Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0911 Ceratophyllum demersum HOM05D001111 ORTHO05D043855 7.0e-122 440.7 225 100.0
CDE06G0711 Ceratophyllum demersum HOM05D001111 ORTHO05D043855 2.6e-84 315.8 249 72.7
Manes.14G065800 Manihot esculenta HOM05D001111 ORTHO05D000939 2.0e-12 77.0 144 40.3
Nitab4.5_0007208g0010 Nicotiana tabacum HOM05D001111 ORTHO05D000939 7.7e-12 75.1 251 29.9
Manes.06G104800 Manihot esculenta HOM05D001111 ORTHO05D000939 1.0e-11 74.7 139 41.0
Hma1.2p1_0176F.1_g077400 Hydrangea macrophylla HOM05D001111 ORTHO05D000939 1.1e-10 71.2 161 34.8
DCAR_021689 Daucus carota HOM05D001111 ORTHO05D000939 1.9e-10 70.5 229 33.6
Oeu043052.2 Olea europaea HOM05D001111 ORTHO05D000939 1.9e-10 70.5 230 32.6
Peaxi162Scf00700g00061 Petunia axillaris HOM05D001111 ORTHO05D000939 1.9e-10 70.5 251 31.9
Atru.chr9.2477 Acer truncatum HOM05D001111 ORTHO05D000939 4.2e-10 69.3 147 38.8
Nitab4.5_0004348g0010 Nicotiana tabacum HOM05D001111 ORTHO05D000939 4.2e-10 69.3 254 28.3
Peaxi162Scf00700g00062 Petunia axillaris HOM05D001111 ORTHO05D000939 7.2e-10 68.6 232 31.0
Peaxi162Scf00700g00066 Petunia axillaris HOM05D001111 ORTHO05D000939 1.2e-09 67.8 241 31.1
Cpa.g.sc76.61 Carica papaya HOM05D001111 ORTHO05D000939 3.6e-09 66.2 129 39.5
HanXRQChr09g0272191 Helianthus annuus HOM05D001111 ORTHO05D000939 3.6e-09 66.2 145 33.8
Lj7P592T34 Lonicera japonica HOM05D001111 ORTHO05D000939 3.6e-09 66.2 156 34.0
Nitab4.5_0009783g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 3.6e-09 66.2 148 33.8
Thecc.03G012600 Theobroma cacao HOM05D001111 ORTHO05D000939 3.6e-09 66.2 135 40.7
CSS0041124 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 6.1e-09 65.5 131 38.9
Gohir.A10G103400 Gossypium hirsutum HOM05D001111 ORTHO05D000939 6.1e-09 65.5 240 30.8
TAR622G0132 Trochodendron aralioides HOM05D001111 ORTHO05D000939 6.1e-09 65.5 145 38.6
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 8.0e-09 65.1 145 39.3
Lju41C35T12 Lonicera japonica HOM05D001111 ORTHO05D000939 1.0e-08 64.7 256 30.1
Thecc.04G010500 Theobroma cacao HOM05D001111 ORTHO05D000939 1.0e-08 64.7 245 33.1
Gohir.D10G087500 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.4e-08 64.3 243 30.9
Gorai.011G095800 Gossypium raimondii HOM05D001111 ORTHO05D000939 1.4e-08 64.3 243 30.9
SalBow1G0495 Salvia bowleyana HOM05D001111 ORTHO05D000939 1.4e-08 64.3 233 29.6
TAR371G1086 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.4e-08 64.3 144 37.5
CANSAT64G1643 Cannabis sativa HOM05D001111 ORTHO05D000939 1.8e-08 63.9 288 26.7
COL.COLO4_30037 Corchorus olitorius HOM05D001111 ORTHO05D000939 1.8e-08 63.9 128 39.8
Nitab4.5_0007719g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.3e-08 63.5 175 30.9
Actinidia33068 Actinidia chinensis HOM05D001111 ORTHO05D000939 3.0e-08 63.2 141 37.6
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 3.0e-08 63.2 263 27.8
Duzib147G1636 Durio zibethinus HOM05D001111 ORTHO05D000939 3.0e-08 63.2 243 32.9
Duzib068G0287 Durio zibethinus HOM05D001111 ORTHO05D000939 5.2e-08 62.4 138 38.4
Oeu060136.1 Olea europaea HOM05D001111 ORTHO05D000939 5.2e-08 62.4 130 35.4
Solyc02g086810.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 5.2e-08 62.4 258 28.3
Oeu048646.1 Olea europaea HOM05D001111 ORTHO05D000939 6.7e-08 62.0 237 28.7
Peaxi162Scf00700g00055 Petunia axillaris HOM05D001111 ORTHO05D000939 6.7e-08 62.0 198 33.3
PGSC0003DMG400045223 Solanum tuberosum HOM05D001111 ORTHO05D000939 8.8e-08 61.6 145 36.6
Lsat_1_v5_gn_0_15161 Lactuca sativa HOM05D001111 ORTHO05D000939 1.1e-07 61.2 255 29.0
Oeu062983.1 Olea europaea HOM05D001111 ORTHO05D000939 1.1e-07 61.2 131 37.4
Sopen02g031580 Solanum pennellii HOM05D001111 ORTHO05D000939 1.1e-07 61.2 255 27.5
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.1e-07 61.2 145 38.6
Aqoxy3G02945 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 1.5e-07 60.8 146 38.4
Migut.H00111 Erythranthe guttata HOM05D001111 ORTHO05D000939 1.5e-07 60.8 249 29.3
Oeu037699.1 Olea europaea HOM05D001111 ORTHO05D000939 1.5e-07 60.8 240 29.2
TWI31G0459 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 1.5e-07 60.8 157 33.8
CsaV3_5G027360 Cucumis sativus L. HOM05D001111 ORTHO05D000939 2.0e-07 60.5 157 35.0
Prupe.1G253100 Prunus persica HOM05D001111 ORTHO05D000939 2.0e-07 60.5 141 38.3
Duzib264G1045 Durio zibethinus HOM05D001111 ORTHO05D000939 2.6e-07 60.1 243 34.2
Medtr5g034230 Medicago truncatula HOM05D001111 ORTHO05D000939 2.6e-07 60.1 136 33.8
Oeu016383.1 Olea europaea HOM05D001111 ORTHO05D000939 2.6e-07 60.1 132 36.4
Dinv00507 Davidia involucrata HOM05D001111 ORTHO05D000939 3.3e-07 59.7 264 29.9
TWI39G0739 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 3.3e-07 59.7 157 33.8
Solyc03g114350.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 5.7e-07 58.9 199 31.2
Actinidia19320 Actinidia chinensis HOM05D001111 ORTHO05D000939 7.5e-07 58.5 139 36.0
CDE06G1645 Ceratophyllum demersum HOM05D000875 ORTHO05D000939 7.5e-07 58.5 138 35.5
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 7.5e-07 58.5 231 30.7
PGSC0003DMG400024504 Solanum tuberosum HOM05D001111 ORTHO05D000939 7.5e-07 58.5 186 32.8
FvH4_5g05310 Fragaria vesca HOM05D001111 ORTHO05D000939 9.7e-07 58.2 132 33.3
FAN14G5221 Fragaria x ananassa HOM05D001111 ORTHO05D000939 9.7e-07 58.2 169 34.3
FAN17G1475 Fragaria x ananassa HOM05D001111 ORTHO05D000939 9.7e-07 58.2 165 30.3
FAN18G1119 Fragaria x ananassa HOM05D001111 ORTHO05D000939 9.7e-07 58.2 132 33.3
Sopen06g027760 Solanum pennellii HOM05D001111 ORTHO05D000939 9.7e-07 58.2 177 33.3
PGSC0003DMG400000492 Solanum tuberosum HOM05D001111 ORTHO05D000939 9.7e-07 58.2 261 28.4
CSS0035264 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 1.3e-06 57.8 254 29.1
CSS0041696 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 1.3e-06 57.8 254 29.1
Cfa019132 Carpinus fangiana HOM05D001111 ORTHO05D000939 1.3e-06 57.8 138 33.3
FvH4_6g50800 Fragaria vesca HOM05D001111 ORTHO05D000939 1.3e-06 57.8 170 34.1
Sopen03g033450 Solanum pennellii HOM05D001111 ORTHO05D000939 1.3e-06 57.8 199 31.2
TPR.G21083 Trifolium pratense HOM05D001111 ORTHO05D000939 1.3e-06 57.8 157 34.4
VMungo1383G2935 Vigna mungo HOM05D001111 ORTHO05D000939 1.3e-06 57.8 161 34.8
Duzib187G0831 Durio zibethinus HOM05D001111 ORTHO05D000939 1.7e-06 57.4 238 31.1
FAN04G3199 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.7e-06 57.4 132 33.3
Nitab4.5_0006281g0050 Nicotiana tabacum HOM05D001111 ORTHO05D000939 1.7e-06 57.4 263 28.1
RcHm_v2.0_Chr2g0172191 Rosa chinensis HOM05D001111 ORTHO05D000939 1.7e-06 57.4 157 35.0
FvH4_4g34370 Fragaria vesca HOM05D001111 ORTHO05D000939 2.2e-06 57.0 167 29.9
FAN07G0616 Fragaria x ananassa HOM05D001111 ORTHO05D000939 2.2e-06 57.0 145 33.1
FAN12G3240 Fragaria x ananassa HOM05D001111 ORTHO05D000939 2.2e-06 57.0 167 29.9
Lsat_1_v5_gn_0_14901 Lactuca sativa HOM05D001111 ORTHO05D000939 2.2e-06 57.0 258 27.9
Lsat_1_v5_gn_5_14521 Lactuca sativa HOM05D001111 ORTHO05D000939 2.2e-06 57.0 135 34.8
Oeu040830.1 Olea europaea HOM05D001111 ORTHO05D000939 2.2e-06 57.0 170 32.4
Oeu040831.1 Olea europaea HOM05D001111 ORTHO05D000939 2.2e-06 57.0 170 32.4
Prupe.3G285800 Prunus persica HOM05D001111 ORTHO05D000939 2.2e-06 57.0 75 52.0
Sabra12G0057900 Salix brachista HOM05D001111 ORTHO05D000939 2.2e-06 57.0 147 35.4
SGA_v2.0_scaffold224G42977 Striga asiatica HOM05D001111 ORTHO05D000939 2.2e-06 57.0 219 29.2
MSTRG.24021 Avicennia marina HOM05D001111 ORTHO05D000939 2.8e-06 56.6 235 27.7
Glyma.19G065000 Glycine max HOM05D001111 ORTHO05D000939 2.8e-06 56.6 238 31.1
VMungo1215G0354 Vigna mungo HOM05D001111 ORTHO05D000939 2.8e-06 56.6 128 36.7
FAN22G0614 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.7e-06 56.2 167 30.5
QL10p011670 Quercus lobata HOM05D001111 ORTHO05D000939 3.7e-06 56.2 130 40.8
FAN09G0168 Fragaria x ananassa HOM05D001111 ORTHO05D000939 4.8e-06 55.8 188 33.5
FAN18G2882 Fragaria x ananassa HOM05D001111 ORTHO05D000939 4.8e-06 55.8 132 32.6
Glyma.16G073400 Glycine max HOM05D001111 ORTHO05D000939 4.8e-06 55.8 246 30.5
Ah.11g051620 Amaranthus hybridus HOM05D001111 ORTHO05D000939 6.3e-06 55.5 126 35.7
CAN.G781.10 Capsicum annuum HOM05D001111 ORTHO05D000939 6.3e-06 55.5 61 52.5
Duzib205G1255 Durio zibethinus HOM05D001111 ORTHO05D000939 8.2e-06 55.1 213 30.5
MD13G1092700 Malus domestica HOM05D001111 ORTHO05D000939 8.2e-06 55.1 138 37.7
MD16G1093500 Malus domestica HOM05D001111 ORTHO05D000939 8.2e-06 55.1 135 34.8
Sc04g0001810 Simmondsia chinensis HOM05D001111 ORTHO05D000939 8.2e-06 55.1 122 38.5


User provided reference genes

Program Settings