Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1223 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 1.1e-56 223.0 109 100.0
CDE08G0484 Ceratophyllum demersum HOM05D003621 ORTHO05D004259 1.8e-43 179.1 90 94.4
CSS0004511 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.8e-30 136.0 90 71.1
CSS0027044 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 1.5e-29 132.9 90 71.1
TAR636G2961 Trochodendron aralioides HOM05D003621 ORTHO05D004259 9.8e-29 130.2 90 71.1
CSS0049361 Camellia sinensis var. sinensis HOM05D003621 ORTHO05D004259 2.2e-28 129.0 90 68.9
GSVIVG01015385001 Vitis vinifera HOM05D003621 ORTHO05D004259 2.2e-28 129.0 85 72.9
Cc06_g09720 Coffea canephora HOM05D003621 ORTHO05D004259 6.3e-28 127.5 85 70.6
Actinidia32682 Actinidia chinensis HOM05D003621 ORTHO05D004259 8.3e-28 127.1 90 67.8
TAR624G1386 Trochodendron aralioides HOM05D003621 ORTHO05D004259 1.1e-27 126.7 90 68.9
Prupe.7G232000 Prunus persica HOM05D003621 ORTHO05D004259 1.8e-27 125.9 106 58.5
QL02p085200 Quercus lobata HOM05D003621 ORTHO05D004259 1.8e-27 125.9 85 68.2
Oeu044981.1 Olea europaea HOM05D003621 ORTHO05D004259 3.1e-27 125.2 90 64.4
Solyc12g007100.2 Solanum lycopersicum HOM05D003621 ORTHO05D004259 3.1e-27 125.2 90 64.4
Sopen12g003080 Solanum pennellii HOM05D003621 ORTHO05D004259 3.1e-27 125.2 90 64.4
Actinidia09421 Actinidia chinensis HOM05D003621 ORTHO05D004259 5.4e-27 124.4 85 69.4
Os02g0266300 Oryza sativa ssp. japonica HOM05D003621 ORTHO05D004259 7.0e-27 124.0 90 63.3
CiPaw.04G163500 Carya illinoinensis HOM05D003621 ORTHO05D004259 9.1e-27 123.6 85 68.2
FAN26G0011 Fragaria x ananassa HOM05D003621 ORTHO05D004259 9.1e-27 123.6 107 58.9
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 9.1e-27 123.6 90 67.8
Sopen07g012210 Solanum pennellii HOM05D003621 ORTHO05D004259 9.1e-27 123.6 90 64.4
Nn8g39169 Nelumbo nucifera HOM05D003621 ORTHO05D004259 1.2e-26 123.2 106 59.4
Peaxi162Scf00231g00033 Petunia axillaris HOM05D003621 ORTHO05D004259 1.2e-26 123.2 90 64.4
Duzib187G1605 Durio zibethinus HOM05D003621 ORTHO05D004259 1.6e-26 122.9 90 66.7
Gohir.D07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.6e-26 122.9 85 68.2
Gorai.001G005600 Gossypium raimondii HOM05D003621 ORTHO05D004259 1.6e-26 122.9 85 68.2
Atru.chr7.1358 Acer truncatum HOM05D003621 ORTHO05D004259 2.0e-26 122.5 86 66.3
CAN.G1529.8 Capsicum annuum HOM05D003621 ORTHO05D004259 2.7e-26 122.1 90 62.2
COL.COLO4_34873 Corchorus olitorius HOM05D003621 ORTHO05D004259 2.7e-26 122.1 90 66.7
Migut.J01155 Erythranthe guttata HOM05D003621 ORTHO05D004259 3.5e-26 121.7 90 64.4
FvH4_1g04710 Fragaria vesca HOM05D003621 ORTHO05D004259 3.5e-26 121.7 107 58.9
FAN28G1412 Fragaria x ananassa HOM05D003621 ORTHO05D004259 3.5e-26 121.7 107 58.9
Hma1.2p1_0018F.1_g013590 Hydrangea macrophylla HOM05D003621 ORTHO05D004259 3.5e-26 121.7 90 66.7
Lj2g0018985 Lotus japonicus HOM05D003621 ORTHO05D004259 3.5e-26 121.7 90 63.3
EL10Ac8g18488 Beta vulgaris HOM05D003621 ORTHO05D004259 4.5e-26 121.3 89 65.2
AUR62010986 Chenopodium quinoa HOM05D003621 ORTHO05D004259 4.5e-26 121.3 85 65.9
PGSC0003DMG400000311 Solanum tuberosum HOM05D003621 ORTHO05D004259 4.5e-26 121.3 90 62.2
AUR62021495 Chenopodium quinoa HOM05D003621 ORTHO05D004259 5.9e-26 120.9 85 65.9
PGSC0003DMG400030220 Solanum tuberosum HOM05D003621 ORTHO05D004259 5.9e-26 120.9 83 67.5
Potri.018G081000 Populus trichocarpa HOM05D003621 ORTHO05D004259 1.3e-25 119.8 85 64.7
Glyma.09G191100 Glycine max HOM05D003621 ORTHO05D004259 1.7e-25 119.4 85 64.7
MD02G1046000 Malus domestica HOM05D003621 ORTHO05D004259 1.7e-25 119.4 106 58.5
Ciclev10008142m.g Citrus clementina HOM05D003621 ORTHO05D004259 2.3e-25 119.0 90 62.2
Glyma.07G085800 Glycine max HOM05D003621 ORTHO05D004259 2.3e-25 119.0 85 64.7
Zm00001eb204000 Zea mays HOM05D003621 ORTHO05D004259 2.3e-25 119.0 106 57.5
CiPaw.03G231600 Carya illinoinensis HOM05D003621 ORTHO05D004259 2.9e-25 118.6 85 63.5
Medtr6g088470 Medicago truncatula HOM05D003621 ORTHO05D004259 2.9e-25 118.6 90 63.3
Haze_25724 Corylus avellana HOM05D003621 ORTHO05D004259 3.8e-25 118.2 85 67.1
Haze_25731 Corylus avellana HOM05D003621 ORTHO05D004259 3.8e-25 118.2 85 67.1
MD15G1184200 Malus domestica HOM05D003621 ORTHO05D004259 3.8e-25 118.2 106 56.6
VMungo0464G0841 Vigna mungo HOM05D003621 ORTHO05D004259 3.8e-25 118.2 85 65.9
PSO782G0111 Papaver somniferum HOM05D003621 ORTHO05D004259 5.0e-25 117.9 92 65.2
PSO832G1684 Papaver somniferum HOM05D003621 ORTHO05D004259 5.0e-25 117.9 92 65.2
Peaxi162Scf00546g00023 Petunia axillaris HOM05D003621 ORTHO05D004259 6.5e-25 117.5 85 62.4
Phvul.004G163800 Phaseolus vulgaris HOM05D003621 ORTHO05D004259 6.5e-25 117.5 85 64.7
MSTRG.19588 Avicennia marina HOM05D003621 ORTHO05D004259 8.6e-25 117.1 83 67.5
Cpa.g.sc23.101 Carica papaya HOM05D003621 ORTHO05D004259 8.6e-25 117.1 85 68.2
Duzib168G1477 Durio zibethinus HOM05D003621 ORTHO05D004259 8.6e-25 117.1 85 64.7
Nitab4.5_0005947g0020 Nicotiana tabacum HOM05D003621 ORTHO05D004259 8.6e-25 117.1 85 61.2
SGA_v2.0_scaffold30G12371 Striga asiatica HOM05D003621 ORTHO05D004259 8.6e-25 117.1 83 65.1
Thecc.09G109600 Theobroma cacao HOM05D003621 ORTHO05D004259 8.6e-25 117.1 85 67.1
Gohir.A13G196700 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.1e-24 116.7 85 65.9
Gorai.013G230900 Gossypium raimondii HOM05D003621 ORTHO05D004259 1.1e-24 116.7 85 65.9
ClCG05G007150 Citrullus lanatus HOM05D003621 ORTHO05D004259 1.5e-24 116.3 85 67.1
Potri.006G158600 Populus trichocarpa HOM05D003621 ORTHO05D004259 2.5e-24 115.5 82 64.6
CsaV3_3G015870 Cucumis sativus L. HOM05D003621 ORTHO05D004259 7.2e-24 114.0 85 64.7
Aqoxy7G01646 Aquilegia oxysepala HOM05D003621 ORTHO05D004259 9.5e-24 113.6 91 61.5
MELO3C006786.2 Cucumis melo HOM05D003621 ORTHO05D004259 9.5e-24 113.6 85 64.7
Gohir.D13G202000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 9.5e-24 113.6 85 64.7
RhsimUnG0196500 Rhododendron simsii HOM05D003621 ORTHO05D004259 9.5e-24 113.6 107 55.1
Gohir.A07G006000 Gossypium hirsutum HOM05D003621 ORTHO05D004259 1.2e-23 113.2 81 66.7
HanXRQChr10g0318561 Helianthus annuus HOM05D003621 ORTHO05D004259 1.2e-23 113.2 90 61.1
TPR.G25311 Trifolium pratense HOM05D003621 ORTHO05D004259 2.1e-23 112.5 90 62.2
Eucgr.C01036 Eucalyptus grandis HOM05D003621 ORTHO05D004259 2.8e-23 112.1 84 64.3
Sabra18G0068200 Salix brachista HOM05D003621 ORTHO05D004259 2.8e-23 112.1 93 59.1
Sed0020967 Sechium edule HOM05D003621 ORTHO05D004259 2.8e-23 112.1 105 55.2
DCAR_028707 Daucus carota HOM05D003621 ORTHO05D004259 4.7e-23 111.3 85 61.2
ATR0315G144 Amborella trichopoda HOM05D003621 ORTHO05D004259 6.1e-23 110.9 80 65.0
arahy.Tifrunner.gnm1.ann1.EYQI1F Arachis hypogaea HOM05D003621 ORTHO05D004259 6.1e-23 110.9 86 60.5
arahy.Tifrunner.gnm1.ann1.VSCA53 Arachis hypogaea HOM05D003621 ORTHO05D004259 6.1e-23 110.9 86 60.5
Nitab4.5_0002904g0090 Nicotiana tabacum HOM05D003621 ORTHO05D004259 6.1e-23 110.9 110 52.7
Ah.14g082090 Amaranthus hybridus HOM05D003621 ORTHO05D004259 1.4e-22 109.8 85 63.5
RcHm_v2.0_Chr2g0090311 Rosa chinensis HOM05D003621 ORTHO05D004259 1.8e-22 109.4 86 62.8
HPP92_005264 Vanilla planifolia HOM05D003621 ORTHO05D004259 4.0e-22 108.2 88 53.4
Lalb_Chr14g0371541 Lupinus albus HOM05D003621 ORTHO05D004259 5.2e-22 107.8 80 62.5
Hund09208 Selenicereus undatus HOM05D003621 ORTHO05D004259 1.5e-21 106.3 80 65.0
Lsat_1_v5_gn_7_40780 Lactuca sativa HOM05D003621 ORTHO05D004259 4.4e-21 104.8 82 58.5
HanXRQChr09g0239661 Helianthus annuus HOM05D003621 ORTHO05D004259 5.7e-21 104.4 84 56.0
PGR142G3711 Punica granatum HOM05D003621 ORTHO05D004259 7.5e-21 104.0 82 61.0
BcaB06g26656 Brassica carinata HOM05D003621 ORTHO05D004259 9.8e-21 103.6 85 61.2
Hund26199 Selenicereus undatus HOM05D003621 ORTHO05D004259 9.8e-21 103.6 81 59.3
BcaC06g35719 Brassica carinata HOM05D003621 ORTHO05D004259 2.8e-20 102.1 80 62.5
C07p11700 Brassica napus HOM05D003621 ORTHO05D004259 2.8e-20 102.1 80 62.5
BolC7t41643H Brassica oleracea HOM05D003621 ORTHO05D004259 2.8e-20 102.1 80 62.5
BraA07t28569Z Brassica rapa HOM05D003621 ORTHO05D004259 4.9e-20 101.3 85 58.8
SEGI_35600 Sequoiadendron giganteum HOM05D003621 ORTHO05D004259 8.3e-20 100.5 78 61.5
A07p07780 Brassica napus HOM05D003621 ORTHO05D004259 1.1e-19 100.1 85 57.6
Thhalv10002506m.g Eutrema salsugineum HOM05D003621 ORTHO05D004259 1.4e-19 99.8 84 58.3
Lalb_Chr24g0397591 Lupinus albus HOM05D003621 ORTHO05D004259 1.4e-19 99.8 79 57.0
SGA_v2.0_scaffold10G05155 Striga asiatica HOM05D003621 ORTHO05D004259 1.4e-19 99.8 85 54.1
Sp3g22320 Schrenkiella parvula HOM05D003621 ORTHO05D004259 1.8e-19 99.4 84 58.3
Aa31sc29G80 Aethionema arabicum HOM05D003621 ORTHO05D004259 3.1e-19 98.6 84 57.1
AL3G40070 Arabidopsis lyrata HOM05D003621 ORTHO05D004259 5.4e-19 97.8 80 60.0
THA.LOC104808764 Tarenaya hassleriana HOM05D003621 ORTHO05D004259 5.4e-19 97.8 81 56.8
TWI34G1138 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 7.0e-19 97.4 80 62.5
AT3G24530 Arabidopsis thaliana HOM05D003621 ORTHO05D004259 1.2e-18 96.7 80 58.8
Carub.0003s2492 Capsella rubella HOM05D003621 ORTHO05D004259 1.2e-18 96.7 80 58.8
CARHR100670 Cardamine hirsuta HOM05D003621 ORTHO05D004259 1.2e-18 96.7 80 58.8
TWI63G0694 Tripterygium wilfordii HOM05D003621 ORTHO05D004259 2.0e-18 95.9 80 62.5
Manes.03G021400 Manihot esculenta HOM05D003621 ORTHO05D004259 3.5e-18 95.1 73 60.3
Aa31sc99G150 Aethionema arabicum HOM05D003621 ORTHO05D004259 7.8e-18 94.0 81 53.1
ECA240G2782 Erigeron canadensis HOM05D003621 ORTHO05D004259 1.0e-17 93.6 78 56.4
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.3e-17 93.2 76 56.6
SHI02763 Sapria himalayana HOM05D003621 ORTHO05D004259 1.7e-17 92.8 80 52.5
Migut.J01110 Erythranthe guttata HOM05D003621 ORTHO05D004259 8.6e-17 90.5 88 50.0
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 1.6e-15 86.3 93 49.5
vmacro06217 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 6.1e-15 84.3 45 82.2
Nn2g11728 Nelumbo nucifera HOM05D003621 ORTHO05D004259 2.3e-14 82.4 44 79.5
Solyc07g023990.3 Solanum lycopersicum HOM05D003621 ORTHO05D004259 4.0e-14 81.6 45 75.6
Oeu023080.1 Olea europaea HOM05D003621 ORTHO05D004259 6.8e-14 80.9 44 77.3
FAN19G2426 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.5e-13 79.7 61 62.3
FAN23G2072 Fragaria x ananassa HOM05D003621 ORTHO05D004259 1.5e-13 79.7 61 62.3
Cfa021562 Carpinus fangiana HOM05D003621 ORTHO05D004259 2.6e-13 79.0 90 48.9
Lj7A651T32 Lonicera japonica HOM05D003621 ORTHO05D004259 4.4e-13 78.2 44 72.7
Sc08g0007530 Simmondsia chinensis HOM05D003621 ORTHO05D004259 4.4e-13 78.2 44 72.7
TAR376G0449 Trochodendron aralioides HOM05D003621 ORTHO05D004259 5.8e-13 77.8 44 75.0
Nn8g39160 Nelumbo nucifera HOM05D003621 ORTHO05D004259 7.5e-13 77.4 59 62.7
SalBow6G3888 Salvia bowleyana HOM05D003621 ORTHO05D004259 9.8e-13 77.0 70 48.6
SalBow6G5466 Salvia bowleyana HOM05D003621 ORTHO05D000122 1.3e-12 76.6 78 43.6
vmacro10501 Vaccinium macrocarpon HOM05D003621 ORTHO05D004259 1.3e-12 76.6 45 75.6
Ca_03977_v3 Cicer arietinum L. HOM05D003621 ORTHO05D004259 2.2e-12 75.9 44 72.7
Dinv36637 Davidia involucrata HOM05D003621 ORTHO05D004259 2.9e-12 75.5 50 62.0
SalBow6G2522 Salvia bowleyana HOM05D003621 ORTHO05D004259 8.3e-12 73.9 83 41.0
AagrBONN_evm.TU.Sc2ySwM_368.1977 Anthoceros agrestis HOM05D003621 ORTHO05D004259 1.4e-11 73.2 89 40.4
Nitab4.5_0004562g0010 Nicotiana tabacum HOM05D003621 ORTHO05D004259 3.2e-11 72.0 41 73.2
SalBow6G6039 Salvia bowleyana HOM05D003621 ORTHO05D004259 3.5e-10 68.6 76 43.4
SalBow6G4774 Salvia bowleyana HOM05D003621 ORTHO05D004259 7.8e-10 67.4 76 42.1
Psat1g042960 Pisum sativum HOM05D003621 ORTHO05D004259 3.0e-09 65.5 41 65.9
unitig_22.g6628 Utricularia gibba HOM05D003621 ORTHO05D004259 3.0e-09 65.5 39 71.8
Migut.J01113 Erythranthe guttata HOM05D003621 ORTHO05D004259 5.0e-09 64.7 41 65.9
Nn8g39168 Nelumbo nucifera HOM05D003621 ORTHO05D004259 5.0e-09 64.7 38 73.7
Migut.J01147 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.6e-07 59.7 44 56.8
Manes.16G115500 Manihot esculenta HOM05D003621 ORTHO05D004259 1.6e-07 59.7 104 35.6
Oeu064901.1 Olea europaea HOM05D003621 ORTHO05D004259 1.4e-06 56.6 38 68.4


User provided reference genes

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