Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 0.0e+00 2861.6 1427 100.0
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 0.0e+00 1379.8 1566 50.4
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 0.0e+00 1338.2 1577 49.1
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 0.0e+00 1314.7 1536 48.6
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 0.0e+00 1307.7 1541 49.6
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 0.0e+00 1293.5 1533 49.8
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1287.7 1534 48.0
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 0.0e+00 1285.8 1540 48.6
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 0.0e+00 1283.5 1523 48.5
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 0.0e+00 1283.1 1550 48.4
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 0.0e+00 1280.4 1540 48.8
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 0.0e+00 1279.2 1531 48.9
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 0.0e+00 1279.2 1535 48.1
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 0.0e+00 1276.5 1553 47.7
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 0.0e+00 1274.2 1522 48.2
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 0.0e+00 1273.1 1568 48.0
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 0.0e+00 1268.4 1527 48.1
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 0.0e+00 1268.4 1494 49.1
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 0.0e+00 1255.7 1535 47.8
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 0.0e+00 1255.0 1486 48.4
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 0.0e+00 1253.8 1533 47.7
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1251.9 1553 47.1
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1244.2 1530 47.8
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1243.4 1474 48.4
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 0.0e+00 1243.4 1428 49.6
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 0.0e+00 1243.0 1519 47.8
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 0.0e+00 1241.1 1529 47.4
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 0.0e+00 1236.9 1536 47.2
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 0.0e+00 1234.9 1455 49.1
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 0.0e+00 1232.2 1536 47.1
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 0.0e+00 1224.5 1572 46.8
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 0.0e+00 1220.3 1460 48.7
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 0.0e+00 1219.1 1535 45.7
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 0.0e+00 1216.8 1539 47.0
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1216.1 1633 44.7
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 0.0e+00 1215.3 1589 45.6
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 0.0e+00 1212.6 1542 46.1
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 0.0e+00 1209.1 1509 47.7
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 0.0e+00 1208.4 1522 46.1
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 0.0e+00 1206.8 1517 46.9
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 0.0e+00 1206.8 1569 45.0
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 0.0e+00 1206.0 1540 46.3
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 0.0e+00 1198.3 1536 45.8
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 0.0e+00 1196.4 1544 45.7
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 0.0e+00 1196.0 1580 46.3
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 0.0e+00 1187.9 1542 45.3
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1186.0 1538 46.0
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 0.0e+00 1180.2 1523 46.0
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 0.0e+00 1177.2 1624 44.2
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 0.0e+00 1176.0 1547 45.1
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1175.2 1483 46.6
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1174.1 1512 46.0
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 0.0e+00 1173.3 1531 45.5
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1172.9 1512 45.8
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 0.0e+00 1172.5 1513 46.1
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 0.0e+00 1172.5 1513 46.1
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 0.0e+00 1171.8 1534 45.7
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 0.0e+00 1171.8 1533 45.7
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 0.0e+00 1171.4 1539 44.9
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 0.0e+00 1170.2 1537 45.9
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 0.0e+00 1167.5 1531 45.5
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 0.0e+00 1166.4 1531 45.9
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 0.0e+00 1165.6 1532 45.6
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1165.2 1525 45.1
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 0.0e+00 1163.7 1502 45.3
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 0.0e+00 1162.5 1537 45.9
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 0.0e+00 1162.1 1555 45.0
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 0.0e+00 1161.0 1484 46.0
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 0.0e+00 1157.1 1530 45.4
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 0.0e+00 1153.7 1493 45.5
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1151.0 1536 44.5
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1150.6 1533 45.3
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 0.0e+00 1149.4 1507 45.7
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 0.0e+00 1147.1 1543 44.1
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 0.0e+00 1143.6 1537 44.6
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 0.0e+00 1142.9 1524 45.1
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 0.0e+00 1130.2 1517 44.8
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1120.5 1535 44.2
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 0.0e+00 1118.2 1444 46.5
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 0.0e+00 1117.8 1595 43.4
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 0.0e+00 1108.2 1524 44.0
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 0.0e+00 1108.2 1505 44.1
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 0.0e+00 1106.7 1529 43.4
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 0.0e+00 1097.0 1536 43.8
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 0.0e+00 1080.9 1546 41.7
Oeu059571.2 Olea europaea HOM05D006693 ORTHO05D008092 0.0e+00 1075.8 1555 43.8
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 8.4e-306 1054.3 1329 47.8
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 3.1e-300 1035.8 1409 43.9
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 2.9e-298 1029.2 1125 50.3
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 5.1e-287 991.9 1529 41.3
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 5.7e-286 988.4 1160 49.1
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 1.6e-283 980.3 1084 50.4
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 6.5e-282 974.9 1351 43.4
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.9e-281 973.4 1367 43.7
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 2.7e-272 943.0 1489 41.4
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 7.3e-241 838.6 1599 36.3
COL.COLO4_08357 Corchorus olitorius HOM05D006693 ORTHO05D008092 6.3e-184 649.4 1006 40.2
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 2.3e-170 604.4 1431 31.2
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 1.5e-153 548.5 481 59.9
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 1.3e-152 545.4 482 60.4
CARHR255320 Cardamine hirsuta HOM05D006693 ORTHO05D008092 1.4e-143 515.4 919 38.0
SEGI_35152 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 2.1e-131 474.9 1035 33.2
Os06g0331300 Oryza sativa ssp. japonica HOM05D006693 ORTHO05D008092 1.8e-122 445.3 664 40.1
Cpa.g.sc180.1 Carica papaya HOM05D006693 ORTHO05D008092 1.1e-84 319.7 386 47.4
SEGI_07995 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 2.3e-53 215.7 295 41.0
FAN08G3186 Fragaria x ananassa HOM05D006693 ORTHO05D008092 1.7e-43 183.0 191 49.2
Cpa.g.sc180.2 Carica papaya HOM05D006693 ORTHO05D008092 1.7e-35 156.4 168 55.4
ClCG07G007840 Citrullus lanatus HOM05D006693 ORTHO05D008092 2.9e-32 145.6 105 63.8
Cpa.g.sc180.5 Carica papaya HOM05D006693 ORTHO05D008092 5.4e-26 124.8 91 59.3
Actinidia27361 Actinidia chinensis HOM05D006693 ORTHO05D008092 5.2e-21 108.2 81 61.7
Cpa.g.sc180.3 Carica papaya HOM05D006693 ORTHO05D008092 8.9e-21 107.5 81 64.2
SEGI_11223 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 1.5e-20 106.7 86 62.8
SEGI_38420 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 1.5e-20 106.7 86 62.8
Cpa.g.c42974 Carica papaya HOM05D006693 ORTHO05D008092 7.5e-20 104.4 88 56.8
CAN.G532.47 Capsicum annuum HOM05D006693 ORTHO05D008092 9.8e-20 104.0 89 55.1
Actinidia33728 Actinidia chinensis HOM05D006693 ORTHO05D008092 5.0e-16 91.7 67 71.6
MCO04G335 Micromonas commoda HOM05D006693 ORTHO05D008092 3.0e-08 65.9 143 28.7


User provided reference genes

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