Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0752 Ceratophyllum demersum HOM05D000099 ORTHO05D016138 4.7e-61 237.7 117 100.0
Medtr0052s0100 Medicago truncatula HOM05D000099 ORTHO05D000205 2.5e-22 109.0 115 59.1
Lj5g0026620 Lotus japonicus HOM05D000099 ORTHO05D000205 3.3e-22 108.6 103 61.2
Medtr0052s0080 Medicago truncatula HOM05D000099 ORTHO05D000205 7.3e-22 107.5 115 58.3
Medtr0055s0090 Medicago truncatula HOM05D000099 ORTHO05D000205 7.3e-22 107.5 115 58.3
Medtr0052s0040 Medicago truncatula HOM05D003742 ORTHO05D003742 1.6e-21 106.3 115 58.3
arahy.Tifrunner.gnm1.ann1.I39KNR Arachis hypogaea HOM05D000099 ORTHO05D002060 4.7e-21 104.8 154 51.3
Lj5g0002401 Lotus japonicus HOM05D000099 ORTHO05D000205 4.0e-20 101.7 98 61.2
LjContig00097g0009783 Lotus japonicus HOM05D000099 ORTHO05D000205 4.0e-20 101.7 98 61.2
Ca_14815_v3 Cicer arietinum L. HOM05D000099 ORTHO05D003742 5.2e-20 101.3 116 55.2
Lj6g0006246 Lotus japonicus HOM05D000099 ORTHO05D012354 6.8e-20 100.9 104 61.5
LjContig00371g0023897 Lotus japonicus HOM05D000099 ORTHO05D012354 6.8e-20 100.9 104 61.5
arahy.Tifrunner.gnm1.ann1.53JK9N Arachis hypogaea HOM05D001819 ORTHO05D001730 1.7e-18 96.3 131 47.3
Medtr0152s0090 Medicago truncatula HOM05D000099 ORTHO05D000205 2.2e-18 95.9 115 56.5
LjContig00371g0011613 Lotus japonicus HOM05D000099 ORTHO05D000205 2.3e-15 85.9 90 57.8
Medtr0515s0020 Medicago truncatula HOM05D000099 ORTHO05D000205 1.2e-13 80.1 44 90.9
CAN.G1723.6 Capsicum annuum HOM05D000099 ORTHO05D016138 3.6e-13 78.6 67 65.7
CAN.G1730.7 Capsicum annuum HOM05D000099 ORTHO05D016138 3.6e-13 78.6 67 65.7
CBR_g48878 Chara braunii HOM05D000099 ORTHO05D012354 4.0e-12 75.1 58 65.5
CDE02G1552 Ceratophyllum demersum HOM05D001819 ORTHO05D001730 5.8e-11 71.2 96 53.1
arahy.Tifrunner.gnm1.ann1.79UM6A Arachis hypogaea HOM05D000099 ORTHO05D003742 7.5e-11 70.9 45 80.0
Sc21g0003440 Simmondsia chinensis HOM05D000099 ORTHO05D012354 4.9e-10 68.2 43 76.7
CDE02G0156 Ceratophyllum demersum HOM05D027566 ORTHO05D012354 1.9e-09 66.2 121 43.0
CBR_g64711 Chara braunii HOM05D000099 ORTHO05D012354 5.4e-09 64.7 32 96.9
unitig_646.g29568 Utricularia gibba HOM05D001819 ORTHO05D001730 9.2e-09 63.9 88 48.9
CAN.G1991.4 Capsicum annuum HOM05D000099 ORTHO05D002060 6.0e-08 61.2 46 67.4
unitig_134.g35510 Utricularia gibba HOM05D000099 ORTHO05D002060 1.1e-06 57.0 39 76.9
Nn154s44276 Nelumbo nucifera HOM05D001819 ORTHO05D001730 1.9e-06 56.2 53 56.6
unitig_783.g29411 Utricularia gibba HOM05D001819 ORTHO05D001730 5.6e-06 54.7 39 76.9
ScUNg0001500 Simmondsia chinensis HOM05D000099 ORTHO05D002047 9.5e-06 53.9 46 60.9


User provided reference genes

Program Settings