Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 1.3e-249 865.9 421 100.0
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 1.9e-197 692.6 423 75.4
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 5.2e-195 684.5 424 74.1
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 9.2e-192 673.7 424 73.1
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 3.5e-191 671.8 421 72.7
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 1.0e-190 670.2 421 72.7
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 1.3e-190 669.8 422 73.0
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 8.6e-190 667.2 421 72.2
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.9e-189 666.0 399 74.7
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 9.5e-189 663.7 422 71.3
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.8e-188 662.1 423 71.6
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 8.0e-188 660.6 423 71.9
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 1.8e-187 659.4 425 70.8
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 2.3e-187 659.1 424 71.0
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 2.3e-187 659.1 424 71.0
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 1.7e-185 652.9 424 70.8
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 4.9e-185 651.4 410 71.7
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 4.9e-185 651.4 425 69.6
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 6.4e-185 651.0 425 69.4
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 8.3e-185 650.6 407 71.3
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.1e-184 650.2 413 72.2
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 2.4e-184 649.0 422 69.7
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 4.1e-184 648.3 426 69.2
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 4.1e-184 648.3 418 69.9
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 2.0e-183 646.0 424 69.1
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 3.0e-182 642.1 427 67.9
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 3.0e-182 642.1 420 69.5
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 3.0e-182 642.1 422 68.5
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 3.9e-182 641.7 422 69.4
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 5.0e-182 641.3 425 67.1
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 8.6e-182 640.6 421 68.4
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 1.1e-181 640.2 412 70.1
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.1e-181 640.2 411 70.1
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.5e-181 639.8 420 68.8
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 2.5e-181 639.0 422 67.5
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 4.3e-181 638.3 412 68.9
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 7.3e-181 637.5 420 69.0
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.2e-180 636.7 425 66.8
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 2.1e-180 636.0 412 70.6
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 2.1e-180 636.0 422 67.3
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 6.2e-180 634.4 406 70.2
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 1.1e-179 633.6 418 67.2
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 5.2e-179 631.3 423 68.1
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.2e-178 630.2 423 66.7
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 3.4e-178 628.6 423 67.8
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 5.8e-178 627.9 423 67.8
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 5.8e-178 627.9 418 66.7
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 9.8e-178 627.1 424 68.4
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 2.9e-177 625.5 417 66.9
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 4.9e-177 624.8 419 68.3
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 2.4e-176 622.5 423 67.4
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 3.2e-176 622.1 423 67.4
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 4.1e-176 621.7 423 66.7
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 7.0e-176 620.9 423 67.4
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 7.0e-176 620.9 405 68.1
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 9.2e-176 620.5 423 67.4
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 1.2e-175 620.2 423 67.8
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.6e-175 619.8 423 66.9
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.6e-175 619.8 423 66.7
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 1.6e-175 619.8 422 67.1
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 2.7e-175 619.0 423 67.4
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.3e-174 616.7 414 67.9
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 3.9e-174 615.1 450 63.1
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 6.6e-174 614.4 425 66.4
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 8.6e-174 614.0 422 65.6
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.1e-173 613.6 424 65.8
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.5e-173 613.2 382 70.4
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 7.3e-173 610.9 418 67.7
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.2e-172 610.1 419 67.8
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.8e-172 609.0 410 68.5
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 8.1e-172 607.4 425 66.8
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.1e-171 607.1 421 66.5
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 4.0e-171 605.1 422 65.2
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 6.8e-171 604.4 425 67.1
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 1.7e-169 599.7 402 68.2
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 7.8e-167 590.9 412 64.8
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.3e-166 589.3 420 65.2
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 8.6e-166 587.4 408 64.2
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.2e-164 583.6 540 53.5
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.2e-161 572.8 414 64.5
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 2.4e-160 569.3 399 64.7
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 3.2e-160 568.9 436 61.9
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 2.1e-156 556.2 468 58.3
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 5.8e-154 548.1 410 64.1
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 3.8e-153 545.4 455 58.0
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.5e-146 523.5 410 60.2
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 2.0e-146 523.1 384 61.5
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 1.4e-144 516.9 384 61.7
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 1.0e-142 510.8 411 58.4
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 5.6e-141 505.0 371 63.6
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 2.2e-137 493.0 313 69.6
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.2e-135 487.3 312 69.6
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 3.4e-130 469.2 380 59.5
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 2.0e-122 443.4 423 53.4
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.2e-95 354.4 346 46.5
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 1.5e-88 330.9 214 70.6
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 5.2e-86 322.4 372 41.7
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 1.5e-85 320.9 209 67.0
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 1.7e-84 317.4 364 42.3
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 1.4e-83 314.3 201 68.2
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 1.1e-75 288.1 354 38.4
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 7.5e-61 238.8 280 40.7
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 3.4e-45 186.8 106 73.6
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 9.0e-38 162.2 103 70.9
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 7.6e-37 159.1 118 65.3
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 7.6e-37 159.1 118 65.3
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 6.4e-36 156.0 103 69.9
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 7.8e-34 149.1 85 78.8
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 2.9e-28 130.6 139 48.9
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 7.1e-11 72.8 49 67.3
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.7e-10 70.9 50 66.0
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 4.6e-10 70.1 49 65.3
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.6e-07 61.6 47 61.7
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.7e-07 60.5 48 58.3
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 4.8e-07 60.1 45 60.0


User provided reference genes

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