Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1298 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 2.4e-106 389.4 291 100.0
CDE11G1127 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 8.2e-99 364.4 291 93.1
CDE06G1171 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 4.4e-36 156.0 206 48.5
MBI04_g20344_MAGBIO Magnolia biondii HOM05D006310 ORTHO05D007768 7.8e-33 145.2 223 46.2
TAR629G1434 Trochodendron aralioides HOM05D006310 ORTHO05D007768 1.9e-26 124.0 222 44.6
Dinv28973 Davidia involucrata HOM05D006310 ORTHO05D007768 1.6e-25 120.9 224 38.4
Dinv25232 Davidia involucrata HOM05D006310 ORTHO05D007768 9.6e-23 111.7 223 39.5
ATR0665G126 Amborella trichopoda HOM05D006310 ORTHO05D007768 1.4e-21 107.8 230 38.3
Haze_08202 Corylus avellana HOM05D006310 ORTHO05D007768 5.3e-21 105.9 208 38.5
CSS0006923 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 1.2e-20 104.8 212 36.3
CSS0048597 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 4.5e-20 102.8 219 35.6
COL.COLO4_16996 Corchorus olitorius HOM05D006310 ORTHO05D007768 1.3e-19 101.3 216 36.1
Nn1g00145 Nelumbo nucifera HOM05D006310 ORTHO05D007768 2.2e-19 100.5 211 43.6
Cfa012467 Carpinus fangiana HOM05D006310 ORTHO05D007768 6.4e-19 99.0 207 37.2
CANSAT21G0851 Cannabis sativa HOM05D006310 ORTHO05D007768 1.9e-18 97.4 204 40.2
Gohir.A08G155500 Gossypium hirsutum HOM05D006310 ORTHO05D007768 3.2e-18 96.7 211 37.9
QL12p004739 Quercus lobata HOM05D006310 ORTHO05D007768 4.2e-18 96.3 208 37.5
Aqoxy3G02279 Aquilegia oxysepala HOM05D006310 ORTHO05D007768 5.4e-18 95.9 218 42.2
Gohir.D08G176100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.6e-17 94.4 210 37.1
Gorai.004G183900 Gossypium raimondii HOM05D006310 ORTHO05D007768 2.7e-17 93.6 209 37.3
Oeu006245.1 Olea europaea HOM05D006310 ORTHO05D007768 2.7e-17 93.6 168 39.3
Thecc.03G224800 Theobroma cacao HOM05D006310 ORTHO05D007768 4.6e-17 92.8 213 35.2
Duzib084G0468 Durio zibethinus HOM05D006310 ORTHO05D007768 7.9e-17 92.0 216 37.0
Hma1.2p1_1379F.1_g279220 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 7.9e-17 92.0 211 34.6
PGR031G3884 Punica granatum HOM05D006310 ORTHO05D007768 1.0e-16 91.7 213 42.7
Manes.15G192960 Manihot esculenta HOM05D006310 ORTHO05D007768 1.3e-16 91.3 203 41.9
PSO782G4606 Papaver somniferum HOM05D006310 ORTHO05D007768 1.3e-16 91.3 225 36.0
Duzib205G0324 Durio zibethinus HOM05D006310 ORTHO05D007768 8.7e-16 88.6 214 34.1
CiPaw.12G065800 Carya illinoinensis HOM05D006310 ORTHO05D007768 2.5e-15 87.0 176 40.3
PSO063G6445 Papaver somniferum HOM05D006310 ORTHO05D007768 2.5e-15 87.0 224 35.7
TWI15G1132 Tripterygium wilfordii HOM05D006310 ORTHO05D007768 2.5e-15 87.0 213 36.2
Hma1.2p1_0303F.1_g118950 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 4.3e-15 86.3 212 39.6
Nitab4.5_0003625g0020 Nicotiana tabacum HOM05D006310 ORTHO05D007768 3.7e-14 83.2 177 36.2
Actinidia25977 Actinidia chinensis HOM05D006310 ORTHO05D007768 4.8e-14 82.8 178 38.2
Gorai.007G033000 Gossypium raimondii HOM05D006310 ORTHO05D007768 4.8e-14 82.8 219 34.7
Potri.001G140500 Populus trichocarpa HOM05D006310 ORTHO05D007768 4.8e-14 82.8 202 35.1
Gohir.D11G030100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 8.1e-14 82.0 219 34.7
MSTRG.13750 Avicennia marina HOM05D006310 ORTHO05D007768 1.1e-13 81.6 180 32.2
Lj2A236G56 Lonicera japonica HOM05D006310 ORTHO05D007768 2.4e-13 80.5 212 38.2
DCAR_008251 Daucus carota HOM05D006310 ORTHO05D007768 3.1e-13 80.1 208 33.7
THA.LOC104827750 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 3.1e-13 80.1 208 29.8
MD06G1036900 Malus domestica HOM05D006310 ORTHO05D007768 6.9e-13 79.0 204 30.4
ClCG09G011810 Citrullus lanatus HOM05D006310 ORTHO05D007768 9.0e-13 78.6 215 32.6
Cc08_g03010 Coffea canephora HOM05D006310 ORTHO05D007768 9.0e-13 78.6 168 35.1
Atru.chr6.1649 Acer truncatum HOM05D006310 ORTHO05D007768 1.2e-12 78.2 220 30.5
Eucgr.D02211 Eucalyptus grandis HOM05D006310 ORTHO05D007768 1.2e-12 78.2 214 40.2
Lj2g0018875 Lotus japonicus HOM05D006310 ORTHO05D007768 1.2e-12 78.2 210 35.2
Sopen08g025280 Solanum pennellii HOM05D006310 ORTHO05D007768 1.2e-12 78.2 222 32.9
Actinidia03362 Actinidia chinensis HOM05D006310 ORTHO05D007768 1.5e-12 77.8 210 33.3
Glyma.09G205800 Glycine max HOM05D006310 ORTHO05D007768 2.0e-12 77.4 208 33.2
Nitab4.5_0000127g0100 Nicotiana tabacum HOM05D006310 ORTHO05D007768 2.0e-12 77.4 174 33.3
Prupe.5G032400 Prunus persica HOM05D006310 ORTHO05D007768 2.0e-12 77.4 205 29.8
THA.LOC104806719 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 2.6e-12 77.0 205 30.2
Actinidia14793 Actinidia chinensis HOM05D006310 ORTHO05D007768 3.4e-12 76.6 189 33.9
Solyc08g076730.4 Solanum lycopersicum HOM05D006310 ORTHO05D007768 3.4e-12 76.6 222 32.0
arahy.Tifrunner.gnm1.ann1.P6RCLW Arachis hypogaea HOM05D006310 ORTHO05D007768 5.8e-12 75.9 209 32.1
arahy.Tifrunner.gnm1.ann1.U64MAA Arachis hypogaea HOM05D006310 ORTHO05D007768 5.8e-12 75.9 209 32.1
CAN.G298.28 Capsicum annuum HOM05D006310 ORTHO05D007768 5.8e-12 75.9 173 35.3
PGSC0003DMG400017523 Solanum tuberosum HOM05D006310 ORTHO05D007768 5.8e-12 75.9 223 33.6
Lalb_Chr05g0215911 Lupinus albus HOM05D006310 ORTHO05D007768 7.6e-12 75.5 210 32.9
Nn3g19447 Nelumbo nucifera HOM05D006310 ORTHO05D007768 7.6e-12 75.5 212 39.6
Sabra01G0109300 Salix brachista HOM05D006310 ORTHO05D007768 7.6e-12 75.5 204 33.8
Sp7g16170 Schrenkiella parvula HOM05D006310 ORTHO05D007768 1.7e-11 74.3 219 30.6
AL7G36570 Arabidopsis lyrata HOM05D006310 ORTHO05D007768 2.9e-11 73.6 213 35.7
vmacro00314 Vaccinium macrocarpon HOM05D006310 ORTHO05D007768 3.8e-11 73.2 216 32.4
Glyma.01G017000 Glycine max HOM05D006310 ORTHO05D007768 4.9e-11 72.8 211 31.3
BraA08t33321Z Brassica rapa HOM05D006310 ORTHO05D007768 6.5e-11 72.4 206 36.9
Carub.0007s2340 Capsella rubella HOM05D006310 ORTHO05D007768 6.5e-11 72.4 159 44.0
BolC8t48532H Brassica oleracea HOM05D006310 ORTHO05D007768 8.4e-11 72.0 148 41.9
CiPaw.11G095600 Carya illinoinensis HOM05D006310 ORTHO05D007768 8.4e-11 72.0 171 35.1
GSVIVG01013133001 Vitis vinifera HOM05D006310 ORTHO05D007768 1.9e-10 70.9 90 46.7
Thhalv10026016m.g Eutrema salsugineum HOM05D006310 ORTHO05D007768 2.5e-10 70.5 152 42.1
A08p13440 Brassica napus HOM05D006310 ORTHO05D007768 3.2e-10 70.1 206 36.4
Cpa.g.sc90.63 Carica papaya HOM05D006310 ORTHO05D007768 3.2e-10 70.1 220 30.5
FvH4_5g22450 Fragaria vesca HOM05D006310 ORTHO05D007768 3.2e-10 70.1 208 28.4
FAN18G3281 Fragaria x ananassa HOM05D006310 ORTHO05D007768 5.5e-10 69.3 206 28.6
HPP92_014659 Vanilla planifolia HOM05D006310 ORTHO05D007768 5.5e-10 69.3 196 32.7
Medtr5g029910 Medicago truncatula HOM05D006310 ORTHO05D007768 9.3e-10 68.6 206 32.5
Sed0010075 Sechium edule HOM05D006310 ORTHO05D007768 9.3e-10 68.6 214 34.6
CsaV3_3G049010 Cucumis sativus L. HOM05D006310 ORTHO05D007768 1.2e-09 68.2 216 30.1
Hund14348 Selenicereus undatus HOM05D006310 ORTHO05D007768 1.2e-09 68.2 42 69.0
FAN18G0493 Fragaria x ananassa HOM05D006310 ORTHO05D007768 2.1e-09 67.4 42 66.7
BcaC07g38109 Brassica carinata HOM05D006310 ORTHO05D007768 2.7e-09 67.0 145 40.0
Gohir.A11G031400 Gossypium hirsutum HOM05D006310 ORTHO05D007768 3.5e-09 66.6 218 32.1
Actinidia09184 Actinidia chinensis HOM05D006310 ORTHO05D007768 4.6e-09 66.2 216 30.1
MELO3C003424.2 Cucumis melo HOM05D006310 ORTHO05D007768 4.6e-09 66.2 207 32.4
BcaB04g18451 Brassica carinata HOM05D006310 ORTHO05D007768 6.0e-09 65.9 143 42.0
SEGI_05061 Sequoiadendron giganteum HOM05D006310 ORTHO05D007768 6.0e-09 65.9 165 35.2
Manes.04G113400 Manihot esculenta HOM05D001903 ORTHO05D001847 1.0e-08 65.1 214 30.4
SGA_v2.0_scaffold5G02688 Striga asiatica HOM05D001903 ORTHO05D001847 1.0e-08 65.1 208 35.6
RcHm_v2.0_Chr7g0210241 Rosa chinensis HOM05D006310 ORTHO05D007768 1.8e-08 64.3 41 63.4
AT4G17940 Arabidopsis thaliana HOM05D006310 ORTHO05D007768 2.3e-08 63.9 214 36.0
FAN08G3522 Fragaria x ananassa HOM05D006310 ORTHO05D007768 2.3e-08 63.9 42 64.3
Lsat_1_v5_gn_7_107661 Lactuca sativa HOM05D001903 ORTHO05D001847 2.3e-08 63.9 218 31.7
ECA246G3187 Erigeron canadensis HOM05D006310 ORTHO05D007768 3.0e-08 63.5 43 60.5
FAN04G1670 Fragaria x ananassa HOM05D006310 ORTHO05D007768 3.0e-08 63.5 42 64.3
CARHR224680 Cardamine hirsuta HOM05D006310 ORTHO05D007768 6.7e-08 62.4 213 36.2
Psat2g137200 Pisum sativum HOM05D006310 ORTHO05D007768 6.7e-08 62.4 211 32.2
HanXRQChr10g0315611 Helianthus annuus HOM05D001903 ORTHO05D001847 8.7e-08 62.0 214 29.4
Aa31LG6G690 Aethionema arabicum HOM05D006310 ORTHO05D007768 1.1e-07 61.6 206 35.0
EL10Ac5g12081 Beta vulgaris HOM05D006310 ORTHO05D007768 1.1e-07 61.6 35 71.4
Lsat_1_v5_gn_3_18800 Lactuca sativa HOM05D006310 ORTHO05D007768 1.1e-07 61.6 39 69.2
Ca_25198_v3 Cicer arietinum L. HOM05D006310 ORTHO05D007768 1.5e-07 61.2 210 31.0
SGA_v2.0_scaffold37G14772 Striga asiatica HOM05D001903 ORTHO05D001847 1.5e-07 61.2 210 33.8
HanXRQChr06g0167641 Helianthus annuus HOM05D006310 ORTHO05D007768 1.9e-07 60.8 43 60.5
Zm00001eb024820 Zea mays HOM05D006310 ORTHO05D007768 2.5e-07 60.5 37 73.0
Cc06_g08340 Coffea canephora HOM05D001903 ORTHO05D001847 3.3e-07 60.1 219 29.2
BraA01t00942Z Brassica rapa HOM05D006310 ORTHO05D007768 4.3e-07 59.7 41 61.0
Phvul.002G140000 Phaseolus vulgaris HOM05D006310 ORTHO05D007768 4.3e-07 59.7 41 63.4
Rhsim11G0017700 Rhododendron simsii HOM05D006310 ORTHO05D007768 4.3e-07 59.7 176 31.2
SEGI_00832 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 4.3e-07 59.7 35 71.4
BcaNung00042 Brassica carinata HOM05D006310 ORTHO05D007768 5.7e-07 59.3 205 32.2
HanXRQChr17g0536151 Helianthus annuus HOM05D006310 ORTHO05D007768 5.7e-07 59.3 43 60.5
VMungo1080G0874 Vigna mungo HOM05D006310 ORTHO05D007768 5.7e-07 59.3 209 29.2
VMungo1215G2715 Vigna mungo HOM05D006310 ORTHO05D007768 5.7e-07 59.3 211 29.9
MSTRG.11137 Avicennia marina HOM05D001903 ORTHO05D001847 7.4e-07 58.9 208 33.7
SEGI_10096 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 9.6e-07 58.5 176 28.4
Lsat_1_v5_gn_5_95540 Lactuca sativa HOM05D001903 ORTHO05D001847 1.3e-06 58.2 209 34.9
SGA_v2.0_scaffold20G09266 Striga asiatica HOM05D006310 ORTHO05D007768 1.3e-06 58.2 205 27.3
Gorai.010G063200 Gossypium raimondii HOM05D001903 ORTHO05D001847 1.6e-06 57.8 214 34.1
Duzib150G0453 Durio zibethinus HOM05D001903 ORTHO05D001847 2.1e-06 57.4 212 29.7
Gohir.D06G054100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 2.1e-06 57.4 214 34.1
Migut.D01072 Erythranthe guttata HOM05D001903 ORTHO05D001847 2.8e-06 57.0 205 29.8
Thhalv10014275m.g Eutrema salsugineum HOM05D001903 ORTHO05D001847 3.7e-06 56.6 211 27.5
MD02G1030000 Malus domestica HOM05D001903 ORTHO05D001847 3.7e-06 56.6 232 34.1
SEGI_04018 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 3.7e-06 56.6 34 70.6
BcaC09g51583 Brassica carinata HOM05D006310 ORTHO05D007768 4.8e-06 56.2 147 41.5
Dinv30598 Davidia involucrata HOM05D001903 ORTHO05D001847 4.8e-06 56.2 223 34.5
QL05p029561 Quercus lobata HOM05D001903 ORTHO05D001847 4.8e-06 56.2 233 33.9
SEGI_03197 Sequoiadendron giganteum HOM05D006310 ORTHO05D007768 4.8e-06 56.2 36 63.9
SEGI_13914 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 4.8e-06 56.2 213 35.2
A01p09980 Brassica napus HOM05D006310 ORTHO05D007768 6.2e-06 55.8 41 56.1


User provided reference genes

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