Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 3.6e-70 268.1 129 100.0
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 5.9e-25 117.9 99 58.6
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 1.7e-24 116.3 96 59.4
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 5.0e-24 114.8 99 56.6
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 2.5e-23 112.5 91 58.2
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 3.3e-23 112.1 94 56.4
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 3.3e-23 112.1 95 57.9
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 5.6e-23 111.3 95 58.9
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 5.6e-23 111.3 95 58.9
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 5.6e-23 111.3 95 58.9
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 7.3e-23 110.9 91 59.3
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 9.5e-23 110.5 94 57.4
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 1.2e-22 110.2 98 55.1
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 1.2e-22 110.2 94 56.4
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 1.2e-22 110.2 90 62.2
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 1.2e-22 110.2 97 56.7
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 1.6e-22 109.8 87 59.8
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 2.1e-22 109.4 92 57.6
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 2.1e-22 109.4 97 55.7
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 2.8e-22 109.0 102 55.9
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 2.8e-22 109.0 93 55.9
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 2.8e-22 109.0 92 57.6
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 2.8e-22 109.0 90 58.9
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 3.6e-22 108.6 95 57.9
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 4.7e-22 108.2 103 53.4
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 4.7e-22 108.2 93 59.1
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 6.1e-22 107.8 91 59.3
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 6.1e-22 107.8 103 53.4
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 6.1e-22 107.8 93 59.1
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 1.0e-21 107.1 94 58.5
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 1.0e-21 107.1 95 54.7
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 1.4e-21 106.7 94 58.5
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 1.4e-21 106.7 94 56.4
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 1.8e-21 106.3 90 56.7
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 2.3e-21 105.9 90 61.1
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 2.3e-21 105.9 90 57.8
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 3.0e-21 105.5 88 58.0
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 4.0e-21 105.1 106 50.0
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 4.0e-21 105.1 94 56.4
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 4.0e-21 105.1 104 51.0
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 4.0e-21 105.1 94 56.4
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 4.0e-21 105.1 92 57.6
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 5.2e-21 104.8 94 53.2
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 6.8e-21 104.4 91 59.3
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 6.8e-21 104.4 96 53.1
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 6.8e-21 104.4 99 55.6
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 1.2e-20 103.6 98 54.1
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 1.2e-20 103.6 91 59.3
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 2.0e-20 102.8 104 50.0
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 2.0e-20 102.8 91 57.1
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 2.0e-20 102.8 91 57.1
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 2.6e-20 102.4 95 57.9
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 2.6e-20 102.4 94 57.4
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 3.4e-20 102.1 91 56.0
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 3.4e-20 102.1 94 51.1
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 3.4e-20 102.1 92 57.6
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 4.4e-20 101.7 92 53.3
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 5.7e-20 101.3 107 48.6
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 5.7e-20 101.3 91 58.2
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 7.5e-20 100.9 93 57.0
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 9.8e-20 100.5 91 58.2
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 9.8e-20 100.5 83 59.0
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 1.3e-19 100.1 92 55.4
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.3e-19 100.1 83 59.0
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 1.7e-19 99.8 92 52.2
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 2.9e-19 99.0 90 55.6
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 2.9e-19 99.0 95 52.6
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 3.7e-19 98.6 91 54.9
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 3.7e-19 98.6 95 52.6
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 3.7e-19 98.6 98 50.0
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 3.7e-19 98.6 96 54.2
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 4.9e-19 98.2 96 47.9
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 6.4e-19 97.8 92 53.3
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 6.4e-19 97.8 100 51.0
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 6.4e-19 97.8 100 51.0
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 6.4e-19 97.8 100 51.0
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 8.3e-19 97.4 91 52.7
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 8.3e-19 97.4 100 50.0
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 1.1e-18 97.1 103 47.6
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 1.1e-18 97.1 95 51.6
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 1.4e-18 96.7 95 52.6
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 1.8e-18 96.3 94 54.3
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 5.4e-18 94.7 91 53.8
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 5.4e-18 94.7 94 52.1
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 7.0e-18 94.4 95 47.4
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 7.0e-18 94.4 105 43.8
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 9.2e-18 94.0 94 53.2
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 9.2e-18 94.0 81 54.3
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 1.2e-17 93.6 98 49.0
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 1.6e-17 93.2 95 51.6
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 2.7e-17 92.4 92 52.2
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 3.5e-17 92.0 98 46.9
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 3.5e-17 92.0 100 48.0
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 4.6e-17 91.7 94 51.1
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 4.6e-17 91.7 89 56.2
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 5.0e-16 88.2 94 48.9
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 6.6e-16 87.8 83 48.2
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 2.5e-15 85.9 91 52.7
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 4.3e-15 85.1 78 51.3
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 3.6e-14 82.0 70 54.3
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 4.7e-14 81.6 78 56.4
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 6.2e-14 81.3 130 37.7
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 6.2e-14 81.3 94 47.9
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 2.3e-13 79.3 71 54.9
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 5.2e-13 78.2 127 39.4
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 2.0e-12 76.3 75 49.3
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 2.9e-11 72.4 101 36.6
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 1.1e-10 70.5 90 45.6
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 2.0e-09 66.2 174 30.5
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 6.6e-08 61.2 98 41.8
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 1.1e-07 60.5 94 38.3
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 3.3e-07 58.9 52 59.6
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 4.3e-07 58.5 91 41.8
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 4.3e-07 58.5 49 63.3
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 4.3e-07 58.5 91 41.8
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 4.3e-07 58.5 49 63.3
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 9.5e-07 57.4 54 53.7
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 3.6e-06 55.5 48 56.2


User provided reference genes

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