Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1280 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 6.2e-76 287.3 142 100.0
CDE09G1352 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 1.0e-30 137.1 68 97.1
CDE09G1277 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 1.8e-27 126.3 69 91.3
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 2.7e-23 112.5 68 75.0
DCAR_022030 Daucus carota HOM05D005412 ORTHO05D006096 1.0e-22 110.5 77 72.7
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 1.8e-22 109.8 68 73.5
Nn5g30243 Nelumbo nucifera HOM05D005412 ORTHO05D006096 4.0e-22 108.6 68 76.5
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 5.2e-22 108.2 68 72.1
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 1.2e-21 107.1 68 75.0
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 1.2e-21 107.1 68 70.6
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea HOM05D005412 ORTHO05D006096 1.5e-21 106.7 68 73.5
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea HOM05D005412 ORTHO05D006096 1.5e-21 106.7 68 73.5
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 1.5e-21 106.7 68 73.5
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 1.5e-21 106.7 68 75.0
Cc02_g18700 Coffea canephora HOM05D005412 ORTHO05D006096 2.0e-21 106.3 68 72.1
Rhsim11G0166400 Rhododendron simsii HOM05D005412 ORTHO05D006096 2.0e-21 106.3 68 73.5
TAR376G0189 Trochodendron aralioides HOM05D005412 ORTHO05D006096 2.6e-21 105.9 68 72.1
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 3.4e-21 105.5 68 73.5
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 4.4e-21 105.1 68 75.0
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 4.4e-21 105.1 65 75.4
MD05G1079500 Malus domestica HOM05D005412 ORTHO05D006096 5.7e-21 104.8 67 74.6
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 5.7e-21 104.8 68 70.6
Aa31LG8G5990 Aethionema arabicum HOM05D005412 ORTHO05D006096 7.5e-21 104.4 68 70.6
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 7.5e-21 104.4 68 72.1
vmacro02202 Vaccinium macrocarpon HOM05D005412 ORTHO05D006096 7.5e-21 104.4 68 72.1
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 9.8e-21 104.0 68 72.1
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 9.8e-21 104.0 68 69.1
TPR.G30829 Trifolium pratense HOM05D005412 ORTHO05D006096 9.8e-21 104.0 68 72.1
CSS0011349 Camellia sinensis var. sinensis HOM05D005412 ORTHO05D006096 1.3e-20 103.6 68 72.1
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 1.3e-20 103.6 68 72.1
FvH4_2g06220 Fragaria vesca HOM05D005412 ORTHO05D006096 2.8e-20 102.4 65 72.3
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 2.8e-20 102.4 65 72.3
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 2.8e-20 102.4 65 72.3
Lj9C358T17 Lonicera japonica HOM05D005412 ORTHO05D006096 2.8e-20 102.4 68 72.1
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 2.8e-20 102.4 68 70.6
Nitab4.5_0003080g0090 Nicotiana tabacum HOM05D005412 ORTHO05D006096 2.8e-20 102.4 68 70.6
unitig_21.g20750 Utricularia gibba HOM05D005412 ORTHO05D006096 2.8e-20 102.4 68 69.1
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 3.7e-20 102.1 68 69.1
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 3.7e-20 102.1 68 70.6
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 3.7e-20 102.1 88 59.1
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 3.7e-20 102.1 68 69.1
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 3.7e-20 102.1 64 75.0
Dinv23623 Davidia involucrata HOM05D005412 ORTHO05D006096 4.8e-20 101.7 72 65.3
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 4.8e-20 101.7 65 70.8
FAN20G2783 Fragaria x ananassa HOM05D005412 ORTHO05D006096 4.8e-20 101.7 65 72.3
Psat7g124160 Pisum sativum HOM05D005412 ORTHO05D006096 4.8e-20 101.7 68 70.6
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 6.3e-20 101.3 68 67.6
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 6.3e-20 101.3 68 70.6
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 6.3e-20 101.3 65 70.8
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 6.3e-20 101.3 68 69.1
Actinidia00447 Actinidia chinensis HOM05D005412 ORTHO05D006096 8.3e-20 100.9 68 69.1
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 8.3e-20 100.9 67 68.7
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 1.1e-19 100.5 68 67.6
Sed0007905 Sechium edule HOM05D005412 ORTHO05D006096 1.1e-19 100.5 80 61.2
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 1.4e-19 100.1 68 66.2
Dinv23614 Davidia involucrata HOM05D005412 ORTHO05D006096 1.4e-19 100.1 72 63.9
Haze_01830 Corylus avellana HOM05D005412 ORTHO05D006096 1.8e-19 99.8 74 68.9
Eucgr.I01159 Eucalyptus grandis HOM05D005412 ORTHO05D006096 1.8e-19 99.8 68 69.1
TAR628G0752 Trochodendron aralioides HOM05D005412 ORTHO05D006096 1.8e-19 99.8 68 66.2
GSVIVG01031759001 Vitis vinifera HOM05D005412 ORTHO05D006096 1.8e-19 99.8 79 63.3
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 2.4e-19 99.4 64 73.4
Oeu025571.1 Olea europaea HOM05D005412 ORTHO05D006096 2.4e-19 99.4 68 70.6
TWI75G0165 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 3.1e-19 99.0 68 69.1
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 4.1e-19 98.6 68 67.6
HPP92_028322 Vanilla planifolia HOM05D005412 ORTHO05D006096 4.1e-19 98.6 68 69.1
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 7.0e-19 97.8 68 64.7
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 9.1e-19 97.4 69 69.6
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 1.2e-18 97.1 64 71.9
PSO210G3961 Papaver somniferum HOM05D005412 ORTHO05D006096 1.2e-18 97.1 68 63.2
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 1.2e-18 97.1 69 68.1
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 2.0e-18 96.3 69 65.2
AUR62011444 Chenopodium quinoa HOM05D005412 ORTHO05D006096 2.0e-18 96.3 68 67.6
AUR62016618 Chenopodium quinoa HOM05D005412 ORTHO05D006096 2.0e-18 96.3 68 67.6
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 2.0e-18 96.3 64 70.3
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 2.0e-18 96.3 69 68.1
HanXRQChr03g0072341 Helianthus annuus HOM05D005412 ORTHO05D006096 2.0e-18 96.3 68 67.6
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 2.0e-18 96.3 69 68.1
Dinv23622 Davidia involucrata HOM05D005412 ORTHO05D006096 2.7e-18 95.9 71 64.8
Duzib248G0232 Durio zibethinus HOM05D005412 ORTHO05D006096 2.7e-18 95.9 64 70.3
EL10Ac9g21835 Beta vulgaris HOM05D005412 ORTHO05D006096 4.5e-18 95.1 68 66.2
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 4.5e-18 95.1 68 67.6
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 4.5e-18 95.1 68 67.6
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 4.5e-18 95.1 68 67.6
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 4.5e-18 95.1 68 67.6
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 4.5e-18 95.1 68 67.6
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 4.5e-18 95.1 68 67.6
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 5.9e-18 94.7 123 45.5
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 1.3e-17 93.6 69 66.7
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 1.7e-17 93.2 65 66.2
PSO170G0229 Papaver somniferum HOM05D005412 ORTHO05D006096 2.3e-17 92.8 68 60.3
Atru.chr5.2730 Acer truncatum HOM05D005412 ORTHO05D006096 3.8e-17 92.0 65 64.6
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 5.0e-17 91.7 56 75.0
MBI02_g17325_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 5.0e-17 91.7 56 76.8
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 5.0e-17 91.7 65 64.6
PGSC0003DMG400025793 Solanum tuberosum HOM05D005412 ORTHO05D006096 8.6e-17 90.9 65 64.6
Sc14g0001650 Simmondsia chinensis HOM05D005412 ORTHO05D006096 1.1e-16 90.5 68 61.8
CsaV3_3G018530 Cucumis sativus L. HOM05D005412 ORTHO05D006096 1.5e-16 90.1 62 67.7
Actinidia00446 Actinidia chinensis HOM05D005412 ORTHO05D006096 1.9e-16 89.7 66 68.2
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 1.9e-16 89.7 69 62.3
Zm00001eb380180 Zea mays HOM05D005412 ORTHO05D006096 2.5e-16 89.4 62 69.4
Ah.02g117120 Amaranthus hybridus HOM05D005412 ORTHO05D006096 3.3e-16 89.0 68 61.8
Zm00001eb280540 Zea mays HOM05D005412 ORTHO05D006096 3.3e-16 89.0 62 69.4
Aqoxy5G01253 Aquilegia oxysepala HOM05D005412 ORTHO05D006096 7.2e-16 87.8 61 70.5
Os06g0267600 Oryza sativa ssp. japonica HOM05D005412 ORTHO05D006096 1.6e-15 86.7 61 68.9
CsaV3_3G018540 Cucumis sativus L. HOM05D005412 ORTHO05D006096 2.8e-15 85.9 66 63.6
Atru.chr5.2729 Acer truncatum HOM05D005412 ORTHO05D006096 3.6e-15 85.5 64 70.3
Lsat_1_v5_gn_9_110121 Lactuca sativa HOM05D005412 ORTHO05D006096 8.0e-15 84.3 64 65.6
Hund00331 Selenicereus undatus HOM05D005412 ORTHO05D006096 8.0e-15 84.3 64 62.5
FvH4_2g06211 Fragaria vesca HOM05D005412 ORTHO05D006096 3.0e-14 82.4 66 65.2
BcaNung06609 Brassica carinata HOM05D005412 ORTHO05D006096 8.9e-14 80.9 56 69.6
Oeu003689.1 Olea europaea HOM05D005412 ORTHO05D006096 1.2e-13 80.5 56 71.4
TPR.G30833 Trifolium pratense HOM05D005412 ORTHO05D006096 2.6e-13 79.3 64 64.1
Gohir.A03G189900 Gossypium hirsutum HOM05D005412 ORTHO05D006096 4.4e-13 78.6 62 64.5
Gohir.D02G210500 Gossypium hirsutum HOM05D005412 ORTHO05D006096 4.4e-13 78.6 62 64.5
ECA240G0709 Erigeron canadensis HOM05D005412 ORTHO05D006096 9.8e-13 77.4 60 66.7
ATR0100G063 Amborella trichopoda HOM05D005412 ORTHO05D006096 1.3e-12 77.0 64 64.1
AUR62016617 Chenopodium quinoa HOM05D005412 ORTHO05D006096 1.3e-12 77.0 66 59.1
Actinidia12956 Actinidia chinensis HOM05D005412 ORTHO05D006096 4.9e-12 75.1 62 64.5
SHI05374 Sapria himalayana HOM05D005412 ORTHO05D006096 6.3e-12 74.7 68 51.5
Mapoly0038s0067 Marchantia polymorpha HOM05D005412 ORTHO05D006096 5.4e-11 71.6 63 61.9
Oeu025573.1 Olea europaea HOM05D005412 ORTHO05D006096 3.5e-10 68.9 60 58.3
CBR_g37914 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-09 67.0 56 55.4
SEGI_28745 Sequoiadendron giganteum HOM05D005412 ORTHO05D006096 1.5e-08 63.5 57 61.4
SHI05371 Sapria himalayana HOM05D005412 ORTHO05D006096 1.6e-07 60.1 89 42.7
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis HOM05D005412 ORTHO05D006096 4.7e-07 58.5 57 49.1
MCO03G368 Micromonas commoda HOM05D005412 ORTHO05D006096 8.0e-07 57.8 55 47.3
Cre09.g408950 Chlamydomonas reinhardtii HOM05D005412 ORTHO05D006096 1.0e-06 57.4 97 41.2
Migut.B00337 Erythranthe guttata HOM05D005412 ORTHO05D006096 6.8e-06 54.7 73 41.1
Pp3c13_15610 Physcomitrium patens HOM05D005412 ORTHO05D006096 6.8e-06 54.7 56 46.4


User provided reference genes

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