Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1286 Ceratophyllum demersum HOM05D000095 ORTHO05D000393 2.5e-136 488.8 252 100.0
CDE02G2687 Ceratophyllum demersum HOM05D000095 ORTHO05D000393 5.7e-80 301.6 217 75.6
CDE09G0319 Ceratophyllum demersum HOM05D000095 ORTHO05D000393 5.7e-72 275.0 259 61.4
Duzib168G0176 Durio zibethinus HOM05D000095 ORTHO05D000393 1.2e-18 97.8 263 32.7
Psat1g048200 Pisum sativum HOM05D000095 ORTHO05D000393 3.6e-18 96.3 262 32.8
Duzib187G1917 Durio zibethinus HOM05D000095 ORTHO05D000393 6.2e-18 95.5 257 31.5
Lalb_Chr14g0375341 Lupinus albus HOM05D000095 ORTHO05D000393 1.8e-17 94.0 291 30.9
CiPaw.03G217700 Carya illinoinensis HOM05D000095 ORTHO05D000393 5.2e-17 92.4 286 32.5
GSVIVG01015223001 Vitis vinifera HOM05D000095 ORTHO05D000393 5.2e-17 92.4 241 32.4
Dinv42304 Davidia involucrata HOM05D000095 ORTHO05D000393 2.0e-16 90.5 281 32.0
MBI01_g02254_MAGBIO Magnolia biondii HOM05D000095 ORTHO05D000393 2.0e-16 90.5 235 34.0
TPR.G35497 Trifolium pratense HOM05D000095 ORTHO05D000393 7.5e-16 88.6 249 32.5
Haze_25893 Corylus avellana HOM05D000095 ORTHO05D000393 2.2e-15 87.0 291 29.9
QL02p062965 Quercus lobata HOM05D000095 ORTHO05D000393 2.2e-15 87.0 291 30.9
Thecc.09G091800 Theobroma cacao HOM05D000095 ORTHO05D000393 2.9e-15 86.7 266 33.1
Manes.03G032300 Manihot esculenta HOM05D000095 ORTHO05D000393 3.7e-15 86.3 273 31.1
TAR624G0957 Trochodendron aralioides HOM05D000095 ORTHO05D000393 1.1e-14 84.7 296 32.1
Gohir.A06G071500 Gossypium hirsutum HOM05D000095 ORTHO05D000393 1.4e-14 84.3 264 31.1
Lj2g0026427 Lotus japonicus HOM05D000095 ORTHO05D000393 1.4e-14 84.3 273 31.1
TWI63G1838 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 3.2e-14 83.2 275 31.6
Medtr6g092540 Medicago truncatula HOM05D000095 ORTHO05D000393 5.4e-14 82.4 190 35.8
vmacro17222 Vaccinium macrocarpon HOM05D000095 ORTHO05D000393 9.2e-14 81.6 274 32.8
Gorai.009G030900 Gossypium raimondii HOM05D000095 ORTHO05D000393 2.1e-13 80.5 265 32.8
Gohir.D05G030700 Gossypium hirsutum HOM05D000095 ORTHO05D000393 2.7e-13 80.1 265 32.8
VMungo0464G1470 Vigna mungo HOM05D000095 ORTHO05D000393 2.7e-13 80.1 256 33.6
Potri.006G150300 Populus trichocarpa HOM05D000095 ORTHO05D000393 3.5e-13 79.7 277 29.2
COL.COLO4_18219 Corchorus olitorius HOM05D000095 ORTHO05D000393 6.0e-13 79.0 277 31.4
Glyma.05G222600 Glycine max HOM05D000095 ORTHO05D000393 7.8e-13 78.6 248 30.2
Glyma.08G029400 Glycine max HOM05D000095 ORTHO05D000393 1.0e-12 78.2 264 30.7
TPR.G25467 Trifolium pratense HOM05D000095 ORTHO05D000393 1.0e-12 78.2 269 28.3
Gorai.010G081800 Gossypium raimondii HOM05D000095 ORTHO05D000393 1.3e-12 77.8 267 29.6
Nn6g35436 Nelumbo nucifera HOM05D000095 ORTHO05D000393 1.3e-12 77.8 310 29.0
TAR383G0327 Trochodendron aralioides HOM05D000095 ORTHO05D000393 1.3e-12 77.8 273 31.5
HanXRQChr10g0319241 Helianthus annuus HOM05D000095 ORTHO05D000393 1.7e-12 77.4 260 31.9
Lalb_Chr16g0390931 Lupinus albus HOM05D000095 ORTHO05D000393 1.7e-12 77.4 251 29.1
Rhsim05G0022500 Rhododendron simsii HOM05D000095 ORTHO05D000393 1.7e-12 77.4 270 31.9
Actinidia01193 Actinidia chinensis HOM05D000095 ORTHO05D000393 3.0e-12 76.6 270 32.6
CiPaw.04G151500 Carya illinoinensis HOM05D000095 ORTHO05D000393 3.0e-12 76.6 272 33.8
Cc06_g11200 Coffea canephora HOM05D000095 ORTHO05D000393 3.0e-12 76.6 185 35.7
Gohir.D06G070200 Gossypium hirsutum HOM05D000095 ORTHO05D000393 3.0e-12 76.6 266 29.7
GSVIVG01035363001 Vitis vinifera HOM05D000095 ORTHO05D000393 3.9e-12 76.3 174 37.4
VMungo0251G3783 Vigna mungo HOM05D000095 ORTHO05D000393 5.1e-12 75.9 238 32.4
Sabra06G0119000 Salix brachista HOM05D000095 ORTHO05D000393 6.6e-12 75.5 215 33.0
Gohir.A05G029200 Gossypium hirsutum HOM05D000095 ORTHO05D000393 8.6e-12 75.1 267 32.2
Lj4g0019928 Lotus japonicus HOM05D000095 ORTHO05D000393 8.6e-12 75.1 276 30.8
Aqoxy7G01249 Aquilegia oxysepala HOM05D000095 ORTHO05D000393 1.1e-11 74.7 210 33.3
Atru.chr7.1567 Acer truncatum HOM05D000095 ORTHO05D000393 1.9e-11 73.9 216 28.7
Actinidia30308 Actinidia chinensis HOM05D000095 ORTHO05D000393 1.9e-11 73.9 281 31.3
Eucgr.C03658 Eucalyptus grandis HOM05D000095 ORTHO05D000393 1.9e-11 73.9 253 30.4
Manes.16G079600 Manihot esculenta HOM05D000095 ORTHO05D000393 2.5e-11 73.6 279 30.5
Os05g0195700 Oryza sativa ssp. japonica HOM05D000095 ORTHO05D000393 2.5e-11 73.6 269 31.2
QL02p001345 Quercus lobata HOM05D000095 ORTHO05D000393 2.5e-11 73.6 164 35.4
Manes.16G103300 Manihot esculenta HOM05D000095 ORTHO05D000393 3.3e-11 73.2 258 30.2
Phvul.002G304400 Phaseolus vulgaris HOM05D000095 ORTHO05D000393 9.5e-11 71.6 189 33.9
Prupe.7G212300 Prunus persica HOM05D000095 ORTHO05D000393 9.5e-11 71.6 231 30.3
CSS0049647 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000393 1.2e-10 71.2 175 36.0
DCAR_011987 Daucus carota HOM05D000095 ORTHO05D000393 1.2e-10 71.2 278 28.4
Medtr8g101650 Medicago truncatula HOM05D000095 ORTHO05D000393 1.6e-10 70.9 271 29.2
Nitab4.5_0011903g0010 Nicotiana tabacum HOM05D000095 ORTHO05D000393 1.6e-10 70.9 264 29.5
Psat7g019800 Pisum sativum HOM05D000095 ORTHO05D000393 1.6e-10 70.9 241 27.8
PSO210G3938 Papaver somniferum HOM05D000095 ORTHO05D000393 2.1e-10 70.5 224 29.9
TWI34G1719 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 2.8e-10 70.1 226 32.3
Peaxi162Scf00498g00013 Petunia axillaris HOM05D000095 ORTHO05D000393 3.6e-10 69.7 196 31.6
Nn8g38903 Nelumbo nucifera HOM05D000095 ORTHO05D000393 4.7e-10 69.3 171 33.9
PSO210G6553 Papaver somniferum HOM05D000095 ORTHO05D000393 6.2e-10 68.9 216 30.1
Ciclev10009011m.g Citrus clementina HOM05D000095 ORTHO05D000393 8.1e-10 68.6 195 32.8
HanXRQChr12g0354761 Helianthus annuus HOM05D000095 ORTHO05D000393 8.1e-10 68.6 269 29.0
Lalb_Chr22g0349721 Lupinus albus HOM05D000095 ORTHO05D000393 8.1e-10 68.6 232 29.7
Phvul.004G171200 Phaseolus vulgaris HOM05D000095 ORTHO05D000393 1.8e-09 67.4 163 34.4
Sed0018412 Sechium edule HOM05D000095 ORTHO05D000393 1.8e-09 67.4 211 32.2
Dinv36752 Davidia involucrata HOM05D000095 ORTHO05D000393 2.3e-09 67.0 212 32.5
Zm00001eb161460 Zea mays HOM05D000095 ORTHO05D000393 2.3e-09 67.0 263 29.7
Nitab4.5_0004456g0060 Nicotiana tabacum HOM05D000095 ORTHO05D000393 3.1e-09 66.6 286 26.9
Solyc07g026680.2 Solanum lycopersicum HOM05D000095 ORTHO05D000393 3.1e-09 66.6 190 32.6
CSS0018279 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000393 4.0e-09 66.2 170 32.9
Hma1.2p1_0800F.1_g220010 Hydrangea macrophylla HOM05D000095 ORTHO05D000393 4.0e-09 66.2 288 30.9
MD15G1204700 Malus domestica HOM05D000095 ORTHO05D000393 5.2e-09 65.9 285 28.4
RcHm_v2.0_Chr2g0093071 Rosa chinensis HOM05D000095 ORTHO05D000393 5.2e-09 65.9 201 30.8
ATR0705G032 Amborella trichopoda HOM05D000095 ORTHO05D000393 6.8e-09 65.5 106 44.3
Os01g0192300 Oryza sativa ssp. japonica HOM05D000095 ORTHO05D000393 6.8e-09 65.5 279 28.7
TAR626G0503 Trochodendron aralioides HOM05D000095 ORTHO05D000393 6.8e-09 65.5 192 31.8
Thecc.09G052900 Theobroma cacao HOM05D000095 ORTHO05D000393 8.9e-09 65.1 277 30.3
Sed0013843 Sechium edule HOM05D000095 ORTHO05D000393 1.2e-08 64.7 177 35.0
FAN28G1723 Fragaria x ananassa HOM05D000095 ORTHO05D000393 1.5e-08 64.3 207 30.4
Hma1.2p1_0798F.1_g219700 Hydrangea macrophylla HOM05D000095 ORTHO05D000393 1.5e-08 64.3 178 33.1
Lsat_1_v5_gn_5_145621 Lactuca sativa HOM05D000095 ORTHO05D000393 1.5e-08 64.3 279 31.9
Ciclev10009128m.g Citrus clementina HOM05D000095 ORTHO05D000393 2.0e-08 63.9 292 28.1
ECA234G2422 Erigeron canadensis HOM05D000095 ORTHO05D000393 2.0e-08 63.9 200 32.0
Potri.006G230500 Populus trichocarpa HOM05D000095 ORTHO05D000393 2.0e-08 63.9 245 30.2
PGSC0003DMG400000340 Solanum tuberosum HOM05D000095 ORTHO05D000393 2.0e-08 63.9 183 35.0
FvH4_1g07170 Fragaria vesca HOM05D000095 ORTHO05D000393 2.6e-08 63.5 206 29.6
Actinidia39724 Actinidia chinensis HOM05D000095 ORTHO05D000393 3.4e-08 63.2 275 30.5
MSTRG.19526 Avicennia marina HOM05D000095 ORTHO05D000393 3.4e-08 63.2 171 32.7
MSTRG.10571 Avicennia marina HOM05D000095 ORTHO05D000393 4.4e-08 62.8 173 32.4
FAN19G0808 Fragaria x ananassa HOM05D000095 ORTHO05D000393 4.4e-08 62.8 206 29.6
FAN26G0332 Fragaria x ananassa HOM05D000095 ORTHO05D000393 4.4e-08 62.8 207 30.0
FAN26G2131 Fragaria x ananassa HOM05D000095 ORTHO05D000393 4.4e-08 62.8 207 30.0
FAN23G1718 Fragaria x ananassa HOM05D000095 ORTHO05D000393 5.8e-08 62.4 208 29.8
MD02G1076300 Malus domestica HOM05D000095 ORTHO05D000393 5.8e-08 62.4 302 28.1
Rhsim11G0044700 Rhododendron simsii HOM05D000095 ORTHO05D000393 5.8e-08 62.4 186 31.7
Sopen08g018930 Solanum pennellii HOM05D000095 ORTHO05D000393 5.8e-08 62.4 276 26.8
Thhalv10014394m.g Eutrema salsugineum HOM05D000095 ORTHO05D000393 7.6e-08 62.0 167 31.7
Solyc08g065380.3 Solanum lycopersicum HOM05D000095 ORTHO05D000393 1.7e-07 60.8 282 26.2
Glyma.04G051000 Glycine max HOM05D000095 ORTHO05D000393 2.2e-07 60.5 143 39.9
Migut.J00595 Erythranthe guttata HOM05D000095 ORTHO05D000393 3.7e-07 59.7 181 32.6
Lj1g0002759 Lotus japonicus HOM05D000095 ORTHO05D000393 3.7e-07 59.7 140 37.9
Sc15g0002110 Simmondsia chinensis HOM05D000095 ORTHO05D000393 3.7e-07 59.7 265 27.2
Zm00001eb357780 Zea mays HOM05D000095 ORTHO05D000393 3.7e-07 59.7 253 30.0
PGR142G2400 Punica granatum HOM05D000095 ORTHO05D000393 4.9e-07 59.3 266 27.1
CSS0001023 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000393 6.4e-07 58.9 217 28.6
CSS0003042 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000393 8.3e-07 58.5 217 28.6
CiPaw.01G231700 Carya illinoinensis HOM05D000095 ORTHO05D000393 8.3e-07 58.5 178 29.8
Oeu024588.1 Olea europaea HOM05D000095 ORTHO05D000393 8.3e-07 58.5 192 32.3
Hma1.2p1_0482F.1_g162580 Hydrangea macrophylla HOM05D000095 ORTHO05D000393 1.4e-06 57.8 265 26.8
Nitab4.5_0000540g0280 Nicotiana tabacum HOM05D000095 ORTHO05D000393 1.4e-06 57.8 99 41.4
Cfa003107 Carpinus fangiana HOM05D000095 ORTHO05D000393 1.9e-06 57.4 220 30.5
Sed0016361 Sechium edule HOM05D000095 ORTHO05D000393 1.9e-06 57.4 262 28.2
Sc10g0007580 Simmondsia chinensis HOM05D000095 ORTHO05D000393 2.4e-06 57.0 176 31.2
HPP92_005554 Vanilla planifolia HOM05D000095 ORTHO05D000393 2.4e-06 57.0 183 31.1
Peaxi162Scf00136g00115 Petunia axillaris HOM05D000095 ORTHO05D000393 3.2e-06 56.6 183 28.4
SGA_v2.0_scaffold28G11945 Striga asiatica HOM05D000095 ORTHO05D000393 3.2e-06 56.6 187 31.6
Lj5A53G37 Lonicera japonica HOM05D000095 ORTHO05D000393 4.1e-06 56.2 180 30.6
Hund07632 Selenicereus undatus HOM05D000095 ORTHO05D000393 4.1e-06 56.2 227 28.6
Hund07633 Selenicereus undatus HOM05D000095 ORTHO05D000393 4.1e-06 56.2 227 28.6
Carub.0008s1730 Capsella rubella HOM05D000095 ORTHO05D000393 5.4e-06 55.8 175 29.7
Nitab4.5_0001584g0120 Nicotiana tabacum HOM05D000095 ORTHO05D000393 5.4e-06 55.8 298 26.5
Eucgr.C00908 Eucalyptus grandis HOM05D000095 ORTHO05D000393 7.1e-06 55.5 299 27.1
Dinv39173 Davidia involucrata HOM05D000095 ORTHO05D000393 9.2e-06 55.1 205 28.3
Solyc12g008800.3 Solanum lycopersicum HOM05D000095 ORTHO05D000393 9.2e-06 55.1 186 32.3


User provided reference genes

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