Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 1.1e-245 852.8 431 100.0
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 1.8e-105 387.1 211 88.2
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 9.1e-62 241.9 500 37.4
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 5.5e-59 232.6 494 38.7
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 2.1e-58 230.7 485 36.7
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 8.8e-57 225.3 507 34.9
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 1.4e-54 218.0 489 35.2
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 3.1e-54 216.9 483 36.6
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 3.1e-54 216.9 483 36.6
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 7.0e-54 215.7 449 37.9
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 1.2e-53 214.9 458 37.1
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 1.9e-51 207.6 500 35.0
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 4.7e-50 203.0 501 34.1
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 1.4e-49 201.4 504 34.5
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 5.2e-49 199.5 497 34.2
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 1.2e-48 198.4 502 33.7
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 1.5e-48 198.0 499 35.1
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 2.0e-48 197.6 505 34.3
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 5.7e-48 196.1 479 34.9
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 7.5e-48 195.7 488 33.6
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 9.8e-48 195.3 492 32.9
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 1.3e-47 194.9 499 34.7
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 2.2e-47 194.1 496 33.3
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 3.7e-47 193.4 433 36.0
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 4.9e-47 193.0 491 34.0
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 8.3e-47 192.2 485 34.6
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 8.3e-47 192.2 491 33.4
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 1.1e-46 191.8 491 33.4
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 1.1e-46 191.8 459 34.4
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 1.8e-46 191.0 497 33.0
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 5.4e-46 189.5 452 33.6
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 9.1e-46 188.7 464 35.6
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 4.5e-45 186.4 512 30.3
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 4.5e-45 186.4 528 31.4
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 7.7e-45 185.7 527 32.1
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 2.9e-44 183.7 465 34.4
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 3.8e-44 183.3 472 35.4
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 6.6e-44 182.6 493 32.9
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 1.5e-43 181.4 489 32.3
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 1.5e-43 181.4 497 32.8
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 2.8e-42 177.2 442 35.3
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 1.0e-41 175.3 493 31.0
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 1.8e-41 174.5 494 33.4
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 2.3e-41 174.1 476 32.4
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 6.8e-41 172.6 470 32.8
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 8.9e-41 172.2 498 32.7
CDE04G1568 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 1.5e-40 171.4 99 88.9
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 2.0e-40 171.0 404 33.4
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 2.6e-40 170.6 489 32.7
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 5.7e-40 169.5 473 32.8
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 9.8e-40 168.7 452 34.3
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 1.7e-39 167.9 507 31.0
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 2.2e-39 167.5 533 30.6
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 4.9e-39 166.4 471 32.5
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 6.3e-39 166.0 484 33.5
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.1e-38 165.2 484 33.3
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 1.1e-38 165.2 484 33.3
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 1.4e-38 164.9 490 30.8
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 3.2e-38 163.7 477 32.3
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 5.4e-38 162.9 447 31.5
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 7.0e-38 162.5 438 33.6
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 9.2e-38 162.2 453 33.3
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 1.6e-37 161.4 442 33.3
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.0e-37 161.0 427 34.0
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.7e-37 160.6 477 32.1
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 3.5e-37 160.2 457 31.9
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 5.9e-37 159.5 552 31.2
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 5.0e-36 156.4 449 29.4
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 5.0e-36 156.4 457 31.1
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 6.6e-36 156.0 466 32.2
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 6.6e-36 156.0 402 32.6
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 6.6e-36 156.0 472 32.4
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 1.1e-35 155.2 454 32.8
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 1.1e-35 155.2 454 32.8
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.1e-35 155.2 532 30.5
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 1.5e-35 154.8 422 30.1
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 2.5e-35 154.1 423 30.5
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 1.2e-34 151.8 435 30.3
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 1.2e-34 151.8 462 31.6
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 3.6e-34 150.2 429 32.9
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 4.7e-34 149.8 436 33.0
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 6.2e-34 149.4 450 32.0
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 3.1e-33 147.1 552 29.0
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 5.2e-33 146.4 446 28.5
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 5.2e-33 146.4 441 32.9
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 1.2e-32 145.2 489 31.7
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 2.0e-32 144.4 439 28.5
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 2.6e-32 144.1 436 30.0
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 9.8e-32 142.1 490 29.8
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 1.7e-31 141.4 496 30.8
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 6.4e-31 139.4 459 28.5
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 1.1e-30 138.7 448 28.6
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 1.1e-30 138.7 552 28.8
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 1.4e-30 138.3 444 30.9
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 1.4e-30 138.3 525 28.8
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 3.2e-30 137.1 333 33.6
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 7.0e-30 136.0 531 28.6
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 6.0e-29 132.9 445 29.7
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 2.3e-28 131.0 445 29.4
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 2.3e-28 131.0 445 29.4
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 2.3e-28 131.0 445 29.4
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 8.6e-28 129.0 501 27.7
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 5.6e-27 126.3 395 28.6
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 3.1e-25 120.6 446 30.3
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 5.8e-24 116.3 455 29.7
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 1.9e-22 111.3 487 27.3
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 1.5e-19 101.7 448 28.6
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 5.6e-19 99.8 252 32.1
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 1.3e-15 88.6 315 29.5
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 3.7e-15 87.0 232 33.6
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 1.9e-14 84.7 141 38.3
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 2.1e-13 81.3 260 31.2
BcaC01g04588 Brassica carinata HOM05D006741 ORTHO05D008434 1.9e-06 58.2 207 25.1
unitig_748.g7441 Utricularia gibba HOM05D006741 ORTHO05D008434 3.2e-06 57.4 174 30.5


User provided reference genes

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