 50.0
Sopen02g001190 Solanum pennellii HOM05D005167 ORTHO05D006312 2.4e-27 125.9 126 49.2
Peaxi162Scf00194g00934 Petunia axillaris HOM05D005167 ORTHO05D006312 3.2e-27 125.6 150 47.3
Thhalv10028065m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 4.1e-27 125.2 128 50.8
Gohir.D05G124100 Gossypium hirsutum HOM05D005167 ORTHO05D006312 4.1e-27 125.2 140 49.3
Thecc.06G025200 Theobroma cacao HOM05D005167 ORTHO05D006312 4.1e-27 125.2 139 51.1
Phvul.006G133500 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 9.2e-27 124.0 140 47.1
VMungo0540G0564 Vigna mungo HOM05D005167 ORTHO05D006312 9.2e-27 124.0 142 46.5
MELO3C034515.2 Cucumis melo HOM05D005167 ORTHO05D006312 1.6e-26 123.2 132 49.2
Duzib160G0520 Durio zibethinus HOM05D005167 ORTHO05D006312 1.6e-26 123.2 145 51.0
Phvul.L001673 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 1.6e-26 123.2 133 46.6
Gohir.A05G123200 Gossypium hirsutum HOM05D005167 ORTHO05D006312 2.0e-26 122.9 140 49.3
A07p01000 Brassica napus HOM05D005167 ORTHO05D006312 3.5e-26 122.1 123 53.7
Cc00_g01280 Coffea canephora HOM05D005167 ORTHO05D006312 3.5e-26 122.1 126 47.6
Potri.003G046300 Populus trichocarpa HOM05D005167 ORTHO05D006312 4.6e-26 121.7 147 49.0
RcHm_v2.0_Chr3g0496761 Rosa chinensis HOM05D005167 ORTHO05D006312 4.6e-26 121.7 140 46.4
FAN19G3173 Fragaria x ananassa HOM05D005167 ORTHO05D006312 7.8e-26 120.9 141 50.4
FAN26G1264 Fragaria x ananassa HOM05D005167 ORTHO05D006312 7.8e-26 120.9 141 50.4
CAN.G989.3 Capsicum annuum HOM05D005167 ORTHO05D006312 1.0e-25 120.6 126 47.6
C06p19120 Brassica napus HOM05D005167 ORTHO05D006312 1.7e-25 119.8 123 53.7
BolC6t37111H Brassica oleracea HOM05D005167 ORTHO05D006312 1.7e-25 119.8 123 53.7
Rhsim05G0120900 Rhododendron simsii HOM05D005167 ORTHO05D006312 3.9e-25 118.6 123 52.0
Ciclev10001110m.g Citrus clementina HOM05D005167 ORTHO05D006312 8.6e-25 117.5 152 46.7
HanXRQChr15g0488451 Helianthus annuus HOM05D005167 ORTHO05D006312 8.6e-25 117.5 131 49.6
Sabra03G0019800 Salix brachista HOM05D005167 ORTHO05D006312 8.6e-25 117.5 148 46.6
Nitab4.5_0005690g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.1e-24 117.1 126 47.6
Prupe.4G287800 Prunus persica HOM05D005167 ORTHO05D006312 1.5e-24 116.7 113 49.6
Haze_09951 Corylus avellana HOM05D005167 ORTHO05D006312 2.5e-24 115.9 132 50.8
Glyma.09G018700 Glycine max HOM05D005167 ORTHO05D006312 2.5e-24 115.9 127 52.8
CANSAT01G2096 Cannabis sativa HOM05D005167 ORTHO05D006312 3.3e-24 115.5 153 45.8
Lj6g0014124 Lotus japonicus HOM05D005167 ORTHO05D006312 9.5e-24 114.0 150 46.0
TAR629G0123 Trochodendron aralioides HOM05D005167 ORTHO05D006312 9.5e-24 114.0 158 43.0
Eucgr.B01586 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.6e-23 113.2 142 45.1
Lsat_1_v5_gn_8_167100 Lactuca sativa HOM05D005167 ORTHO05D006312 1.6e-23 113.2 127 48.8
TWI23G0323 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 3.6e-23 112.1 142 50.0
BcaC08g44461 Brassica carinata HOM05D005167 ORTHO05D006312 6.2e-23 111.3 121 50.4
GSVIVG01029417001 Vitis vinifera HOM05D005167 ORTHO05D006312 1.1e-22 110.5 112 48.2
SGA_v2.0_scaffold150G36624 Striga asiatica HOM05D005167 ORTHO05D006312 4.0e-22 108.6 129 47.3
vmacro19812 Vaccinium macrocarpon HOM05D005167 ORTHO05D006312 4.0e-22 108.6 137 50.4
HanXRQChr12g0386151 Helianthus annuus HOM05D005167 ORTHO05D006312 3.4e-21 105.5 132 43.2
PGSC0003DMG400014526 Solanum tuberosum HOM05D005167 ORTHO05D006312 3.7e-20 102.1 113 46.9
Nitab4.5_0001246g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 8.3e-20 100.9 115 46.1
THA.LOC104809040 Tarenaya hassleriana HOM05D005167 ORTHO05D006312 8.3e-20 100.9 147 44.2
Ciclev10030405m.g Citrus clementina HOM05D005167 ORTHO05D006312 2.4e-19 99.4 117 43.6
ECA234G3362 Erigeron canadensis HOM05D005167 ORTHO05D006312 3.2e-19 99.0 139 44.6
Nitab4.5_0007926g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 5.4e-19 98.2 115 45.2
Lju225A7G63 Lonicera japonica HOM05D005167 ORTHO05D006312 4.6e-18 95.1 121 43.0
PGSC0003DMG400040448 Solanum tuberosum HOM05D005167 ORTHO05D006312 3.0e-17 92.4 113 45.1
Manes.18G143000 Manihot esculenta HOM05D005167 ORTHO05D006312 3.3e-16 89.0 113 44.2
AUR62024866 Chenopodium quinoa HOM05D005167 ORTHO05D006312 4.3e-16 88.6 71 57.7
Atru.chr6.45 Acer truncatum HOM05D005167 ORTHO05D006312 5.2e-14 81.6 118 45.8
Gohir.D07G228750 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.5e-13 80.1 125 40.0
Gorai.001G263800 Gossypium raimondii HOM05D005167 ORTHO05D006312 1.5e-13 80.1 125 40.0
QL93p0255_0001 Quercus lobata HOM05D005167 ORTHO05D006312 7.5e-13 77.8 90 46.7
Gohir.A12G103850 Gossypium hirsutum HOM05D005167 ORTHO05D006312 8.3e-12 74.3 106 40.6
TWI31G1352 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 1.9e-11 73.2 49 65.3
BcaC06g31946 Brassica carinata HOM05D005167 ORTHO05D006312 2.7e-10 69.3 48 66.7
BcaC06g31947 Brassica carinata HOM05D005167 ORTHO05D006312 2.7e-10 69.3 48 66.7
Gorai.006G003300 Gossypium raimondii HOM05D005167 ORTHO05D006312 6.0e-10 68.2 49 59.2
Gohir.A09G002900 Gossypium hirsutum HOM05D005167 ORTHO05D006312 7.8e-10 67.8 49 59.2
BcaC06g36613 Brassica carinata HOM05D005167 ORTHO05D006312 1.0e-09 67.4 48 66.7
Eucgr.G00036 Eucalyptus grandis HOM05D005167 ORTHO05D006312 3.9e-09 65.5 58 58.6
QL07p001518 Quercus lobata HOM05D005167 ORTHO05D006312 6.6e-09 64.7 54 55.6
Nn2g11162 Nelumbo nucifera HOM05D000080 ORTHO05D000053 1.1e-06 57.4 42 54.8


User provided reference genes

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