Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0997 Ceratophyllum demersum HOM05D006675 ORTHO05D008302 5.8e-141 504.2 254 100.0
COL.COLO4_16920 Corchorus olitorius HOM05D006675 ORTHO05D008302 6.5e-76 288.1 180 77.2
Thecc.03G311400 Theobroma cacao HOM05D006675 ORTHO05D008302 1.5e-75 287.0 180 77.2
Aqoxy5G00552 Aquilegia oxysepala HOM05D006675 ORTHO05D008302 1.9e-75 286.6 180 78.9
Duzib205G0370 Durio zibethinus HOM05D006675 ORTHO05D008302 1.9e-75 286.6 180 76.7
HPP92_023365 Vanilla planifolia HOM05D006675 ORTHO05D008302 4.2e-75 285.4 180 76.1
RcHm_v2.0_Chr7g0212211 Rosa chinensis HOM05D006675 ORTHO05D008302 7.2e-75 284.6 178 76.4
PGR042G1238 Punica granatum HOM05D006675 ORTHO05D008302 9.4e-75 284.3 178 75.3
FvH4_5g23270 Fragaria vesca HOM05D006675 ORTHO05D008302 3.6e-74 282.3 178 75.8
FAN18G2874 Fragaria x ananassa HOM05D006675 ORTHO05D008302 3.6e-74 282.3 178 75.8
Gohir.D03G176700 Gossypium hirsutum HOM05D006675 ORTHO05D008302 4.7e-74 282.0 180 75.6
QL12p001835 Quercus lobata HOM05D006675 ORTHO05D008302 4.7e-74 282.0 178 75.8
GSVIVG01013027001 Vitis vinifera HOM05D006675 ORTHO05D008302 4.7e-74 282.0 178 76.4
CiPaw.12G069400 Carya illinoinensis HOM05D006675 ORTHO05D008302 8.0e-74 281.2 178 74.2
CsaV3_3G001280 Cucumis sativus L. HOM05D006675 ORTHO05D008302 8.0e-74 281.2 180 75.0
MELO3C013816.2 Cucumis melo HOM05D006675 ORTHO05D008302 1.0e-73 280.8 180 75.0
FAN18G0120 Fragaria x ananassa HOM05D006675 ORTHO05D008302 1.0e-73 280.8 178 75.3
Manes.01G194600 Manihot esculenta HOM05D006675 ORTHO05D008302 1.4e-73 280.4 180 75.6
Ciclev10002637m.g Citrus clementina HOM05D006675 ORTHO05D008302 1.8e-73 280.0 181 75.1
Sed0011153 Sechium edule HOM05D006675 ORTHO05D008302 1.8e-73 280.0 180 75.6
CSS0012354 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 3.0e-73 279.3 180 76.1
CSS0042811 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 3.0e-73 279.3 180 76.1
Gohir.A03G000027 Gossypium hirsutum HOM05D006675 ORTHO05D008302 3.0e-73 279.3 180 74.4
Potri.001G135700 Populus trichocarpa HOM05D006675 ORTHO05D008302 4.0e-73 278.9 180 74.4
Solyc08g076130.3 Solanum lycopersicum HOM05D006675 ORTHO05D008302 4.0e-73 278.9 180 75.0
Sopen08g024770 Solanum pennellii HOM05D006675 ORTHO05D008302 4.0e-73 278.9 180 75.0
Atru.chr3.2397 Acer truncatum HOM05D006675 ORTHO05D008302 5.2e-73 278.5 178 75.8
VMungo1215G1847 Vigna mungo HOM05D006675 ORTHO05D008302 6.8e-73 278.1 178 75.3
BcaC09g51446 Brassica carinata HOM05D000169 ORTHO05D008302 8.8e-73 277.7 250 57.6
BolC1t01279H Brassica oleracea HOM05D000169 ORTHO05D000542 8.8e-73 277.7 250 57.6
Prupe.4G182100 Prunus persica HOM05D006675 ORTHO05D008302 8.8e-73 277.7 181 74.6
Duzib068G1343 Durio zibethinus HOM05D006675 ORTHO05D008302 1.5e-72 276.9 180 74.4
PGSC0003DMG400003501 Solanum tuberosum HOM05D006675 ORTHO05D008302 1.5e-72 276.9 178 74.2
C01p13040 Brassica napus HOM05D000169 ORTHO05D000542 2.0e-72 276.6 254 57.1
PGSC0003DMG400009297 Solanum tuberosum HOM05D006675 ORTHO05D008302 2.0e-72 276.6 178 74.7
MD11G1243800 Malus domestica HOM05D006675 ORTHO05D008302 2.6e-72 276.2 179 73.7
CAN.G773.29 Capsicum annuum HOM05D006675 ORTHO05D008302 4.4e-72 275.4 178 73.6
Lj2g0021996 Lotus japonicus HOM05D006675 ORTHO05D008302 4.4e-72 275.4 180 72.8
Migut.E01322 Erythranthe guttata HOM05D006675 ORTHO05D008302 5.7e-72 275.0 178 72.5
BcaNung04023 Brassica carinata HOM05D006675 ORTHO05D008302 7.5e-72 274.6 180 72.2
CANSAT21G2314 Cannabis sativa HOM05D006675 ORTHO05D008302 7.5e-72 274.6 178 74.2
Lalb_Chr16g0380971 Lupinus albus HOM05D006675 ORTHO05D008302 7.5e-72 274.6 178 73.6
PSO170G4469 Papaver somniferum HOM05D006675 ORTHO05D008302 7.5e-72 274.6 180 73.9
THA.LOC104806177 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 7.5e-72 274.6 180 70.0
ATR0796G253 Amborella trichopoda HOM05D006675 ORTHO05D008302 9.8e-72 274.2 180 73.3
MSTRG.1795 Avicennia marina HOM05D006675 ORTHO05D008302 9.8e-72 274.2 178 73.0
Cfa009033 Carpinus fangiana HOM05D006675 ORTHO05D008302 9.8e-72 274.2 178 73.6
THA.LOC104798450 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 9.8e-72 274.2 180 73.3
Zm00001eb157890 Zea mays HOM05D006675 ORTHO05D008302 9.8e-72 274.2 180 76.1
BraA01t01049Z Brassica rapa HOM05D006675 ORTHO05D008302 1.3e-71 273.9 180 71.7
Carub.0007s2216 Capsella rubella HOM05D006675 ORTHO05D008302 1.3e-71 273.9 180 71.7
Haze_12062 Corylus avellana HOM05D006675 ORTHO05D008302 1.3e-71 273.9 178 73.6
Phvul.002G134300 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 1.3e-71 273.9 180 73.3
Sc10g0009260 Simmondsia chinensis HOM05D006675 ORTHO05D008302 1.3e-71 273.9 180 72.8
AT4G19003 Arabidopsis thaliana HOM05D006675 ORTHO05D008302 1.7e-71 273.5 180 71.7
TWI60G1033 Tripterygium wilfordii HOM05D006675 ORTHO05D008302 1.7e-71 273.5 178 71.9
Lj8A133G65 Lonicera japonica HOM05D006675 ORTHO05D008302 3.7e-71 272.3 199 66.8
Sp7g17730 Schrenkiella parvula HOM05D006675 ORTHO05D008302 3.7e-71 272.3 180 71.1
Glyma.09G209600 Glycine max HOM05D006675 ORTHO05D008302 4.8e-71 271.9 178 73.0
Medtr5g028000 Medicago truncatula HOM05D006675 ORTHO05D008302 4.8e-71 271.9 180 72.8
AL7G35150 Arabidopsis lyrata HOM05D006675 ORTHO05D008302 6.3e-71 271.6 180 71.7
Thhalv10026368m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 6.3e-71 271.6 180 70.6
DCAR_024956 Daucus carota HOM05D006675 ORTHO05D008302 1.1e-70 270.8 179 72.1
Nn1g09734 Nelumbo nucifera HOM05D006675 ORTHO05D008302 1.4e-70 270.4 178 73.6
Cc08_g03740 Coffea canephora HOM05D006675 ORTHO05D008302 1.8e-70 270.0 178 71.3
CARHR225840 Cardamine hirsuta HOM05D006675 ORTHO05D008302 5.4e-70 268.5 180 70.0
SalBow8G0964 Salvia bowleyana HOM05D006675 ORTHO05D008302 1.2e-69 267.3 178 70.8
Aa31LG6G1700 Aethionema arabicum HOM05D006675 ORTHO05D008302 1.6e-69 266.9 179 70.4
Glyma.01G011400 Glycine max HOM05D006675 ORTHO05D008302 1.6e-69 266.9 178 70.2
PSO017G0801 Papaver somniferum HOM05D006675 ORTHO05D008302 3.5e-69 265.8 180 72.8
Actinidia01330 Actinidia chinensis HOM05D006675 ORTHO05D008302 5.9e-69 265.0 166 76.5
ECA233G1922 Erigeron canadensis HOM05D006675 ORTHO05D008302 5.0e-68 261.9 180 68.3
HanXRQChr12g0362191 Helianthus annuus HOM05D006675 ORTHO05D008302 1.9e-67 260.0 180 68.9
Mapoly0004s0185 Marchantia polymorpha HOM05D006675 ORTHO05D008302 4.7e-66 255.4 177 68.4
Rhsim06G0208000 Rhododendron simsii HOM05D006675 ORTHO05D008302 1.0e-65 254.2 204 64.7
SEGI_13659 Sequoiadendron giganteum HOM05D006675 ORTHO05D008302 1.4e-65 253.8 175 68.0
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 7.5e-64 248.1 203 59.6
HanXRQChr14g0430781 Helianthus annuus HOM05D006675 ORTHO05D008302 7.5e-64 248.1 187 65.2
Oeu017091.1 Olea europaea HOM05D006675 ORTHO05D008302 3.7e-63 245.7 164 73.8
Dinv06918 Davidia involucrata HOM05D006675 ORTHO05D008302 1.1e-62 244.2 159 76.1
Peaxi162Scf00052g00336 Petunia axillaris HOM05D006675 ORTHO05D008302 1.4e-62 243.8 157 73.9
Eucgr.E01319 Eucalyptus grandis HOM05D006675 ORTHO05D008302 2.4e-62 243.0 176 65.9
AUR62007364 Chenopodium quinoa HOM05D006675 ORTHO05D008302 4.1e-62 242.3 160 74.4
Eucgr.E01313 Eucalyptus grandis HOM05D006675 ORTHO05D008302 1.2e-61 240.7 177 65.0
SGA_v2.0_scaffold8G04421 Striga asiatica HOM05D006675 ORTHO05D008302 2.0e-61 240.0 159 71.7
Pp3c15_1420 Physcomitrium patens HOM05D006675 ORTHO05D008302 3.8e-60 235.7 175 62.9
Ca_25161_v3 Cicer arietinum L. HOM05D006675 ORTHO05D000003 5.0e-60 235.3 160 71.2
unitig_61.g26418 Utricularia gibba HOM05D006675 ORTHO05D008302 5.0e-60 235.3 160 70.6
SMO364G0912 Selaginella moellendorffii HOM05D006675 ORTHO05D008302 2.5e-59 233.0 176 61.9
Lsat_1_v5_gn_9_15400 Lactuca sativa HOM05D006675 ORTHO05D008302 4.3e-59 232.3 181 63.5
Nitab4.5_0002897g0050 Nicotiana tabacum HOM05D006675 ORTHO05D008302 7.3e-59 231.5 178 65.2
Thhalv10015765m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 9.5e-59 231.1 167 67.1
Dinv29017 Davidia involucrata HOM05D006675 ORTHO05D008302 1.2e-58 230.7 153 69.9
ClCG06G010630 Citrullus lanatus HOM05D006675 ORTHO05D008302 1.4e-57 227.3 172 67.4
EL10Ac5g11997 Beta vulgaris HOM05D006675 ORTHO05D008302 1.8e-57 226.9 157 70.7
Gorai.003G186000 Gossypium raimondii HOM05D006675 ORTHO05D008302 1.8e-57 226.9 139 74.8
CBR_g10842 Chara braunii HOM05D006675 ORTHO05D008302 6.4e-55 218.4 171 59.1
TPR.G19460 Trifolium pratense HOM05D006675 ORTHO05D008302 3.2e-54 216.1 139 71.9
Sabra01G0105000 Salix brachista HOM05D006675 ORTHO05D008302 5.9e-53 211.8 218 54.1
Nitab4.5_0002188g0010 Nicotiana tabacum HOM05D006675 ORTHO05D008302 7.5e-48 194.9 179 59.2
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 1.7e-47 193.7 116 75.0
SGA_v2.0_scaffold8G04249 Striga asiatica HOM05D006675 ORTHO05D008302 1.1e-43 181.0 121 69.4
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis HOM05D006675 ORTHO05D008302 5.6e-43 178.7 146 58.9
Cre02.g076400 Chlamydomonas reinhardtii HOM05D006675 ORTHO05D008302 1.6e-42 177.2 174 44.8
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea HOM05D006675 ORTHO05D008302 9.8e-40 167.9 117 61.5
Os01g0658500 Oryza sativa ssp. japonica HOM05D006675 ORTHO05D008302 7.8e-37 158.3 94 74.5
arahy.Tifrunner.gnm1.ann1.1JB7Z5 Arachis hypogaea HOM05D000001 ORTHO05D000003 7.3e-35 151.8 183 45.9
arahy.Tifrunner.gnm1.ann1.K4EES2 Arachis hypogaea HOM05D000001 ORTHO05D000003 7.3e-35 151.8 183 45.9
vmacro00263 Vaccinium macrocarpon HOM05D006675 ORTHO05D008302 1.2e-32 144.4 96 74.0
PRCOL_00001914 Prasinoderma coloniale HOM05D006675 ORTHO05D008302 5.8e-32 142.1 174 42.0
MCO12G007 Micromonas commoda HOM05D006675 ORTHO05D008302 2.2e-31 140.2 174 37.4
Ah.12g055570 Amaranthus hybridus HOM05D000160 ORTHO05D008302 7.1e-30 135.2 126 62.7
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea HOM05D006675 ORTHO05D008302 1.9e-27 127.1 111 54.1
Psat2g139880 Pisum sativum HOM05D006675 ORTHO05D008302 5.6e-27 125.6 91 67.0
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla HOM05D006675 ORTHO05D008302 1.5e-24 117.5 172 40.1
GSVIVG01009131001 Vitis vinifera HOM05D006675 ORTHO05D008302 2.2e-23 113.6 82 67.1
BcaB07g30589 Brassica carinata HOM05D006675 ORTHO05D008302 2.3e-20 103.6 127 44.9
CARHR288450 Cardamine hirsuta HOM05D006675 ORTHO05D008302 5.1e-20 102.4 71 60.6
Actinidia29284 Actinidia chinensis HOM05D006675 ORTHO05D008302 3.1e-17 93.2 65 72.3
BcaB06g29627 Brassica carinata HOM05D006675 ORTHO05D008302 1.2e-16 91.3 101 53.5
A01p11020 Brassica napus HOM05D006675 ORTHO05D008302 3.5e-13 79.7 56 73.2
Haze_08131 Corylus avellana HOM05D006675 ORTHO05D008302 6.0e-13 79.0 50 70.0
FAN13G1728 Fragaria x ananassa HOM05D006675 ORTHO05D008302 7.9e-13 78.6 46 73.9
Hund14383 Selenicereus undatus HOM05D006675 ORTHO05D008302 1.6e-10 70.9 56 62.5


User provided reference genes

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