Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 3.8e-100 368.2 193 100.0
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 2.5e-96 355.5 193 96.4
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 1.9e-75 286.2 192 78.6
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 7.2e-75 284.3 191 77.5
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 7.2e-75 284.3 191 75.9
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 3.6e-74 282.0 192 76.6
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 4.6e-74 281.6 192 78.1
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 7.9e-74 280.8 194 76.3
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 7.9e-74 280.8 194 76.3
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 1.8e-73 279.6 195 76.4
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 3.0e-73 278.9 195 76.4
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 8.8e-73 277.3 192 75.0
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 1.5e-72 276.6 192 75.5
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 4.3e-72 275.0 191 77.0
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 7.4e-72 274.2 192 74.5
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 1.7e-71 273.1 197 73.1
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 1.7e-71 273.1 193 74.1
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 2.2e-71 272.7 193 74.6
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 2.2e-71 272.7 195 73.3
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 2.2e-71 272.7 193 75.1
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 2.2e-71 272.7 193 74.6
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 4.8e-71 271.6 163 85.9
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 6.3e-71 271.2 200 72.5
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 1.1e-70 270.4 193 74.1
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 2.4e-70 269.2 196 73.0
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 2.4e-70 269.2 192 74.5
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 3.1e-70 268.9 159 86.8
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 3.1e-70 268.9 159 86.8
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 4.1e-70 268.5 196 74.0
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 4.1e-70 268.5 196 73.5
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 6.9e-70 267.7 192 73.4
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 6.9e-70 267.7 193 71.0
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 6.9e-70 267.7 192 73.4
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 6.9e-70 267.7 192 73.4
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 6.9e-70 267.7 192 74.0
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 6.9e-70 267.7 196 73.0
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 1.2e-69 266.9 191 73.8
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.5e-69 266.5 192 73.4
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.5e-69 266.5 192 73.4
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 2.0e-69 266.2 193 72.0
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.6e-69 265.8 192 72.9
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 2.6e-69 265.8 192 72.9
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 4.5e-69 265.0 164 84.1
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 7.7e-69 264.2 192 72.4
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 7.7e-69 264.2 192 72.4
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 7.7e-69 264.2 192 72.4
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 7.7e-69 264.2 192 72.4
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 7.7e-69 264.2 199 71.4
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 7.7e-69 264.2 165 82.4
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 7.7e-69 264.2 169 79.3
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 1.0e-68 263.8 196 70.4
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 1.0e-68 263.8 192 72.9
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 1.0e-68 263.8 191 72.8
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 1.3e-68 263.5 192 72.9
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 1.3e-68 263.5 169 76.9
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 1.3e-68 263.5 192 72.4
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 1.7e-68 263.1 169 77.5
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 1.7e-68 263.1 191 73.3
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 1.7e-68 263.1 159 84.9
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 2.2e-68 262.7 192 71.9
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 2.2e-68 262.7 169 78.1
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 2.2e-68 262.7 211 67.3
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 3.8e-68 261.9 159 84.9
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 3.8e-68 261.9 192 71.9
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 3.8e-68 261.9 192 71.9
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 3.8e-68 261.9 189 71.4
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 3.8e-68 261.9 150 89.3
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 5.0e-68 261.5 164 79.9
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 5.0e-68 261.5 159 83.6
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 6.5e-68 261.2 169 78.1
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 8.5e-68 260.8 167 79.6
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 1.1e-67 260.4 196 70.4
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 1.9e-67 259.6 192 72.4
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 1.9e-67 259.6 192 70.3
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 2.5e-67 259.2 169 75.7
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 2.5e-67 259.2 164 79.3
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 2.5e-67 259.2 169 79.3
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 5.5e-67 258.1 169 75.1
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 7.2e-67 257.7 191 71.2
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 1.6e-66 256.5 193 67.4
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 1.6e-66 256.5 162 82.1
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 2.1e-66 256.1 191 68.6
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 2.1e-66 256.1 164 78.7
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 2.1e-66 256.1 159 81.8
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 1.0e-65 253.8 159 81.8
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.4e-65 253.4 169 77.5
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 3.0e-65 252.3 192 69.8
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 3.9e-65 251.9 169 78.7
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.5e-64 250.0 161 78.3
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 2.0e-64 249.6 161 78.3
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 4.4e-64 248.4 167 74.3
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 4.4e-64 248.4 192 68.2
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 1.7e-63 246.5 159 79.2
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.8e-62 243.0 159 79.2
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 5.3e-62 241.5 159 77.4
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 7.7e-61 237.7 158 76.6
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 1.0e-57 227.3 159 68.6
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 8.8e-57 224.2 144 82.6
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 6.3e-47 191.4 166 57.2
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 5.9e-45 184.9 155 54.8
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 1.2e-42 177.2 105 86.7
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 3.0e-41 172.6 156 53.8
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 4.4e-40 168.7 158 52.5
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 4.4e-40 168.7 158 52.5
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 4.4e-40 168.7 137 67.2
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 5.7e-40 168.3 158 52.5
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 5.7e-40 168.3 158 52.5
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 5.4e-38 161.8 103 80.6
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.6e-37 160.2 94 86.2
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 3.5e-37 159.1 102 80.4
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 5.9e-37 158.3 159 49.7
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 2.1e-34 149.8 103 75.7
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 4.9e-31 138.7 114 66.7
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.3e-28 130.6 90 75.6
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.1e-27 127.5 86 73.3
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 4.4e-24 115.5 71 83.1
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 1.1e-19 100.9 155 34.8
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.5e-19 100.5 155 36.1
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 5.6e-19 98.6 91 58.2
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 1.1e-17 94.4 88 56.8
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 6.8e-17 91.7 88 56.8
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 3.4e-16 89.4 175 30.9
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.7e-15 87.0 71 59.2
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 5.1e-12 75.5 176 31.2
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.2e-10 70.9 59 62.7
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.4e-09 67.4 44 68.2
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 5.8e-08 62.0 59 50.8
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.1e-06 57.8 48 62.5
SMO334G0054 Selaginella moellendorffii HOM05D005275 ORTHO05D006435 9.2e-06 54.7 161 31.1


User provided reference genes

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